RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 ST20-MTHFSA0A0A6YYL1 179 aa13.98□□□□□ -0.17
RNF43-207ENST00000583753 TSPY4P0CV99 314 aa13.98□□□□□ -0.17
RNF43-207ENST00000583753 TSPY10P0CW01 314 aa13.98□□□□□ -0.17
RNF43-207ENST00000583753 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
RNF43-207ENST00000583753 PDE4AP27815 886 aa13.97□□□□□ -0.17
RNF43-207ENST00000583753 WDR43Q15061 677 aaKnown RBP eCLIP13.96□□□□□ -0.17
RNF43-207ENST00000583753 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.17
RNF43-207ENST00000583753 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
RNF43-207ENST00000583753 CFTRP13569 1480 aa13.95□□□□□ -0.18
RNF43-207ENST00000583753 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
RNF43-207ENST00000583753 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
RNF43-207ENST00000583753 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.189e-8■■■■□ 23.6
RNF43-207ENST00000583753 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
RNF43-207ENST00000583753 RRP1P56182 461 aaKnown RBP13.92□□□□□ -0.18
RNF43-207ENST00000583753 NCOA2Q15596 1464 aa13.91□□□□□ -0.18
RNF43-207ENST00000583753 NAIPQ13075 1403 aa13.91□□□□□ -0.18
RNF43-207ENST00000583753 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
RNF43-207ENST00000583753 USP47Q96K76 1375 aa13.91□□□□□ -0.18
RNF43-207ENST00000583753 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
RNF43-207ENST00000583753 SPRYD3Q8NCJ5 442 aa13.9□□□□□ -0.18
RNF43-207ENST00000583753 CRBNQ96SW2 442 aa13.9□□□□□ -0.18
RNF43-207ENST00000583753 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
RNF43-207ENST00000583753 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
RNF43-207ENST00000583753 CASKIN1Q8WXD9 1431 aa13.88□□□□□ -0.19
RNF43-207ENST00000583753 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
RNF43-207ENST00000583753 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
RNF43-207ENST00000583753 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
RNF43-207ENST00000583753 NUP155O75694 1391 aa13.87□□□□□ -0.19
RNF43-207ENST00000583753 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
RNF43-207ENST00000583753 BRPF3Q9ULD4 1205 aa13.86□□□□□ -0.19
RNF43-207ENST00000583753 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
RNF43-207ENST00000583753 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
RNF43-207ENST00000583753 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
RNF43-207ENST00000583753 CCDC146Q8IYE0 955 aa13.85□□□□□ -0.19
RNF43-207ENST00000583753 PLEKHD1A6NEE1 506 aa13.84□□□□□ -0.19
RNF43-207ENST00000583753 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
RNF43-207ENST00000583753 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.19
RNF43-207ENST00000583753 KNSTRNQ9Y448 316 aa13.83□□□□□ -0.19
RNF43-207ENST00000583753 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
RNF43-207ENST00000583753 ROCK2O75116 1388 aaKnown RBP13.82□□□□□ -0.2
RNF43-207ENST00000583753 HNRNPMP52272 730 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■□□ 19.1
RNF43-207ENST00000583753 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
RNF43-207ENST00000583753 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
RNF43-207ENST00000583753 MYBBP1AQ9BQG0 1328 aaKnown RBP13.81□□□□□ -0.2
RNF43-207ENST00000583753 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
RNF43-207ENST00000583753 RALBP1Q15311 655 aa13.8□□□□□ -0.2
RNF43-207ENST00000583753 PANK3Q9H999 370 aa13.8□□□□□ -0.2
RNF43-207ENST00000583753 NESP48681 1621 aa13.79□□□□□ -0.2
RNF43-207ENST00000583753 GZF1Q9H116 711 aaPredicted RBP13.78□□□□□ -0.2
RNF43-207ENST00000583753 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.2
RNF43-207ENST00000583753 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.2
RNF43-207ENST00000583753 KIF15Q9NS87 1388 aa13.77□□□□□ -0.21
RNF43-207ENST00000583753 UPF2Q9HAU5 1272 aaKnown RBP13.77□□□□□ -0.21
RNF43-207ENST00000583753 GSE1Q14687 1217 aa13.76□□□□□ -0.21
RNF43-207ENST00000583753 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
RNF43-207ENST00000583753 NBPF1Q3BBV0 1214 aa13.76□□□□□ -0.21
RNF43-207ENST00000583753 C20orf194Q5TEA3 1177 aa13.76□□□□□ -0.21
RNF43-207ENST00000583753 BACH2Q9BYV9 841 aa13.76□□□□□ -0.21
RNF43-207ENST00000583753 SMG6Q86US8 1419 aaKnown RBP13.75□□□□□ -0.21
RNF43-207ENST00000583753 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
RNF43-207ENST00000583753 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
RNF43-207ENST00000583753 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
RNF43-207ENST00000583753 TMF1P82094 1093 aa13.73□□□□□ -0.21
RNF43-207ENST00000583753 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
RNF43-207ENST00000583753 PTPN23Q9H3S7 1636 aa13.73□□□□□ -0.21
RNF43-207ENST00000583753 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
RNF43-207ENST00000583753 BCL2L13Q9BXK5 485 aa13.72□□□□□ -0.21
RNF43-207ENST00000583753 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
RNF43-207ENST00000583753 HSP90AA1P07900 732 aaKnown RBP13.71□□□□□ -0.21
RNF43-207ENST00000583753 ADAMTS8Q9UP79 889 aa13.71□□□□□ -0.21
RNF43-207ENST00000583753 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
RNF43-207ENST00000583753 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
RNF43-207ENST00000583753 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
RNF43-207ENST00000583753 CDK13Q14004 1512 aaKnown RBP13.7□□□□□ -0.22
RNF43-207ENST00000583753 MAP3K1Q13233 1512 aa13.7□□□□□ -0.22
RNF43-207ENST00000583753 GAPVD1Q14C86 1478 aa13.7□□□□□ -0.22
RNF43-207ENST00000583753 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.22
RNF43-207ENST00000583753 BECN1Q14457 450 aa13.69□□□□□ -0.22
RNF43-207ENST00000583753 ANKRD30AQ9BXX3 1397 aa13.69□□□□□ -0.22
RNF43-207ENST00000583753 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
RNF43-207ENST00000583753 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
RNF43-207ENST00000583753 NAP1L5Q96NT1 182 aaPredicted RBP13.68□□□□□ -0.22
RNF43-207ENST00000583753 APAF1O14727 1248 aa13.68□□□□□ -0.22
RNF43-207ENST00000583753 USP35Q9P2H5 1018 aa13.67□□□□□ -0.22
RNF43-207ENST00000583753 COG6Q9Y2V7 657 aa13.67□□□□□ -0.22
RNF43-207ENST00000583753 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
RNF43-207ENST00000583753 MS4A1P11836 297 aa13.66□□□□□ -0.22
RNF43-207ENST00000583753 BCAR3O75815 825 aa13.63□□□□□ -0.23
RNF43-207ENST00000583753 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
RNF43-207ENST00000583753 CENPQQ7L2Z9 268 aaPredicted RBP13.63□□□□□ -0.23
RNF43-207ENST00000583753 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
RNF43-207ENST00000583753 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNF43-207ENST00000583753 PANK1Q8TE04 598 aa13.62□□□□□ -0.23
RNF43-207ENST00000583753 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
RNF43-207ENST00000583753 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
RNF43-207ENST00000583753 FTSJ3Q8IY81 847 aaKnown RBP13.61□□□□□ -0.23
RNF43-207ENST00000583753 DAPK1P53355 1430 aa13.61□□□□□ -0.23
RNF43-207ENST00000583753 ANKRD50Q9ULJ7 1429 aa13.6□□□□□ -0.23
RNF43-207ENST00000583753 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
RNF43-207ENST00000583753 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms