RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
NUP85-221ENST00000583548 UBAP1LF5GYI3 381 aa11.14□□□□□ -0.63
NUP85-221ENST00000583548 ATP10AO60312 1499 aa11.12□□□□□ -0.63
NUP85-221ENST00000583548 SIGLEC1Q9BZZ2 1709 aa11.12□□□□□ -0.63
NUP85-221ENST00000583548 C9orf84Q5VXU9 1444 aa11.12□□□□□ -0.63
NUP85-221ENST00000583548 CEBPAP49715 358 aaPredicted RBP11.12□□□□□ -0.63
NUP85-221ENST00000583548 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
NUP85-221ENST00000583548 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
NUP85-221ENST00000583548 HECW1Q76N89 1606 aa11.11□□□□□ -0.63
NUP85-221ENST00000583548 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
NUP85-221ENST00000583548 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
NUP85-221ENST00000583548 PLEKHD1A6NEE1 506 aa11.09□□□□□ -0.63
NUP85-221ENST00000583548 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
NUP85-221ENST00000583548 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
NUP85-221ENST00000583548 TRAPPC8Q9Y2L5 1435 aa11.07□□□□□ -0.64
NUP85-221ENST00000583548 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
NUP85-221ENST00000583548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUP85-221ENST00000583548 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
NUP85-221ENST00000583548 NUP153P49790 1475 aaKnown RBP11.04□□□□□ -0.64
NUP85-221ENST00000583548 HSPA1LP34931 641 aa11.03□□□□□ -0.64
NUP85-221ENST00000583548 ZNF335Q9H4Z2 1342 aaPredicted RBP11.03□□□□□ -0.64
NUP85-221ENST00000583548 C3P01024 1663 aa11.02□□□□□ -0.64
NUP85-221ENST00000583548 TOM1O60784 492 aa11.02□□□□□ -0.65
NUP85-221ENST00000583548 SCAF1Q9H7N4 1312 aaKnown RBP11.02□□□□□ -0.65
NUP85-221ENST00000583548 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.65
NUP85-221ENST00000583548 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
NUP85-221ENST00000583548 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
NUP85-221ENST00000583548 PKD2Q13563 968 aa11.01□□□□□ -0.65
NUP85-221ENST00000583548 REREQ9P2R6 1566 aa11.01□□□□□ -0.65
NUP85-221ENST00000583548 PLCH2O75038 1416 aa11.01□□□□□ -0.65
NUP85-221ENST00000583548 SAMD9Q5K651 1589 aa11□□□□□ -0.65
NUP85-221ENST00000583548 NPATQ14207 1427 aa11□□□□□ -0.65
NUP85-221ENST00000583548 PRXQ9BXM0 1461 aa11□□□□□ -0.65
NUP85-221ENST00000583548 AGLP35573 1532 aa10.99□□□□□ -0.65
NUP85-221ENST00000583548 EFCAB2Q5VUJ9 269 aa10.99□□□□□ -0.65
NUP85-221ENST00000583548 PLA2R1Q13018 1463 aa10.99□□□□□ -0.65
NUP85-221ENST00000583548 PIP4K2BP78356 416 aa10.97□□□□□ -0.65
NUP85-221ENST00000583548 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
NUP85-221ENST00000583548 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
NUP85-221ENST00000583548 KDM5CP41229 1560 aa10.95□□□□□ -0.66
NUP85-221ENST00000583548 CPS1P31327 1500 aa10.95□□□□□ -0.66
NUP85-221ENST00000583548 PPP6R1Q9UPN7 881 aa10.95□□□□□ -0.66
NUP85-221ENST00000583548 DIP2CQ9Y2E4 1556 aa10.94□□□□□ -0.66
NUP85-221ENST00000583548 PTPRKQ15262 1439 aa10.94□□□□□ -0.66
NUP85-221ENST00000583548 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
NUP85-221ENST00000583548 MROH2AA6NES4 1674 aa10.92□□□□□ -0.66
NUP85-221ENST00000583548 MLH3Q9UHC1 1453 aa10.92□□□□□ -0.66
NUP85-221ENST00000583548 MYO5CQ9NQX4 1742 aa10.91□□□□□ -0.66
NUP85-221ENST00000583548 ZNF142P52746 1687 aaPredicted RBP10.91□□□□□ -0.66
NUP85-221ENST00000583548 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
NUP85-221ENST00000583548 ABCA6Q8N139 1617 aa10.89□□□□□ -0.67
NUP85-221ENST00000583548 CEP170BQ9Y4F5 1589 aaPredicted RBP10.89□□□□□ -0.67
NUP85-221ENST00000583548 ZMYM3Q14202 1370 aa10.89□□□□□ -0.67
NUP85-221ENST00000583548 SUPT6HQ7KZ85 1726 aaKnown RBP10.88□□□□□ -0.67
NUP85-221ENST00000583548 CDK11AQ9UQ88 783 aaPredicted RBP10.88□□□□□ -0.67
NUP85-221ENST00000583548 ARHGAP5Q13017 1502 aa10.88□□□□□ -0.67
NUP85-221ENST00000583548 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
NUP85-221ENST00000583548 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
NUP85-221ENST00000583548 CDK13Q14004 1512 aaKnown RBP10.84□□□□□ -0.67
NUP85-221ENST00000583548 KIF14Q15058 1648 aa10.84□□□□□ -0.67
NUP85-221ENST00000583548 RGS17Q9UGC6 210 aaPredicted RBP10.83□□□□□ -0.68
NUP85-221ENST00000583548 A2ML1A8K2U0 1454 aa10.82□□□□□ -0.68
NUP85-221ENST00000583548 CLIP1P30622 1438 aa10.82□□□□□ -0.68
NUP85-221ENST00000583548 POLR1AO95602 1720 aaPredicted RBP10.8□□□□□ -0.68
NUP85-221ENST00000583548 ABCC1P33527 1531 aa10.79□□□□□ -0.68
NUP85-221ENST00000583548 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
NUP85-221ENST00000583548 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
NUP85-221ENST00000583548 KIDINS220Q9ULH0 1771 aa10.79□□□□□ -0.68
NUP85-221ENST00000583548 DNMT1P26358 1616 aaKnown RBP10.79□□□□□ -0.68
NUP85-221ENST00000583548 ALKQ9UM73 1620 aa10.79□□□□□ -0.68
NUP85-221ENST00000583548 RNF17Q9BXT8 1623 aaKnown RBP10.78□□□□□ -0.68
NUP85-221ENST00000583548 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
NUP85-221ENST00000583548 CLTCQ00610 1675 aaKnown RBP10.78□□□□□ -0.68
NUP85-221ENST00000583548 NEURL4Q96JN8 1562 aa10.77□□□□□ -0.68
NUP85-221ENST00000583548 CSRNP3Q8WYN3 585 aa10.77□□□□□ -0.69
NUP85-221ENST00000583548 VWDEQ8N2E2 1590 aa10.77□□□□□ -0.69
NUP85-221ENST00000583548 ITSN2Q9NZM3 1697 aa10.76□□□□□ -0.69
NUP85-221ENST00000583548 POTEAQ6S8J7 498 aa10.76□□□□□ -0.69
NUP85-221ENST00000583548 SENP3Q9H4L4 574 aaPredicted RBP10.76□□□□□ -0.69
NUP85-221ENST00000583548 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
NUP85-221ENST00000583548 SYNMO15061 1565 aa10.75□□□□□ -0.69
NUP85-221ENST00000583548 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
NUP85-221ENST00000583548 PREX2Q70Z35 1606 aa10.74□□□□□ -0.69
NUP85-221ENST00000583548 THEMISQ8N1K5 641 aaPredicted RBP10.74□□□□□ -0.69
NUP85-221ENST00000583548 NPHP4O75161 1426 aaPredicted RBP10.74□□□□□ -0.69
NUP85-221ENST00000583548 MED14O60244 1454 aa10.74□□□□□ -0.69
NUP85-221ENST00000583548 CDC42BPBQ9Y5S2 1711 aa10.73□□□□□ -0.69
NUP85-221ENST00000583548 SPAG9O60271 1321 aaKnown RBP10.73□□□□□ -0.69
NUP85-221ENST00000583548 LRRC7Q96NW7 1537 aa10.73□□□□□ -0.69
NUP85-221ENST00000583548 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
NUP85-221ENST00000583548 DEPDC5O75140 1603 aa10.73□□□□□ -0.69
NUP85-221ENST00000583548 GGT6Q6P531 493 aa10.72□□□□□ -0.69
NUP85-221ENST00000583548 A2MP01023 1474 aa10.72□□□□□ -0.69
NUP85-221ENST00000583548 PLXNC1O60486 1568 aa10.72□□□□□ -0.69
NUP85-221ENST00000583548 TNRQ92752 1358 aa10.71□□□□□ -0.69
NUP85-221ENST00000583548 ATP7AQ04656 1500 aa10.7□□□□□ -0.7
NUP85-221ENST00000583548 FAM135AQ9P2D6 1515 aa10.7□□□□□ -0.7
NUP85-221ENST00000583548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.7□□□□□ -0.7
NUP85-221ENST00000583548 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
NUP85-221ENST00000583548 NLRP1Q9C000 1473 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms