RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 ARHGEF12Q9NZN5 1544 aa16.07■□□□□ 0.16
GGA3-212ENST00000582376 CFAP74Q9C0B2 1584 aa16.07■□□□□ 0.16
GGA3-212ENST00000582376 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
GGA3-212ENST00000582376 RAPGEF6Q8TEU7 1601 aa16.04■□□□□ 0.16
GGA3-212ENST00000582376 HECW1Q76N89 1606 aa16.02■□□□□ 0.16
GGA3-212ENST00000582376 ATP10AO60312 1499 aa16■□□□□ 0.15
GGA3-212ENST00000582376 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
GGA3-212ENST00000582376 C9orf84Q5VXU9 1444 aa16■□□□□ 0.15
GGA3-212ENST00000582376 SETD1BQ9UPS6 1966 aaKnown RBP15.99■□□□□ 0.15
GGA3-212ENST00000582376 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.98■□□□□ 0.15
GGA3-212ENST00000582376 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
GGA3-212ENST00000582376 UBAP1LF5GYI3 381 aa15.97■□□□□ 0.15
GGA3-212ENST00000582376 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
GGA3-212ENST00000582376 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.15
GGA3-212ENST00000582376 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
GGA3-212ENST00000582376 NCOA1Q15788 1441 aa15.92■□□□□ 0.14
GGA3-212ENST00000582376 MED1Q15648 1581 aaPredicted RBP15.88■□□□□ 0.13
GGA3-212ENST00000582376 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
GGA3-212ENST00000582376 PLCH2O75038 1416 aa15.87■□□□□ 0.13
GGA3-212ENST00000582376 C3P01024 1663 aa15.87■□□□□ 0.13
GGA3-212ENST00000582376 ESF1Q9H501 851 aaKnown RBP15.87■□□□□ 0.13
GGA3-212ENST00000582376 ZNF335Q9H4Z2 1342 aaPredicted RBP15.87■□□□□ 0.13
GGA3-212ENST00000582376 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
GGA3-212ENST00000582376 MYT1LQ9UL68 1186 aa15.84■□□□□ 0.13
GGA3-212ENST00000582376 CAMSAP1Q5T5Y3 1602 aa15.83■□□□□ 0.13
GGA3-212ENST00000582376 HSPA1LP34931 641 aa15.82■□□□□ 0.12
GGA3-212ENST00000582376 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
GGA3-212ENST00000582376 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
GGA3-212ENST00000582376 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
GGA3-212ENST00000582376 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
GGA3-212ENST00000582376 REREQ9P2R6 1566 aa15.8■□□□□ 0.12
GGA3-212ENST00000582376 DIP2CQ9Y2E4 1556 aa15.79■□□□□ 0.12
GGA3-212ENST00000582376 RANGAP1P46060 587 aaPredicted RBP15.79■□□□□ 0.12
GGA3-212ENST00000582376 AFAP1Q8N556 730 aa15.79■□□□□ 0.12
GGA3-212ENST00000582376 KDM5CP41229 1560 aa15.79■□□□□ 0.12
GGA3-212ENST00000582376 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
GGA3-212ENST00000582376 AGLP35573 1532 aa15.78■□□□□ 0.12
GGA3-212ENST00000582376 PIP4K2BP78356 416 aa15.77■□□□□ 0.12
GGA3-212ENST00000582376 PKD2Q13563 968 aa15.77■□□□□ 0.12
GGA3-212ENST00000582376 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
GGA3-212ENST00000582376 NPATQ14207 1427 aa15.76■□□□□ 0.11
GGA3-212ENST00000582376 MYO5CQ9NQX4 1742 aa15.75■□□□□ 0.11
GGA3-212ENST00000582376 TOM1O60784 492 aa15.74■□□□□ 0.11
GGA3-212ENST00000582376 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
GGA3-212ENST00000582376 PLA2R1Q13018 1463 aa15.72■□□□□ 0.11
GGA3-212ENST00000582376 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
GGA3-212ENST00000582376 MLH3Q9UHC1 1453 aa15.71■□□□□ 0.11
GGA3-212ENST00000582376 ARHGAP5Q13017 1502 aa15.71■□□□□ 0.11
GGA3-212ENST00000582376 TCOF1Q13428 1488 aaKnown RBP15.7■□□□□ 0.1
GGA3-212ENST00000582376 ZMYM3Q14202 1370 aa15.69■□□□□ 0.1
GGA3-212ENST00000582376 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
GGA3-212ENST00000582376 MROH2AA6NES4 1674 aa15.67■□□□□ 0.1
GGA3-212ENST00000582376 ZNF142P52746 1687 aaPredicted RBP15.67■□□□□ 0.1
GGA3-212ENST00000582376 CDK11AQ9UQ88 783 aaPredicted RBP15.66■□□□□ 0.1
GGA3-212ENST00000582376 CPS1P31327 1500 aa15.65■□□□□ 0.1
GGA3-212ENST00000582376 CEP170BQ9Y4F5 1589 aaPredicted RBP15.65■□□□□ 0.1
GGA3-212ENST00000582376 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
GGA3-212ENST00000582376 KIF14Q15058 1648 aa15.65■□□□□ 0.1
GGA3-212ENST00000582376 MYO3AQ8NEV4 1616 aa15.65■□□□□ 0.1
GGA3-212ENST00000582376 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
GGA3-212ENST00000582376 PTPRKQ15262 1439 aa15.61■□□□□ 0.09
GGA3-212ENST00000582376 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
GGA3-212ENST00000582376 CLIP1P30622 1438 aa15.6■□□□□ 0.09
GGA3-212ENST00000582376 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
GGA3-212ENST00000582376 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
GGA3-212ENST00000582376 ABCC1P33527 1531 aa15.59■□□□□ 0.09
GGA3-212ENST00000582376 ITSN2Q9NZM3 1697 aa15.57■□□□□ 0.08
GGA3-212ENST00000582376 CLTCQ00610 1675 aaKnown RBP15.57■□□□□ 0.08
GGA3-212ENST00000582376 CDC42BPBQ9Y5S2 1711 aa15.57■□□□□ 0.08
GGA3-212ENST00000582376 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
GGA3-212ENST00000582376 RGS17Q9UGC6 210 aaPredicted RBP15.56■□□□□ 0.08
GGA3-212ENST00000582376 A2ML1A8K2U0 1454 aa15.55■□□□□ 0.08
GGA3-212ENST00000582376 ALKQ9UM73 1620 aa15.54■□□□□ 0.08
GGA3-212ENST00000582376 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
GGA3-212ENST00000582376 DNMT1P26358 1616 aaKnown RBP15.53■□□□□ 0.08
GGA3-212ENST00000582376 PREX2Q70Z35 1606 aa15.53■□□□□ 0.08
GGA3-212ENST00000582376 NEURL4Q96JN8 1562 aa15.52■□□□□ 0.07
GGA3-212ENST00000582376 POLR1AO95602 1720 aaPredicted RBP15.51■□□□□ 0.07
GGA3-212ENST00000582376 SAMD9LQ8IVG5 1584 aa15.5■□□□□ 0.07
GGA3-212ENST00000582376 GGT6Q6P531 493 aa15.5■□□□□ 0.07
GGA3-212ENST00000582376 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
GGA3-212ENST00000582376 SPAG9O60271 1321 aaKnown RBP15.49■□□□□ 0.07
GGA3-212ENST00000582376 ANKLE2Q86XL3 938 aa15.48■□□□□ 0.07
GGA3-212ENST00000582376 EEA1Q15075 1411 aa15.48■□□□□ 0.07
GGA3-212ENST00000582376 A2MP01023 1474 aa15.46■□□□□ 0.07
GGA3-212ENST00000582376 PLXNC1O60486 1568 aa15.46■□□□□ 0.07
GGA3-212ENST00000582376 POTEAQ6S8J7 498 aa15.45■□□□□ 0.06
GGA3-212ENST00000582376 ATP7AQ04656 1500 aa15.44■□□□□ 0.06
GGA3-212ENST00000582376 ZNF777Q9ULD5 760 aaPredicted RBP15.44■□□□□ 0.06
GGA3-212ENST00000582376 NPHP4O75161 1426 aaPredicted RBP15.43■□□□□ 0.06
GGA3-212ENST00000582376 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
GGA3-212ENST00000582376 TNRQ92752 1358 aa15.43■□□□□ 0.06
GGA3-212ENST00000582376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.43■□□□□ 0.06
GGA3-212ENST00000582376 LRRC7Q96NW7 1537 aa15.43■□□□□ 0.06
GGA3-212ENST00000582376 SYCP2Q9BX26 1530 aa15.43■□□□□ 0.06
GGA3-212ENST00000582376 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.06
GGA3-212ENST00000582376 MED14O60244 1454 aa15.41■□□□□ 0.06
GGA3-212ENST00000582376 CDC42BPAQ5VT25 1732 aa15.41■□□□□ 0.06
GGA3-212ENST00000582376 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
GGA3-212ENST00000582376 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms