RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 ZNF644Q9H582 1327 aaPredicted RBP17.26■□□□□ 0.35
RTTN-207ENST00000581583 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
RTTN-207ENST00000581583 ITSN2Q9NZM3 1697 aa17.24■□□□□ 0.35
RTTN-207ENST00000581583 ATP10BO94823 1461 aa17.24■□□□□ 0.35
RTTN-207ENST00000581583 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
RTTN-207ENST00000581583 PTPRGP23470 1445 aa17.23■□□□□ 0.35
RTTN-207ENST00000581583 DENND4BO75064 1496 aaPredicted RBP17.23■□□□□ 0.35
RTTN-207ENST00000581583 CAMSAP2Q08AD1 1489 aa17.22■□□□□ 0.35
RTTN-207ENST00000581583 KDM6BO15054 1643 aa17.22■□□□□ 0.35
RTTN-207ENST00000581583 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
RTTN-207ENST00000581583 KIF14Q15058 1648 aa17.21■□□□□ 0.35
RTTN-207ENST00000581583 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
RTTN-207ENST00000581583 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
RTTN-207ENST00000581583 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
RTTN-207ENST00000581583 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
RTTN-207ENST00000581583 CHD1O14646 1710 aa17.15■□□□□ 0.34
RTTN-207ENST00000581583 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
RTTN-207ENST00000581583 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
RTTN-207ENST00000581583 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.33
RTTN-207ENST00000581583 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
RTTN-207ENST00000581583 ANKRD30BQ9BXX2 1392 aa17.12■□□□□ 0.33
RTTN-207ENST00000581583 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
RTTN-207ENST00000581583 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
RTTN-207ENST00000581583 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
RTTN-207ENST00000581583 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
RTTN-207ENST00000581583 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
RTTN-207ENST00000581583 CROCC2H7BZ55 1655 aa17.09■□□□□ 0.33
RTTN-207ENST00000581583 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.33
RTTN-207ENST00000581583 TSPY4P0CV99 314 aa17.06■□□□□ 0.32
RTTN-207ENST00000581583 TSPY10P0CW01 314 aa17.06■□□□□ 0.32
RTTN-207ENST00000581583 FOXD1Q16676 465 aa17.06■□□□□ 0.32
RTTN-207ENST00000581583 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
RTTN-207ENST00000581583 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
RTTN-207ENST00000581583 HIRIP3Q9BW71 556 aaPredicted RBP17.06■□□□□ 0.32
RTTN-207ENST00000581583 PZPP20742 1482 aa17.05■□□□□ 0.32
RTTN-207ENST00000581583 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
RTTN-207ENST00000581583 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
RTTN-207ENST00000581583 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
RTTN-207ENST00000581583 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
RTTN-207ENST00000581583 MBD5Q9P267 1494 aa17.02■□□□□ 0.32
RTTN-207ENST00000581583 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
RTTN-207ENST00000581583 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
RTTN-207ENST00000581583 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
RTTN-207ENST00000581583 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
RTTN-207ENST00000581583 EIF4G2P78344 907 aaKnown RBP eCLIP16.99■□□□□ 0.31
RTTN-207ENST00000581583 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
RTTN-207ENST00000581583 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
RTTN-207ENST00000581583 CCDC141Q6ZP82 1450 aa16.97■□□□□ 0.31
RTTN-207ENST00000581583 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
RTTN-207ENST00000581583 ANP32CO43423 234 aa16.97■□□□□ 0.31
RTTN-207ENST00000581583 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
RTTN-207ENST00000581583 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
RTTN-207ENST00000581583 PKD2Q13563 968 aa16.96■□□□□ 0.31
RTTN-207ENST00000581583 SAMD9LQ8IVG5 1584 aa16.96■□□□□ 0.31
RTTN-207ENST00000581583 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
RTTN-207ENST00000581583 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
RTTN-207ENST00000581583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.3
RTTN-207ENST00000581583 NUP155O75694 1391 aa16.95■□□□□ 0.3
RTTN-207ENST00000581583 KDM5DQ9BY66 1539 aa16.94■□□□□ 0.3
RTTN-207ENST00000581583 PLEKHH2Q8IVE3 1493 aa16.93■□□□□ 0.3
RTTN-207ENST00000581583 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
RTTN-207ENST00000581583 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
RTTN-207ENST00000581583 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
RTTN-207ENST00000581583 TTC37Q6PGP7 1564 aa16.91■□□□□ 0.3
RTTN-207ENST00000581583 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
RTTN-207ENST00000581583 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
RTTN-207ENST00000581583 PLCH2O75038 1416 aa16.88■□□□□ 0.29
RTTN-207ENST00000581583 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
RTTN-207ENST00000581583 SPATA31E1Q6ZUB1 1445 aa16.87■□□□□ 0.29
RTTN-207ENST00000581583 MYO5CQ9NQX4 1742 aa16.86■□□□□ 0.29
RTTN-207ENST00000581583 ZCCHC11Q5TAX3 1644 aaKnown RBP16.86■□□□□ 0.29
RTTN-207ENST00000581583 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
RTTN-207ENST00000581583 UHRF1BP1Q6BDS2 1440 aa16.82■□□□□ 0.28
RTTN-207ENST00000581583 CCDC7Q96M83 1385 aa16.82■□□□□ 0.28
RTTN-207ENST00000581583 PLXNC1O60486 1568 aa16.82■□□□□ 0.28
RTTN-207ENST00000581583 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
RTTN-207ENST00000581583 FAM135AQ9P2D6 1515 aa16.81■□□□□ 0.28
RTTN-207ENST00000581583 C11orf95C9JLR9 678 aaPredicted RBP16.8■□□□□ 0.28
RTTN-207ENST00000581583 CNTLNQ9NXG0 1405 aa16.8■□□□□ 0.28
RTTN-207ENST00000581583 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
RTTN-207ENST00000581583 DUOX2Q9NRD8 1548 aa16.78■□□□□ 0.28
RTTN-207ENST00000581583 UNC13BO14795 1591 aa16.78■□□□□ 0.28
RTTN-207ENST00000581583 ERBINQ96RT1 1412 aa16.77■□□□□ 0.27
RTTN-207ENST00000581583 ABCC1P33527 1531 aa16.76■□□□□ 0.27
RTTN-207ENST00000581583 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
RTTN-207ENST00000581583 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
RTTN-207ENST00000581583 RALGAPBQ86X10 1494 aa16.74■□□□□ 0.27
RTTN-207ENST00000581583 USP47Q96K76 1375 aa16.74■□□□□ 0.27
RTTN-207ENST00000581583 WDR7Q9Y4E6 1490 aa16.74■□□□□ 0.27
RTTN-207ENST00000581583 RTEL1-TNFRSF6BF6WH68 1400 aa16.73■□□□□ 0.27
RTTN-207ENST00000581583 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
RTTN-207ENST00000581583 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
RTTN-207ENST00000581583 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
RTTN-207ENST00000581583 MAGI2Q86UL8 1455 aa16.72■□□□□ 0.27
RTTN-207ENST00000581583 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
RTTN-207ENST00000581583 IQGAP3Q86VI3 1631 aa16.71■□□□□ 0.27
RTTN-207ENST00000581583 POLR1AO95602 1720 aaPredicted RBP16.71■□□□□ 0.27
RTTN-207ENST00000581583 DCAF11Q8TEB1 546 aa16.71■□□□□ 0.26
RTTN-207ENST00000581583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.26
RTTN-207ENST00000581583 ATP10AO60312 1499 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms