RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-209ENST00000580904 PLCB2Q00722 1185 aa12.22□□□□□ -0.45
PSMD11-209ENST00000580904 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
PSMD11-209ENST00000580904 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
PSMD11-209ENST00000580904 IER5LQ5T953 404 aa12.21□□□□□ -0.45
PSMD11-209ENST00000580904 THOC2Q8NI27 1593 aaKnown RBP12.21□□□□□ -0.46
PSMD11-209ENST00000580904 CUX1P39880 1505 aa12.21□□□□□ -0.46
PSMD11-209ENST00000580904 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
PSMD11-209ENST00000580904 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
PSMD11-209ENST00000580904 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
PSMD11-209ENST00000580904 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
PSMD11-209ENST00000580904 WDR62O43379 1518 aa12.18□□□□□ -0.46
PSMD11-209ENST00000580904 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
PSMD11-209ENST00000580904 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
PSMD11-209ENST00000580904 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
PSMD11-209ENST00000580904 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
PSMD11-209ENST00000580904 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
PSMD11-209ENST00000580904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.46
PSMD11-209ENST00000580904 C7P10643 843 aa12.14□□□□□ -0.47
PSMD11-209ENST00000580904 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
PSMD11-209ENST00000580904 SEC24BO95487 1268 aa12.13□□□□□ -0.47
PSMD11-209ENST00000580904 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
PSMD11-209ENST00000580904 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
PSMD11-209ENST00000580904 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
PSMD11-209ENST00000580904 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
PSMD11-209ENST00000580904 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
PSMD11-209ENST00000580904 PLCG2P16885 1265 aa12.1□□□□□ -0.47
PSMD11-209ENST00000580904 CUX2O14529 1486 aa12.08□□□□□ -0.48
PSMD11-209ENST00000580904 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
PSMD11-209ENST00000580904 SOGA1O94964 1423 aa12.05□□□□□ -0.48
PSMD11-209ENST00000580904 G3V3G9 751 aa12.05□□□□□ -0.48
PSMD11-209ENST00000580904 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
PSMD11-209ENST00000580904 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
PSMD11-209ENST00000580904 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
PSMD11-209ENST00000580904 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
PSMD11-209ENST00000580904 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
PSMD11-209ENST00000580904 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
PSMD11-209ENST00000580904 IFT140Q96RY7 1462 aa12.04□□□□□ -0.48
PSMD11-209ENST00000580904 RAD54L2Q9Y4B4 1467 aa12.04□□□□□ -0.48
PSMD11-209ENST00000580904 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
PSMD11-209ENST00000580904 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
PSMD11-209ENST00000580904 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
PSMD11-209ENST00000580904 ABCA10Q8WWZ4 1543 aa12.01□□□□□ -0.49
PSMD11-209ENST00000580904 WDR97A6NE52 1622 aa12□□□□□ -0.49
PSMD11-209ENST00000580904 PDCD7Q8N8D1 485 aaKnown RBP11.98□□□□□ -0.49
PSMD11-209ENST00000580904 MS4A4AQ96JQ5 239 aa11.98□□□□□ -0.49
PSMD11-209ENST00000580904 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
PSMD11-209ENST00000580904 TDRD9Q8NDG6 1382 aaKnown RBP11.96□□□□□ -0.49
PSMD11-209ENST00000580904 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
PSMD11-209ENST00000580904 ABCA5Q8WWZ7 1642 aa11.94□□□□□ -0.5
PSMD11-209ENST00000580904 COLQQ9Y215 455 aaPredicted RBP11.94□□□□□ -0.5
PSMD11-209ENST00000580904 EIF4G3O43432 1585 aaKnown RBP11.93□□□□□ -0.5
PSMD11-209ENST00000580904 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
PSMD11-209ENST00000580904 PPP1R37O75864 691 aa11.93□□□□□ -0.5
PSMD11-209ENST00000580904 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
PSMD11-209ENST00000580904 AQRO60306 1485 aaKnown RBP eCLIP11.93□□□□□ -0.5
PSMD11-209ENST00000580904 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
PSMD11-209ENST00000580904 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
PSMD11-209ENST00000580904 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
PSMD11-209ENST00000580904 EEA1Q15075 1411 aa11.9□□□□□ -0.5
PSMD11-209ENST00000580904 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
PSMD11-209ENST00000580904 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
PSMD11-209ENST00000580904 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
PSMD11-209ENST00000580904 MICALL2Q8IY33 904 aa11.87□□□□□ -0.51
PSMD11-209ENST00000580904 FAM9AQ8IZU1 332 aaPredicted RBP11.87□□□□□ -0.51
PSMD11-209ENST00000580904 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
PSMD11-209ENST00000580904 C3orf67Q6ZVT6 689 aa11.86□□□□□ -0.51
PSMD11-209ENST00000580904 IGF1RP08069 1367 aa11.86□□□□□ -0.51
PSMD11-209ENST00000580904 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
PSMD11-209ENST00000580904 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
PSMD11-209ENST00000580904 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
PSMD11-209ENST00000580904 WDR70Q9NW82 654 aa11.84□□□□□ -0.51
PSMD11-209ENST00000580904 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
PSMD11-209ENST00000580904 PDE4AP27815 886 aa11.83□□□□□ -0.52
PSMD11-209ENST00000580904 MAGI1Q96QZ7 1491 aaPredicted RBP11.82□□□□□ -0.52
PSMD11-209ENST00000580904 CUL7Q14999 1698 aa11.81□□□□□ -0.52
PSMD11-209ENST00000580904 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
PSMD11-209ENST00000580904 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
PSMD11-209ENST00000580904 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
PSMD11-209ENST00000580904 PRXQ9BXM0 1461 aa11.8□□□□□ -0.52
PSMD11-209ENST00000580904 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
PSMD11-209ENST00000580904 FHAD1B1AJZ9 1412 aa11.79□□□□□ -0.52
PSMD11-209ENST00000580904 SCUBE2Q9NQ36 999 aa11.79□□□□□ -0.52
PSMD11-209ENST00000580904 SYNJ2O15056 1496 aa11.77□□□□□ -0.52
PSMD11-209ENST00000580904 KIF21BO75037 1637 aa11.76□□□□□ -0.53
PSMD11-209ENST00000580904 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
PSMD11-209ENST00000580904 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
PSMD11-209ENST00000580904 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
PSMD11-209ENST00000580904 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
PSMD11-209ENST00000580904 GRIN2AQ12879 1464 aa11.73□□□□□ -0.53
PSMD11-209ENST00000580904 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
PSMD11-209ENST00000580904 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
PSMD11-209ENST00000580904 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
PSMD11-209ENST00000580904 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
PSMD11-209ENST00000580904 CHD1O14646 1710 aa11.72□□□□□ -0.53
PSMD11-209ENST00000580904 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
PSMD11-209ENST00000580904 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
PSMD11-209ENST00000580904 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
PSMD11-209ENST00000580904 MFSD10Q14728 455 aa11.67□□□□□ -0.54
PSMD11-209ENST00000580904 LHX8Q68G74 356 aa11.67□□□□□ -0.54
PSMD11-209ENST00000580904 NUP160Q12769 1436 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms