RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SCAPERQ9BY12 1400 aa22.5■■□□□ 1.19
CDK5RAP3-213ENST00000579605 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
CDK5RAP3-213ENST00000579605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDK5RAP3-213ENST00000579605 UHRF1BP1Q6BDS2 1440 aa22.48■■□□□ 1.19
CDK5RAP3-213ENST00000579605 CFAP74Q9C0B2 1584 aa22.47■■□□□ 1.19
CDK5RAP3-213ENST00000579605 ATP10AO60312 1499 aa22.47■■□□□ 1.19
CDK5RAP3-213ENST00000579605 SAMD9Q5K651 1589 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 PREX1Q8TCU6 1659 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 ARHGEF12Q9NZN5 1544 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 STRCQ7RTU9 1775 aa22.45■■□□□ 1.19
CDK5RAP3-213ENST00000579605 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
CDK5RAP3-213ENST00000579605 PTPRTO14522 1441 aa22.41■■□□□ 1.18
CDK5RAP3-213ENST00000579605 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
CDK5RAP3-213ENST00000579605 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
CDK5RAP3-213ENST00000579605 PLCH2O75038 1416 aa22.37■■□□□ 1.17
CDK5RAP3-213ENST00000579605 AFAP1Q8N556 730 aa22.36■■□□□ 1.17
CDK5RAP3-213ENST00000579605 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
CDK5RAP3-213ENST00000579605 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
CDK5RAP3-213ENST00000579605 UBAP1LF5GYI3 381 aa22.35■■□□□ 1.17
CDK5RAP3-213ENST00000579605 LTBP4Q8N2S1 1624 aa22.34■■□□□ 1.17
CDK5RAP3-213ENST00000579605 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
CDK5RAP3-213ENST00000579605 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.16
CDK5RAP3-213ENST00000579605 NCKAP5LQ9HCH0 1330 aa22.26■■□□□ 1.15
CDK5RAP3-213ENST00000579605 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
CDK5RAP3-213ENST00000579605 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
CDK5RAP3-213ENST00000579605 SETD1BQ9UPS6 1966 aaKnown RBP22.25■■□□□ 1.15
CDK5RAP3-213ENST00000579605 NCOA1Q15788 1441 aa22.24■■□□□ 1.15
CDK5RAP3-213ENST00000579605 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
CDK5RAP3-213ENST00000579605 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
CDK5RAP3-213ENST00000579605 C3P01024 1663 aa22.2■■□□□ 1.14
CDK5RAP3-213ENST00000579605 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
CDK5RAP3-213ENST00000579605 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
CDK5RAP3-213ENST00000579605 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
CDK5RAP3-213ENST00000579605 PIP4K2BP78356 416 aa22.15■■□□□ 1.14
CDK5RAP3-213ENST00000579605 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
CDK5RAP3-213ENST00000579605 HSPA1LP34931 641 aa22.14■■□□□ 1.13
CDK5RAP3-213ENST00000579605 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
CDK5RAP3-213ENST00000579605 KDM5CP41229 1560 aa22.12■■□□□ 1.13
CDK5RAP3-213ENST00000579605 MYO5CQ9NQX4 1742 aa22.12■■□□□ 1.13
CDK5RAP3-213ENST00000579605 CNTLNQ9NXG0 1405 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 KIF14Q15058 1648 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 ABCA6Q8N139 1617 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 MLH3Q9UHC1 1453 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 ZMYM3Q14202 1370 aa22.08■■□□□ 1.12
CDK5RAP3-213ENST00000579605 REREQ9P2R6 1566 aa22.08■■□□□ 1.12
CDK5RAP3-213ENST00000579605 PKD2Q13563 968 aa22.07■■□□□ 1.12
CDK5RAP3-213ENST00000579605 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
CDK5RAP3-213ENST00000579605 AGLP35573 1532 aa22.06■■□□□ 1.12
CDK5RAP3-213ENST00000579605 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
CDK5RAP3-213ENST00000579605 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
CDK5RAP3-213ENST00000579605 CLIP1P30622 1438 aa22.03■■□□□ 1.12
CDK5RAP3-213ENST00000579605 NPATQ14207 1427 aa22.03■■□□□ 1.12
CDK5RAP3-213ENST00000579605 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-213ENST00000579605 TOM1O60784 492 aa22.02■■□□□ 1.12
CDK5RAP3-213ENST00000579605 FMN1Q68DA7 1419 aa22■■□□□ 1.11
CDK5RAP3-213ENST00000579605 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
CDK5RAP3-213ENST00000579605 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
CDK5RAP3-213ENST00000579605 ZNF777Q9ULD5 760 aaPredicted RBP21.99■■□□□ 1.11
CDK5RAP3-213ENST00000579605 EEA1Q15075 1411 aa21.98■■□□□ 1.11
CDK5RAP3-213ENST00000579605 GGT6Q6P531 493 aa21.96■■□□□ 1.11
CDK5RAP3-213ENST00000579605 PLA2R1Q13018 1463 aa21.94■■□□□ 1.1
CDK5RAP3-213ENST00000579605 SPAG9O60271 1321 aaKnown RBP21.93■■□□□ 1.1
CDK5RAP3-213ENST00000579605 ABCC1P33527 1531 aa21.93■■□□□ 1.1
CDK5RAP3-213ENST00000579605 TCOF1Q13428 1488 aaKnown RBP21.93■■□□□ 1.1
CDK5RAP3-213ENST00000579605 KIDINS220Q9ULH0 1771 aa21.92■■□□□ 1.1
CDK5RAP3-213ENST00000579605 CDC42BPBQ9Y5S2 1711 aa21.92■■□□□ 1.1
CDK5RAP3-213ENST00000579605 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDK5RAP3-213ENST00000579605 PTPRKQ15262 1439 aa21.89■■□□□ 1.1
CDK5RAP3-213ENST00000579605 CEP170BQ9Y4F5 1589 aaPredicted RBP21.89■■□□□ 1.09
CDK5RAP3-213ENST00000579605 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
CDK5RAP3-213ENST00000579605 MROH2AA6NES4 1674 aa21.88■■□□□ 1.09
CDK5RAP3-213ENST00000579605 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
CDK5RAP3-213ENST00000579605 MYO3AQ8NEV4 1616 aa21.87■■□□□ 1.09
CDK5RAP3-213ENST00000579605 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
CDK5RAP3-213ENST00000579605 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
CDK5RAP3-213ENST00000579605 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
CDK5RAP3-213ENST00000579605 SAMD9LQ8IVG5 1584 aa21.84■■□□□ 1.09
CDK5RAP3-213ENST00000579605 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.08
CDK5RAP3-213ENST00000579605 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
CDK5RAP3-213ENST00000579605 CPS1P31327 1500 aa21.8■■□□□ 1.08
CDK5RAP3-213ENST00000579605 A2ML1A8K2U0 1454 aa21.79■■□□□ 1.08
CDK5RAP3-213ENST00000579605 A2MP01023 1474 aa21.79■■□□□ 1.08
CDK5RAP3-213ENST00000579605 FBXO31Q5XUX0 539 aaPredicted RBP21.79■■□□□ 1.08
CDK5RAP3-213ENST00000579605 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
CDK5RAP3-213ENST00000579605 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
CDK5RAP3-213ENST00000579605 LRRIQ1Q96JM4 1722 aa21.76■■□□□ 1.07
CDK5RAP3-213ENST00000579605 DNMT1P26358 1616 aaKnown RBP21.75■■□□□ 1.07
CDK5RAP3-213ENST00000579605 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
CDK5RAP3-213ENST00000579605 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
CDK5RAP3-213ENST00000579605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDK5RAP3-213ENST00000579605 CFDP1Q9UEE9 299 aaPredicted RBP21.73■■□□□ 1.07
CDK5RAP3-213ENST00000579605 TNRQ92752 1358 aa21.73■■□□□ 1.07
CDK5RAP3-213ENST00000579605 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
CDK5RAP3-213ENST00000579605 NEURL4Q96JN8 1562 aa21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 THEMISQ8N1K5 641 aaPredicted RBP21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 CCDC18Q5T9S5 1454 aa21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 GPATCH8Q9UKJ3 1502 aaKnown RBP21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
CDK5RAP3-213ENST00000579605 ALKQ9UM73 1620 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms