RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
DDX42-208ENST00000578681 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
DDX42-208ENST00000578681 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
DDX42-208ENST00000578681 HFM1A2PYH4 1435 aa22.79■■□□□ 1.24
DDX42-208ENST00000578681 PLB1Q6P1J6 1458 aa22.79■■□□□ 1.24
DDX42-208ENST00000578681 CHGAP10645 457 aaKnown RBP22.79■■□□□ 1.24
DDX42-208ENST00000578681 EHBP1L1Q8N3D4 1523 aa22.78■■□□□ 1.24
DDX42-208ENST00000578681 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
DDX42-208ENST00000578681 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
DDX42-208ENST00000578681 GRIN2AQ12879 1464 aa22.76■■□□□ 1.23
DDX42-208ENST00000578681 CTTNBP2Q8WZ74 1663 aa22.76■■□□□ 1.23
DDX42-208ENST00000578681 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
DDX42-208ENST00000578681 SUPT6HQ7KZ85 1726 aaKnown RBP22.73■■□□□ 1.23
DDX42-208ENST00000578681 HECW1Q76N89 1606 aa22.72■■□□□ 1.23
DDX42-208ENST00000578681 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
DDX42-208ENST00000578681 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
DDX42-208ENST00000578681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.7■■□□□ 1.225e-11■□□□□ 10.2
DDX42-208ENST00000578681 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
DDX42-208ENST00000578681 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
DDX42-208ENST00000578681 PTPN23Q9H3S7 1636 aa22.66■■□□□ 1.22
DDX42-208ENST00000578681 TROQ12816 1431 aaPredicted RBP22.64■■□□□ 1.21
DDX42-208ENST00000578681 SYNJ2O15056 1496 aa22.64■■□□□ 1.21
DDX42-208ENST00000578681 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
DDX42-208ENST00000578681 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
DDX42-208ENST00000578681 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
DDX42-208ENST00000578681 MIA2Q96PC5 1412 aa22.62■■□□□ 1.21
DDX42-208ENST00000578681 DAPK1P53355 1430 aa22.61■■□□□ 1.21
DDX42-208ENST00000578681 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
DDX42-208ENST00000578681 CCER2I3L3R5 266 aa22.61■■□□□ 1.21
DDX42-208ENST00000578681 EFCAB2Q5VUJ9 269 aa22.59■■□□□ 1.21
DDX42-208ENST00000578681 WASHC2AQ641Q2 1341 aa22.58■■□□□ 1.21
DDX42-208ENST00000578681 ABCC5O15440 1437 aa22.57■■□□□ 1.2
DDX42-208ENST00000578681 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
DDX42-208ENST00000578681 ANKRD50Q9ULJ7 1429 aa22.56■■□□□ 1.2
DDX42-208ENST00000578681 NUP153P49790 1475 aaKnown RBP22.56■■□□□ 1.2
DDX42-208ENST00000578681 MAGI3Q5TCQ9 1506 aa22.55■■□□□ 1.2
DDX42-208ENST00000578681 UGGT2Q9NYU1 1516 aa22.54■■□□□ 1.2
DDX42-208ENST00000578681 KIF15Q9NS87 1388 aa22.54■■□□□ 1.2
DDX42-208ENST00000578681 PBRM1Q86U86 1689 aa22.53■■□□□ 1.2
DDX42-208ENST00000578681 ARHGEF11O15085 1522 aa22.52■■□□□ 1.2
DDX42-208ENST00000578681 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
DDX42-208ENST00000578681 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
DDX42-208ENST00000578681 ST20-MTHFSA0A0A6YYL1 179 aa22.51■■□□□ 1.19
DDX42-208ENST00000578681 EIF5BO60841 1220 aaKnown RBP22.5■■□□□ 1.19
DDX42-208ENST00000578681 DISP1Q96F81 1524 aa22.5■■□□□ 1.19
DDX42-208ENST00000578681 C11orf95C9JLR9 678 aaPredicted RBP22.48■■□□□ 1.19
DDX42-208ENST00000578681 AFAP1Q8N556 730 aa22.47■■□□□ 1.19
DDX42-208ENST00000578681 WDR62O43379 1518 aa22.47■■□□□ 1.19
DDX42-208ENST00000578681 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
DDX42-208ENST00000578681 KIF3BO15066 747 aa22.46■■□□□ 1.19
DDX42-208ENST00000578681 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
DDX42-208ENST00000578681 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.18
DDX42-208ENST00000578681 CAMSAP2Q08AD1 1489 aa22.45■■□□□ 1.18
DDX42-208ENST00000578681 GGT6Q6P531 493 aa22.44■■□□□ 1.18
DDX42-208ENST00000578681 KIAA0556O60303 1618 aa22.43■■□□□ 1.18
DDX42-208ENST00000578681 KIF7Q2M1P5 1343 aa22.43■■□□□ 1.18
DDX42-208ENST00000578681 RSPH4AQ5TD94 716 aa22.43■■□□□ 1.18
DDX42-208ENST00000578681 PRKRIP1Q9H875 184 aaPredicted RBP22.43■■□□□ 1.18
DDX42-208ENST00000578681 C9orf84Q5VXU9 1444 aa22.43■■□□□ 1.18
DDX42-208ENST00000578681 CCDC184Q52MB2 194 aa22.43■■□□□ 1.18
DDX42-208ENST00000578681 USP47Q96K76 1375 aa22.42■■□□□ 1.18
DDX42-208ENST00000578681 GPATCH8Q9UKJ3 1502 aaKnown RBP22.4■■□□□ 1.18
DDX42-208ENST00000578681 RAPGEF6Q8TEU7 1601 aa22.4■■□□□ 1.18
DDX42-208ENST00000578681 ANKRD30BQ9BXX2 1392 aa22.4■■□□□ 1.18
DDX42-208ENST00000578681 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
DDX42-208ENST00000578681 CCDC7Q96M83 1385 aa22.38■■□□□ 1.17
DDX42-208ENST00000578681 ATP10BO94823 1461 aa22.38■■□□□ 1.17
DDX42-208ENST00000578681 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
DDX42-208ENST00000578681 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
DDX42-208ENST00000578681 ARHGAP5Q13017 1502 aa22.36■■□□□ 1.17
DDX42-208ENST00000578681 AKNAQ7Z591 1439 aa22.36■■□□□ 1.17
DDX42-208ENST00000578681 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
DDX42-208ENST00000578681 KIAA1107Q9UPP5 1409 aa22.33■■□□□ 1.16
DDX42-208ENST00000578681 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
DDX42-208ENST00000578681 CEP170Q5SW79 1584 aa22.31■■□□□ 1.16
DDX42-208ENST00000578681 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
DDX42-208ENST00000578681 TCOF1Q13428 1488 aaKnown RBP22.29■■□□□ 1.16
DDX42-208ENST00000578681 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
DDX42-208ENST00000578681 CCDC136Q96JN2 1154 aa22.28■■□□□ 1.16
DDX42-208ENST00000578681 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
DDX42-208ENST00000578681 TMF1P82094 1093 aa22.26■■□□□ 1.15
DDX42-208ENST00000578681 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
DDX42-208ENST00000578681 KNSTRNQ9Y448 316 aa22.26■■□□□ 1.15
DDX42-208ENST00000578681 NUP160Q12769 1436 aa22.26■■□□□ 1.15
DDX42-208ENST00000578681 ANO8Q9HCE9 1232 aaPredicted RBP22.24■■□□□ 1.15
DDX42-208ENST00000578681 KDM6BO15054 1643 aa22.24■■□□□ 1.15
DDX42-208ENST00000578681 CNTLNQ9NXG0 1405 aa22.24■■□□□ 1.15
DDX42-208ENST00000578681 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
DDX42-208ENST00000578681 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
DDX42-208ENST00000578681 KANK1Q14678 1352 aa22.23■■□□□ 1.15
DDX42-208ENST00000578681 SAFB2Q14151 953 aaKnown RBP eCLIP22.22■■□□□ 1.15
DDX42-208ENST00000578681 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
DDX42-208ENST00000578681 RPRD2Q5VT52 1461 aaKnown RBP22.21■■□□□ 1.15
DDX42-208ENST00000578681 KIF14Q15058 1648 aa22.2■■□□□ 1.14
DDX42-208ENST00000578681 MLECQ14165 292 aa22.19■■□□□ 1.14
DDX42-208ENST00000578681 PANK3Q9H999 370 aa22.17■■□□□ 1.14
DDX42-208ENST00000578681 LRRIQ1Q96JM4 1722 aa22.16■■□□□ 1.14
DDX42-208ENST00000578681 CCDC141Q6ZP82 1450 aa22.14■■□□□ 1.14
DDX42-208ENST00000578681 ESF1Q9H501 851 aaKnown RBP22.14■■□□□ 1.13
DDX42-208ENST00000578681 RTN4Q9NQC3 1192 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms