RNA–Protein interactions for RNA: ENST00000577439.1

LINC00667-201, long intergenic non-protein coding RNA 667, humanhuman

TSL 1 (best)

Gene LINC00667, Length 3,372 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00667-201ENST00000577439 FHOD3Q2V2M9 1422 aa9.07□□□□□ -0.96
LINC00667-201ENST00000577439 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
LINC00667-201ENST00000577439 SPOCK2Q92563 424 aa9.07□□□□□ -0.96
LINC00667-201ENST00000577439 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
LINC00667-201ENST00000577439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00667-201ENST00000577439 NKX1-1Q15270 411 aaPredicted RBP9.06□□□□□ -0.96
LINC00667-201ENST00000577439 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
LINC00667-201ENST00000577439 POLA1P09884 1462 aaPredicted RBP9.05□□□□□ -0.96
LINC00667-201ENST00000577439 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
LINC00667-201ENST00000577439 SNAPC4Q5SXM2 1469 aa9.05□□□□□ -0.96
LINC00667-201ENST00000577439 LRRIQ1Q96JM4 1722 aa9.05□□□□□ -0.96
LINC00667-201ENST00000577439 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
LINC00667-201ENST00000577439 SIN3AQ96ST3 1273 aa9.04□□□□□ -0.96
LINC00667-201ENST00000577439 RAD54L2Q9Y4B4 1467 aa9.04□□□□□ -0.96
LINC00667-201ENST00000577439 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
LINC00667-201ENST00000577439 SAMD9Q5K651 1589 aa9.03□□□□□ -0.96
LINC00667-201ENST00000577439 PPP1R15AO75807 674 aaPredicted RBP9.03□□□□□ -0.96
LINC00667-201ENST00000577439 FGD6Q6ZV73 1430 aa9.03□□□□□ -0.96
LINC00667-201ENST00000577439 PTPN23Q9H3S7 1636 aa9.02□□□□□ -0.97
LINC00667-201ENST00000577439 HOXD11P31277 338 aaPredicted RBP9.02□□□□□ -0.97
LINC00667-201ENST00000577439 SLC24A3Q9HC58 644 aa9.02□□□□□ -0.97
LINC00667-201ENST00000577439 FMN1Q68DA7 1419 aa9.02□□□□□ -0.97
LINC00667-201ENST00000577439 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.97
LINC00667-201ENST00000577439 ANO8Q9HCE9 1232 aaPredicted RBP9.01□□□□□ -0.97
LINC00667-201ENST00000577439 DDX10Q13206 875 aaKnown RBP9.01□□□□□ -0.97
LINC00667-201ENST00000577439 P3H3Q8IVL6 736 aa9.01□□□□□ -0.97
LINC00667-201ENST00000577439 ABCA5Q8WWZ7 1642 aa9□□□□□ -0.97
LINC00667-201ENST00000577439 HFM1A2PYH4 1435 aa9□□□□□ -0.97
LINC00667-201ENST00000577439 ZBTB7CA1YPR0 619 aa9□□□□□ -0.97
LINC00667-201ENST00000577439 UACAQ9BZF9 1416 aa8.99□□□□□ -0.97
LINC00667-201ENST00000577439 SUPT6HQ7KZ85 1726 aaKnown RBP8.99□□□□□ -0.97
LINC00667-201ENST00000577439 PTPRKQ15262 1439 aa8.98□□□□□ -0.97
LINC00667-201ENST00000577439 GRIN2BQ13224 1484 aa8.98□□□□□ -0.97
LINC00667-201ENST00000577439 CCER2I3L3R5 266 aa8.98□□□□□ -0.97
LINC00667-201ENST00000577439 ZNF428Q96B54 188 aa8.98□□□□□ -0.97
LINC00667-201ENST00000577439 EHBP1L1Q8N3D4 1523 aa8.98□□□□□ -0.97
LINC00667-201ENST00000577439 KDM5BQ9UGL1 1544 aa8.98□□□□□ -0.97
LINC00667-201ENST00000577439 MRC2Q9UBG0 1479 aa8.97□□□□□ -0.97
LINC00667-201ENST00000577439 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
LINC00667-201ENST00000577439 NCOA2Q15596 1464 aa8.97□□□□□ -0.97
LINC00667-201ENST00000577439 NESP48681 1621 aa8.97□□□□□ -0.97
LINC00667-201ENST00000577439 PDIA4P13667 645 aaKnown RBP8.96□□□□□ -0.97
LINC00667-201ENST00000577439 GCC2Q8IWJ2 1684 aa8.96□□□□□ -0.97
LINC00667-201ENST00000577439 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.97
LINC00667-201ENST00000577439 MYOM3Q5VTT5 1437 aa8.96□□□□□ -0.97
LINC00667-201ENST00000577439 ARHGEF11O15085 1522 aa8.96□□□□□ -0.98
LINC00667-201ENST00000577439 URB2Q14146 1524 aaKnown RBP8.96□□□□□ -0.98
LINC00667-201ENST00000577439 NAIPQ13075 1403 aa8.96□□□□□ -0.98
LINC00667-201ENST00000577439 TONSLQ96HA7 1378 aa8.96□□□□□ -0.98
LINC00667-201ENST00000577439 MTUS2Q5JR59 1369 aa8.95□□□□□ -0.98
LINC00667-201ENST00000577439 HECW1Q76N89 1606 aa8.95□□□□□ -0.98
LINC00667-201ENST00000577439 UGGT2Q9NYU1 1516 aa8.95□□□□□ -0.98
LINC00667-201ENST00000577439 HS6ST3Q8IZP7 471 aa8.94□□□□□ -0.98
LINC00667-201ENST00000577439 ZC3H15Q8WU90 426 aaKnown RBP8.94□□□□□ -0.98
LINC00667-201ENST00000577439 APBB1O00213 710 aa8.93□□□□□ -0.98
LINC00667-201ENST00000577439 ANP32CO43423 234 aa8.93□□□□□ -0.98
LINC00667-201ENST00000577439 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
LINC00667-201ENST00000577439 MAGI3Q5TCQ9 1506 aa8.93□□□□□ -0.98
LINC00667-201ENST00000577439 ZNF219Q9P2Y4 722 aaPredicted RBP8.92□□□□□ -0.98
LINC00667-201ENST00000577439 TCOF1Q13428 1488 aaKnown RBP8.92□□□□□ -0.98
LINC00667-201ENST00000577439 KCNV2Q8TDN2 545 aa8.92□□□□□ -0.98
LINC00667-201ENST00000577439 GAPVD1Q14C86 1478 aa8.91□□□□□ -0.98
LINC00667-201ENST00000577439 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
LINC00667-201ENST00000577439 ERCC6Q03468 1493 aa8.91□□□□□ -0.98
LINC00667-201ENST00000577439 DENND4BO75064 1496 aaPredicted RBP8.9□□□□□ -0.98
LINC00667-201ENST00000577439 AKNAQ7Z591 1439 aa8.9□□□□□ -0.98
LINC00667-201ENST00000577439 NEFLP07196 543 aa8.89□□□□□ -0.99
LINC00667-201ENST00000577439 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
LINC00667-201ENST00000577439 GPBP1L1Q9HC44 474 aaPredicted RBP8.89□□□□□ -0.99
LINC00667-201ENST00000577439 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
LINC00667-201ENST00000577439 PBRM1Q86U86 1689 aa8.89□□□□□ -0.99
LINC00667-201ENST00000577439 KDM6BO15054 1643 aa8.89□□□□□ -0.99
LINC00667-201ENST00000577439 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
LINC00667-201ENST00000577439 PDS5BQ9NTI5 1447 aa8.89□□□□□ -0.99
LINC00667-201ENST00000577439 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
LINC00667-201ENST00000577439 TDRD9Q8NDG6 1382 aaKnown RBP8.88□□□□□ -0.99
LINC00667-201ENST00000577439 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
LINC00667-201ENST00000577439 RAD21O60216 631 aa8.86□□□□□ -0.99
LINC00667-201ENST00000577439 IQGAP2Q13576 1575 aa8.86□□□□□ -0.99
LINC00667-201ENST00000577439 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
LINC00667-201ENST00000577439 UBE2Q2Q8WVN8 375 aa8.85□□□□□ -0.99
LINC00667-201ENST00000577439 ADAMTS12P58397 1594 aa8.85□□□□□ -0.99
LINC00667-201ENST00000577439 EPRSP07814 1512 aaKnown RBP8.85□□□□□ -0.99
LINC00667-201ENST00000577439 POLR1AO95602 1720 aaPredicted RBP8.85□□□□□ -0.99
LINC00667-201ENST00000577439 MTMR7Q9Y216 660 aa8.84□□□□□ -0.99
LINC00667-201ENST00000577439 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
LINC00667-201ENST00000577439 FOXD4L5Q5VV16 416 aaPredicted RBP8.84□□□□□ -0.99
LINC00667-201ENST00000577439 FOXD4L4Q8WXT5 416 aaPredicted RBP8.84□□□□□ -0.99
LINC00667-201ENST00000577439 MIA2Q96PC5 1412 aa8.84□□□□□ -0.99
LINC00667-201ENST00000577439 WASHC2AQ641Q2 1341 aa8.83□□□□□ -1
LINC00667-201ENST00000577439 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
LINC00667-201ENST00000577439 RGS22Q8NE09 1264 aa8.83□□□□□ -1
LINC00667-201ENST00000577439 CCDC136Q96JN2 1154 aa8.83□□□□□ -1
LINC00667-201ENST00000577439 CDK13Q14004 1512 aaKnown RBP8.83□□□□□ -1
LINC00667-201ENST00000577439 SALL2Q9Y467 1007 aaPredicted RBP8.82□□□□□ -1
LINC00667-201ENST00000577439 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
LINC00667-201ENST00000577439 HSPA5P11021 654 aaKnown RBP8.82□□□□□ -1
LINC00667-201ENST00000577439 CDK11BP21127 795 aaKnown RBP8.82□□□□□ -1
LINC00667-201ENST00000577439 CDK11AQ9UQ88 783 aaPredicted RBP8.82□□□□□ -1
LINC00667-201ENST00000577439 RRP7BPQ9NSQ0 103 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms