RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CFAP74Q9C0B2 1584 aa16.97■□□□□ 0.31
NPLOC4-220ENST00000576940 PLCH2O75038 1416 aa16.96■□□□□ 0.31
NPLOC4-220ENST00000576940 EFCAB5A4FU69 1503 aa16.96■□□□□ 0.31
NPLOC4-220ENST00000576940 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.3
NPLOC4-220ENST00000576940 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
NPLOC4-220ENST00000576940 ATP10AO60312 1499 aa16.93■□□□□ 0.3
NPLOC4-220ENST00000576940 EEA1Q15075 1411 aa16.93■□□□□ 0.3
NPLOC4-220ENST00000576940 FER1L4A9Z1Z3 1794 aa16.92■□□□□ 0.3
NPLOC4-220ENST00000576940 AFAP1Q8N556 730 aa16.92■□□□□ 0.3
NPLOC4-220ENST00000576940 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
NPLOC4-220ENST00000576940 ARHGEF12Q9NZN5 1544 aa16.89■□□□□ 0.29
NPLOC4-220ENST00000576940 C9orf84Q5VXU9 1444 aa16.88■□□□□ 0.29
NPLOC4-220ENST00000576940 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
NPLOC4-220ENST00000576940 ILDR2Q71H61 639 aa16.88■□□□□ 0.29
NPLOC4-220ENST00000576940 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
NPLOC4-220ENST00000576940 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
NPLOC4-220ENST00000576940 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
NPLOC4-220ENST00000576940 STRCQ7RTU9 1775 aa16.83■□□□□ 0.28
NPLOC4-220ENST00000576940 PREX1Q8TCU6 1659 aa16.83■□□□□ 0.28
NPLOC4-220ENST00000576940 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
NPLOC4-220ENST00000576940 KIF14Q15058 1648 aa16.81■□□□□ 0.28
NPLOC4-220ENST00000576940 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
NPLOC4-220ENST00000576940 UHRF1BP1Q6BDS2 1440 aa16.8■□□□□ 0.28
NPLOC4-220ENST00000576940 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
NPLOC4-220ENST00000576940 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
NPLOC4-220ENST00000576940 SETD1BQ9UPS6 1966 aaKnown RBP16.79■□□□□ 0.28
NPLOC4-220ENST00000576940 ARHGAP35Q9NRY4 1499 aa16.79■□□□□ 0.28
NPLOC4-220ENST00000576940 TROQ12816 1431 aaPredicted RBP16.78■□□□□ 0.28
NPLOC4-220ENST00000576940 SOCS7O14512 581 aa16.77■□□□□ 0.28
NPLOC4-220ENST00000576940 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-220ENST00000576940 KDM5CP41229 1560 aa16.76■□□□□ 0.27
NPLOC4-220ENST00000576940 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
NPLOC4-220ENST00000576940 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
NPLOC4-220ENST00000576940 PTPRTO14522 1441 aa16.73■□□□□ 0.27
NPLOC4-220ENST00000576940 CLIP1P30622 1438 aa16.73■□□□□ 0.27
NPLOC4-220ENST00000576940 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
NPLOC4-220ENST00000576940 C3P01024 1663 aa16.72■□□□□ 0.27
NPLOC4-220ENST00000576940 CDC42BPBQ9Y5S2 1711 aa16.71■□□□□ 0.27
NPLOC4-220ENST00000576940 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
NPLOC4-220ENST00000576940 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
NPLOC4-220ENST00000576940 REREQ9P2R6 1566 aa16.69■□□□□ 0.26
NPLOC4-220ENST00000576940 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
NPLOC4-220ENST00000576940 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
NPLOC4-220ENST00000576940 AGLP35573 1532 aa16.67■□□□□ 0.26
NPLOC4-220ENST00000576940 NCKAP5LQ9HCH0 1330 aa16.67■□□□□ 0.26
NPLOC4-220ENST00000576940 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
NPLOC4-220ENST00000576940 ABCC1P33527 1531 aa16.65■□□□□ 0.26
NPLOC4-220ENST00000576940 ZMYM3Q14202 1370 aa16.64■□□□□ 0.26
NPLOC4-220ENST00000576940 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.25
NPLOC4-220ENST00000576940 KIDINS220Q9ULH0 1771 aa16.64■□□□□ 0.25
NPLOC4-220ENST00000576940 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
NPLOC4-220ENST00000576940 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
NPLOC4-220ENST00000576940 CNTLNQ9NXG0 1405 aa16.62■□□□□ 0.25
NPLOC4-220ENST00000576940 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
NPLOC4-220ENST00000576940 SPATA31D1Q6ZQQ2 1576 aa16.61■□□□□ 0.25
NPLOC4-220ENST00000576940 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
NPLOC4-220ENST00000576940 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
NPLOC4-220ENST00000576940 CASKIN1Q8WXD9 1431 aa16.61■□□□□ 0.25
NPLOC4-220ENST00000576940 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
NPLOC4-220ENST00000576940 UBAP1LF5GYI3 381 aa16.59■□□□□ 0.25
NPLOC4-220ENST00000576940 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
NPLOC4-220ENST00000576940 GGT6Q6P531 493 aa16.58■□□□□ 0.24
NPLOC4-220ENST00000576940 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.24
NPLOC4-220ENST00000576940 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
NPLOC4-220ENST00000576940 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
NPLOC4-220ENST00000576940 NPATQ14207 1427 aa16.57■□□□□ 0.24
NPLOC4-220ENST00000576940 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
NPLOC4-220ENST00000576940 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
NPLOC4-220ENST00000576940 PKD2Q13563 968 aa16.54■□□□□ 0.24
NPLOC4-220ENST00000576940 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-220ENST00000576940 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
NPLOC4-220ENST00000576940 MROH2AA6NES4 1674 aa16.52■□□□□ 0.23
NPLOC4-220ENST00000576940 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
NPLOC4-220ENST00000576940 PTPRKQ15262 1439 aa16.52■□□□□ 0.23
NPLOC4-220ENST00000576940 A2MP01023 1474 aa16.5■□□□□ 0.23
NPLOC4-220ENST00000576940 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
NPLOC4-220ENST00000576940 ZNF644Q9H582 1327 aaPredicted RBP16.49■□□□□ 0.23
NPLOC4-220ENST00000576940 ATP7AQ04656 1500 aa16.49■□□□□ 0.23
NPLOC4-220ENST00000576940 KIAA1107Q9UPP5 1409 aa16.48■□□□□ 0.23
NPLOC4-220ENST00000576940 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
NPLOC4-220ENST00000576940 PLA2R1Q13018 1463 aa16.47■□□□□ 0.23
NPLOC4-220ENST00000576940 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-220ENST00000576940 FYCO1Q9BQS8 1478 aa16.47■□□□□ 0.23
NPLOC4-220ENST00000576940 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.23
NPLOC4-220ENST00000576940 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
NPLOC4-220ENST00000576940 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.23
NPLOC4-220ENST00000576940 CEP170BQ9Y4F5 1589 aaPredicted RBP16.46■□□□□ 0.23
NPLOC4-220ENST00000576940 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
NPLOC4-220ENST00000576940 HSPA1LP34931 641 aa16.45■□□□□ 0.22
NPLOC4-220ENST00000576940 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
NPLOC4-220ENST00000576940 INO80Q9ULG1 1556 aaPredicted RBP16.43■□□□□ 0.22
NPLOC4-220ENST00000576940 PLEKHH2Q8IVE3 1493 aa16.43■□□□□ 0.22
NPLOC4-220ENST00000576940 ZNF142P52746 1687 aaPredicted RBP16.43■□□□□ 0.22
NPLOC4-220ENST00000576940 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
NPLOC4-220ENST00000576940 KIF3BO15066 747 aa16.4■□□□□ 0.22
NPLOC4-220ENST00000576940 TOM1O60784 492 aa16.4■□□□□ 0.22
NPLOC4-220ENST00000576940 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
NPLOC4-220ENST00000576940 A2ML1A8K2U0 1454 aa16.4■□□□□ 0.22
NPLOC4-220ENST00000576940 DHX29Q7Z478 1369 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-220ENST00000576940 MBD5Q9P267 1494 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 317 ms