RNA–Protein interactions for RNA: ENST00000575212.1

NPTX1-204, Transcript of neuronal pentraxin 1, humanhuman

TSL 4

Gene NPTX1, Length 472 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-204ENST00000575212 HECW1Q76N89 1606 aa37.42■■■■□ 3.58
NPTX1-204ENST00000575212 NUP153P49790 1475 aaKnown RBP37.41■■■■□ 3.58
NPTX1-204ENST00000575212 ARHGEF12Q9NZN5 1544 aa37.39■■■■□ 3.58
NPTX1-204ENST00000575212 SAMD9Q5K651 1589 aa37.38■■■■□ 3.58
NPTX1-204ENST00000575212 PLEKHD1A6NEE1 506 aa37.38■■■■□ 3.57
NPTX1-204ENST00000575212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.36■■■■□ 3.57
NPTX1-204ENST00000575212 UHRF1BP1Q6BDS2 1440 aa37.34■■■■□ 3.57
NPTX1-204ENST00000575212 SETD1BQ9UPS6 1966 aaKnown RBP37.29■■■■□ 3.56
NPTX1-204ENST00000575212 ATP10AO60312 1499 aa37.26■■■■□ 3.56
NPTX1-204ENST00000575212 PTPRTO14522 1441 aa37.26■■■■□ 3.55
NPTX1-204ENST00000575212 C9orf84Q5VXU9 1444 aa37.25■■■■□ 3.55
NPTX1-204ENST00000575212 SCAPERQ9BY12 1400 aa37.25■■■■□ 3.55
NPTX1-204ENST00000575212 LTBP4Q8N2S1 1624 aa37.23■■■■□ 3.55
NPTX1-204ENST00000575212 RANGAP1P46060 587 aaPredicted RBP37.21■■■■□ 3.55
NPTX1-204ENST00000575212 IQSEC2Q5JU85 1478 aa37.16■■■■□ 3.54
NPTX1-204ENST00000575212 C3P01024 1663 aa37.06■■■■□ 3.52
NPTX1-204ENST00000575212 PLCH2O75038 1416 aa37.06■■■■□ 3.52
NPTX1-204ENST00000575212 UBAP1LF5GYI3 381 aa37.02■■■■□ 3.52
NPTX1-204ENST00000575212 MYT1LQ9UL68 1186 aa37.01■■■■□ 3.52
NPTX1-204ENST00000575212 NCOA1Q15788 1441 aa36.98■■■■□ 3.51
NPTX1-204ENST00000575212 CDK13Q14004 1512 aaKnown RBP36.97■■■■□ 3.51
NPTX1-204ENST00000575212 EFCAB2Q5VUJ9 269 aa36.97■■■■□ 3.51
NPTX1-204ENST00000575212 ESF1Q9H501 851 aaKnown RBP36.96■■■■□ 3.51
NPTX1-204ENST00000575212 MYO5CQ9NQX4 1742 aa36.96■■■■□ 3.51
NPTX1-204ENST00000575212 ZNF518AQ6AHZ1 1483 aa36.93■■■■□ 3.5
NPTX1-204ENST00000575212 TRAPPC8Q9Y2L5 1435 aa36.93■■■■□ 3.5
NPTX1-204ENST00000575212 AFAP1Q8N556 730 aa36.9■■■■□ 3.5
NPTX1-204ENST00000575212 DIP2CQ9Y2E4 1556 aa36.89■■■■□ 3.5
NPTX1-204ENST00000575212 ZNF335Q9H4Z2 1342 aaPredicted RBP36.87■■■■□ 3.49
NPTX1-204ENST00000575212 CAMSAP1Q5T5Y3 1602 aa36.86■■■■□ 3.49
NPTX1-204ENST00000575212 CSRNP3Q8WYN3 585 aa36.86■■■■□ 3.49
NPTX1-204ENST00000575212 KDM5CP41229 1560 aa36.85■■■■□ 3.49
NPTX1-204ENST00000575212 REREQ9P2R6 1566 aa36.82■■■■□ 3.48
NPTX1-204ENST00000575212 ABCA6Q8N139 1617 aa36.81■■■■□ 3.48
NPTX1-204ENST00000575212 NCKAP5LQ9HCH0 1330 aa36.8■■■■□ 3.48
NPTX1-204ENST00000575212 MED1Q15648 1581 aaPredicted RBP36.79■■■■□ 3.48
NPTX1-204ENST00000575212 ARHGAP5Q13017 1502 aa36.78■■■■□ 3.48
NPTX1-204ENST00000575212 ATP1B4Q9UN42 357 aaPredicted RBP36.75■■■■□ 3.47
NPTX1-204ENST00000575212 SCAF1Q9H7N4 1312 aaKnown RBP36.74■■■■□ 3.47
NPTX1-204ENST00000575212 KIF14Q15058 1648 aa36.74■■■■□ 3.47
NPTX1-204ENST00000575212 AGLP35573 1532 aa36.72■■■■□ 3.47
NPTX1-204ENST00000575212 HSPA1LP34931 641 aa36.7■■■■□ 3.47
NPTX1-204ENST00000575212 CNTLNQ9NXG0 1405 aa36.69■■■■□ 3.46
NPTX1-204ENST00000575212 MLH3Q9UHC1 1453 aa36.67■■■■□ 3.46
NPTX1-204ENST00000575212 PIP4K2BP78356 416 aa36.64■■■■□ 3.46
NPTX1-204ENST00000575212 SUPT6HQ7KZ85 1726 aaKnown RBP36.63■■■■□ 3.45
NPTX1-204ENST00000575212 NPATQ14207 1427 aa36.63■■■■□ 3.45
NPTX1-204ENST00000575212 CDK11AQ9UQ88 783 aaPredicted RBP36.62■■■■□ 3.45
NPTX1-204ENST00000575212 PHF23Q9BUL5 403 aaPredicted RBP36.6■■■■□ 3.45
NPTX1-204ENST00000575212 PKD2Q13563 968 aa36.59■■■■□ 3.45
NPTX1-204ENST00000575212 MROH2AA6NES4 1674 aa36.58■■■■□ 3.45
NPTX1-204ENST00000575212 CDC42BPBQ9Y5S2 1711 aa36.56■■■■□ 3.44
NPTX1-204ENST00000575212 ZMYM3Q14202 1370 aa36.54■■■■□ 3.44
NPTX1-204ENST00000575212 PLA2R1Q13018 1463 aa36.53■■■■□ 3.44
NPTX1-204ENST00000575212 KIDINS220Q9ULH0 1771 aa36.53■■■■□ 3.44
NPTX1-204ENST00000575212 MYO3AQ8NEV4 1616 aa36.52■■■■□ 3.44
NPTX1-204ENST00000575212 PPP6R1Q9UPN7 881 aa36.52■■■■□ 3.44
NPTX1-204ENST00000575212 ZNF142P52746 1687 aaPredicted RBP36.51■■■■□ 3.44
NPTX1-204ENST00000575212 TROQ12816 1431 aaPredicted RBP36.51■■■■□ 3.44
NPTX1-204ENST00000575212 ITSN2Q9NZM3 1697 aa36.5■■■■□ 3.43
NPTX1-204ENST00000575212 CLIP1P30622 1438 aa36.5■■■■□ 3.43
NPTX1-204ENST00000575212 TCOF1Q13428 1488 aaKnown RBP36.49■■■■□ 3.43
NPTX1-204ENST00000575212 ABCC1P33527 1531 aa36.49■■■■□ 3.43
NPTX1-204ENST00000575212 TOM1O60784 492 aa36.48■■■■□ 3.43
NPTX1-204ENST00000575212 CEP170BQ9Y4F5 1589 aaPredicted RBP36.47■■■■□ 3.43
NPTX1-204ENST00000575212 CLTCQ00610 1675 aaKnown RBP36.44■■■■□ 3.42
NPTX1-204ENST00000575212 FMN1Q68DA7 1419 aa36.42■■■■□ 3.42
NPTX1-204ENST00000575212 PREX2Q70Z35 1606 aa36.41■■■■□ 3.42
NPTX1-204ENST00000575212 EEA1Q15075 1411 aa36.36■■■■□ 3.41
NPTX1-204ENST00000575212 PTPRKQ15262 1439 aa36.34■■■■□ 3.41
NPTX1-204ENST00000575212 LRRIQ1Q96JM4 1722 aa36.33■■■■□ 3.41
NPTX1-204ENST00000575212 CPS1P31327 1500 aa36.32■■■■□ 3.4
NPTX1-204ENST00000575212 SENP3Q9H4L4 574 aaPredicted RBP36.3■■■■□ 3.4
NPTX1-204ENST00000575212 SAMD9LQ8IVG5 1584 aa36.29■■■■□ 3.4
NPTX1-204ENST00000575212 SHANK2Q9UPX8 1470 aa36.26■■■■□ 3.4
NPTX1-204ENST00000575212 POLR1AO95602 1720 aaPredicted RBP36.25■■■■□ 3.39
NPTX1-204ENST00000575212 EHMT2Q96KQ7 1210 aa36.24■■■■□ 3.39
NPTX1-204ENST00000575212 GGT6Q6P531 493 aa36.23■■■■□ 3.39
NPTX1-204ENST00000575212 ZNF777Q9ULD5 760 aaPredicted RBP36.23■■■■□ 3.39
NPTX1-204ENST00000575212 SPAG9O60271 1321 aaKnown RBP36.23■■■■□ 3.39
NPTX1-204ENST00000575212 DNMT1P26358 1616 aaKnown RBP36.23■■■■□ 3.39
NPTX1-204ENST00000575212 CDC42BPAQ5VT25 1732 aa36.22■■■■□ 3.39
NPTX1-204ENST00000575212 A2ML1A8K2U0 1454 aa36.21■■■■□ 3.39
NPTX1-204ENST00000575212 ARHGAP35Q9NRY4 1499 aa36.21■■■■□ 3.39
NPTX1-204ENST00000575212 NEURL4Q96JN8 1562 aa36.17■■■■□ 3.38
NPTX1-204ENST00000575212 SYCP2Q9BX26 1530 aa36.16■■■■□ 3.38
NPTX1-204ENST00000575212 ALKQ9UM73 1620 aa36.16■■■■□ 3.38
NPTX1-204ENST00000575212 UBTFP17480 764 aaKnown RBP36.15■■■■□ 3.38
NPTX1-204ENST00000575212 PLXNC1O60486 1568 aa36.14■■■■□ 3.38
NPTX1-204ENST00000575212 ATP7AQ04656 1500 aa36.13■■■■□ 3.38
NPTX1-204ENST00000575212 A2MP01023 1474 aa36.13■■■■□ 3.37
NPTX1-204ENST00000575212 HNRNPMP52272 730 aaKnown RBP eCLIP36.12■■■■□ 3.37
NPTX1-204ENST00000575212 VWDEQ8N2E2 1590 aa36.08■■■■□ 3.37
NPTX1-204ENST00000575212 RGS17Q9UGC6 210 aaPredicted RBP36.05■■■■□ 3.36
NPTX1-204ENST00000575212 INO80Q9ULG1 1556 aaPredicted RBP36.04■■■■□ 3.36
NPTX1-204ENST00000575212 ANKLE2Q86XL3 938 aa36.01■■■■□ 3.36
NPTX1-204ENST00000575212 CCDC18Q5T9S5 1454 aa35.99■■■■□ 3.35
NPTX1-204ENST00000575212 TNRQ92752 1358 aa35.99■■■■□ 3.35
NPTX1-204ENST00000575212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.97■■■■□ 3.35
NPTX1-204ENST00000575212 ADGBQ8N7X0 1667 aa35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms