RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 SKAP1Q86WV1 359 aa11.53□□□□□ -0.56
RPAIN-215ENST00000575112 KDM6BO15054 1643 aa11.53□□□□□ -0.56
RPAIN-215ENST00000575112 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
RPAIN-215ENST00000575112 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
RPAIN-215ENST00000575112 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
RPAIN-215ENST00000575112 PRKCSHP14314 528 aaPredicted RBP11.52□□□□□ -0.56
RPAIN-215ENST00000575112 MAP3K1Q13233 1512 aa11.52□□□□□ -0.57
RPAIN-215ENST00000575112 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
RPAIN-215ENST00000575112 PTPN23Q9H3S7 1636 aa11.52□□□□□ -0.57
RPAIN-215ENST00000575112 CCDC136Q96JN2 1154 aa11.52□□□□□ -0.57
RPAIN-215ENST00000575112 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
RPAIN-215ENST00000575112 HFM1A2PYH4 1435 aa11.5□□□□□ -0.57
RPAIN-215ENST00000575112 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
RPAIN-215ENST00000575112 CNTLNQ9NXG0 1405 aa11.48□□□□□ -0.57
RPAIN-215ENST00000575112 NCOA2Q15596 1464 aa11.48□□□□□ -0.57
RPAIN-215ENST00000575112 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-215ENST00000575112 NUP155O75694 1391 aa11.48□□□□□ -0.57
RPAIN-215ENST00000575112 CCDC7Q96M83 1385 aa11.47□□□□□ -0.57
RPAIN-215ENST00000575112 KIF7Q2M1P5 1343 aa11.47□□□□□ -0.57
RPAIN-215ENST00000575112 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
RPAIN-215ENST00000575112 ZBED9Q6R2W3 1325 aa11.47□□□□□ -0.57
RPAIN-215ENST00000575112 LAS1LQ9Y4W2 734 aaKnown RBP11.47□□□□□ -0.57
RPAIN-215ENST00000575112 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
RPAIN-215ENST00000575112 CASKIN1Q8WXD9 1431 aa11.46□□□□□ -0.58
RPAIN-215ENST00000575112 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
RPAIN-215ENST00000575112 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
RPAIN-215ENST00000575112 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-215ENST00000575112 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-215ENST00000575112 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
RPAIN-215ENST00000575112 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
RPAIN-215ENST00000575112 MAGI3Q5TCQ9 1506 aa11.43□□□□□ -0.58
RPAIN-215ENST00000575112 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
RPAIN-215ENST00000575112 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
RPAIN-215ENST00000575112 PRG4Q92954 1404 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-215ENST00000575112 NCOA1Q15788 1441 aa11.42□□□□□ -0.58
RPAIN-215ENST00000575112 IPO9Q96P70 1041 aaKnown RBP11.41□□□□□ -0.58
RPAIN-215ENST00000575112 SAFB2Q14151 953 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPAIN-215ENST00000575112 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.59
RPAIN-215ENST00000575112 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
RPAIN-215ENST00000575112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.39□□□□□ -0.59
RPAIN-215ENST00000575112 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-215ENST00000575112 PLIN1O60240 522 aa11.38□□□□□ -0.59
RPAIN-215ENST00000575112 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
RPAIN-215ENST00000575112 ANP32AP39687 249 aaKnown RBP11.38□□□□□ -0.59
RPAIN-215ENST00000575112 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
RPAIN-215ENST00000575112 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
RPAIN-215ENST00000575112 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
RPAIN-215ENST00000575112 DHX29Q7Z478 1369 aaKnown RBP11.35□□□□□ -0.59
RPAIN-215ENST00000575112 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
RPAIN-215ENST00000575112 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
RPAIN-215ENST00000575112 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-215ENST00000575112 SPATA31E1Q6ZUB1 1445 aa11.34□□□□□ -0.59
RPAIN-215ENST00000575112 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
RPAIN-215ENST00000575112 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
RPAIN-215ENST00000575112 BCORL1Q5H9F3 1711 aa11.33□□□□□ -0.6
RPAIN-215ENST00000575112 SMG6Q86US8 1419 aaKnown RBP11.33□□□□□ -0.6
RPAIN-215ENST00000575112 NEFMP07197 916 aa11.33□□□□□ -0.6
RPAIN-215ENST00000575112 GGT6Q6P531 493 aa11.33□□□□□ -0.6
RPAIN-215ENST00000575112 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
RPAIN-215ENST00000575112 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
RPAIN-215ENST00000575112 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
RPAIN-215ENST00000575112 ANKRD30BQ9BXX2 1392 aa11.32□□□□□ -0.6
RPAIN-215ENST00000575112 CCDC146Q8IYE0 955 aa11.32□□□□□ -0.6
RPAIN-215ENST00000575112 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
RPAIN-215ENST00000575112 USP47Q96K76 1375 aa11.32□□□□□ -0.6
RPAIN-215ENST00000575112 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
RPAIN-215ENST00000575112 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
RPAIN-215ENST00000575112 PLB1Q6P1J6 1458 aa11.31□□□□□ -0.6
RPAIN-215ENST00000575112 CTTNBP2Q8WZ74 1663 aa11.31□□□□□ -0.6
RPAIN-215ENST00000575112 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
RPAIN-215ENST00000575112 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
RPAIN-215ENST00000575112 RNF123Q5XPI4 1314 aa11.31□□□□□ -0.6
RPAIN-215ENST00000575112 TEX14Q8IWB6 1497 aa11.3□□□□□ -0.6
RPAIN-215ENST00000575112 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
RPAIN-215ENST00000575112 ANKRD30AQ9BXX3 1397 aa11.3□□□□□ -0.6
RPAIN-215ENST00000575112 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
RPAIN-215ENST00000575112 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
RPAIN-215ENST00000575112 UGGT2Q9NYU1 1516 aa11.3□□□□□ -0.6
RPAIN-215ENST00000575112 PDE4AP27815 886 aa11.29□□□□□ -0.6
RPAIN-215ENST00000575112 PANK3Q9H999 370 aa11.29□□□□□ -0.6
RPAIN-215ENST00000575112 KIF3BO15066 747 aa11.29□□□□□ -0.6
RPAIN-215ENST00000575112 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
RPAIN-215ENST00000575112 HECW1Q76N89 1606 aa11.28□□□□□ -0.6
RPAIN-215ENST00000575112 EPRSP07814 1512 aaKnown RBP11.28□□□□□ -0.6
RPAIN-215ENST00000575112 RGS3P49796 1198 aa11.27□□□□□ -0.6
RPAIN-215ENST00000575112 RPRD2Q5VT52 1461 aaKnown RBP11.27□□□□□ -0.6
RPAIN-215ENST00000575112 STK26Q9P289 416 aa11.27□□□□□ -0.61
RPAIN-215ENST00000575112 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
RPAIN-215ENST00000575112 RRP1P56182 461 aaKnown RBP11.26□□□□□ -0.61
RPAIN-215ENST00000575112 PTPRGP23470 1445 aa11.26□□□□□ -0.61
RPAIN-215ENST00000575112 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-215ENST00000575112 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
RPAIN-215ENST00000575112 C20orf194Q5TEA3 1177 aa11.26□□□□□ -0.61
RPAIN-215ENST00000575112 MLECQ14165 292 aa11.25□□□□□ -0.61
RPAIN-215ENST00000575112 GCC2Q8IWJ2 1684 aa11.25□□□□□ -0.61
RPAIN-215ENST00000575112 ARXQ96QS3 562 aa11.25□□□□□ -0.61
RPAIN-215ENST00000575112 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
RPAIN-215ENST00000575112 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
RPAIN-215ENST00000575112 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-215ENST00000575112 BACH2Q9BYV9 841 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms