RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
RAB40B-206ENST00000571995 NPM1P06748 294 aaKnown RBP eCLIP21.98■■□□□ 1.11
RAB40B-206ENST00000571995 ST20-MTHFSA0A0A6YYL1 179 aa21.97■■□□□ 1.11
RAB40B-206ENST00000571995 HFM1A2PYH4 1435 aa21.96■■□□□ 1.11
RAB40B-206ENST00000571995 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
RAB40B-206ENST00000571995 NPM2Q86SE8 214 aaKnown RBP21.95■■□□□ 1.1
RAB40B-206ENST00000571995 TNNT2P45379 298 aaPredicted RBP21.94■■□□□ 1.1
RAB40B-206ENST00000571995 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
RAB40B-206ENST00000571995 EFCAB5A4FU69 1503 aa21.94■■□□□ 1.1
RAB40B-206ENST00000571995 EPRSP07814 1512 aaKnown RBP21.93■■□□□ 1.1
RAB40B-206ENST00000571995 NUTM2DQ5VT03 806 aaPredicted RBP21.93■■□□□ 1.1
RAB40B-206ENST00000571995 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
RAB40B-206ENST00000571995 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
RAB40B-206ENST00000571995 KIF7Q2M1P5 1343 aa21.9■■□□□ 1.1
RAB40B-206ENST00000571995 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.1
RAB40B-206ENST00000571995 ANKRD30AQ9BXX3 1397 aa21.89■■□□□ 1.1
RAB40B-206ENST00000571995 PTPRGP23470 1445 aa21.88■■□□□ 1.09
RAB40B-206ENST00000571995 CCDC136Q96JN2 1154 aa21.88■■□□□ 1.09
RAB40B-206ENST00000571995 SAFB2Q14151 953 aaKnown RBP eCLIP21.88■■□□□ 1.09
RAB40B-206ENST00000571995 GGT6Q6P531 493 aa21.88■■□□□ 1.09
RAB40B-206ENST00000571995 THOC2Q8NI27 1593 aaKnown RBP21.83■■□□□ 1.08
RAB40B-206ENST00000571995 NEUROD2Q15784 382 aa21.82■■□□□ 1.08
RAB40B-206ENST00000571995 RBM19Q9Y4C8 960 aaKnown RBP21.82■■□□□ 1.08
RAB40B-206ENST00000571995 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
RAB40B-206ENST00000571995 KIF3BO15066 747 aa21.8■■□□□ 1.08
RAB40B-206ENST00000571995 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
RAB40B-206ENST00000571995 IQGAP2Q13576 1575 aa21.8■■□□□ 1.08
RAB40B-206ENST00000571995 USP47Q96K76 1375 aa21.79■■□□□ 1.08
RAB40B-206ENST00000571995 ROCK2O75116 1388 aaKnown RBP21.79■■□□□ 1.08
RAB40B-206ENST00000571995 MAP3K1Q13233 1512 aa21.79■■□□□ 1.08
RAB40B-206ENST00000571995 CCDC7Q96M83 1385 aa21.78■■□□□ 1.08
RAB40B-206ENST00000571995 CUL7Q14999 1698 aa21.78■■□□□ 1.08
RAB40B-206ENST00000571995 EHBP1L1Q8N3D4 1523 aa21.78■■□□□ 1.08
RAB40B-206ENST00000571995 STAG3Q9UJ98 1225 aa21.77■■□□□ 1.08
RAB40B-206ENST00000571995 DAPK1P53355 1430 aa21.76■■□□□ 1.07
RAB40B-206ENST00000571995 PTPN23Q9H3S7 1636 aa21.76■■□□□ 1.07
RAB40B-206ENST00000571995 KIF21AQ7Z4S6 1674 aa21.76■■□□□ 1.07
RAB40B-206ENST00000571995 ABCC5O15440 1437 aa21.76■■□□□ 1.07
RAB40B-206ENST00000571995 MLECQ14165 292 aa21.75■■□□□ 1.07
RAB40B-206ENST00000571995 ANKRD50Q9ULJ7 1429 aa21.75■■□□□ 1.07
RAB40B-206ENST00000571995 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
RAB40B-206ENST00000571995 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
RAB40B-206ENST00000571995 MAGI3Q5TCQ9 1506 aa21.73■■□□□ 1.07
RAB40B-206ENST00000571995 SUPT6HQ7KZ85 1726 aaKnown RBP21.73■■□□□ 1.07
RAB40B-206ENST00000571995 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
RAB40B-206ENST00000571995 EFCAB2Q5VUJ9 269 aa21.72■■□□□ 1.07
RAB40B-206ENST00000571995 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
RAB40B-206ENST00000571995 NBR1Q14596 966 aa21.71■■□□□ 1.07
RAB40B-206ENST00000571995 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
RAB40B-206ENST00000571995 WDR43Q15061 677 aaKnown RBP eCLIP21.7■■□□□ 1.06
RAB40B-206ENST00000571995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.69■■□□□ 1.06
RAB40B-206ENST00000571995 GRIN2AQ12879 1464 aa21.68■■□□□ 1.06
RAB40B-206ENST00000571995 CANXP27824 592 aaKnown RBP21.68■■□□□ 1.06
RAB40B-206ENST00000571995 KNSTRNQ9Y448 316 aa21.68■■□□□ 1.06
RAB40B-206ENST00000571995 TROQ12816 1431 aaPredicted RBP21.68■■□□□ 1.06
RAB40B-206ENST00000571995 ANKRD30BQ9BXX2 1392 aa21.67■■□□□ 1.06
RAB40B-206ENST00000571995 STK26Q9P289 416 aa21.66■■□□□ 1.06
RAB40B-206ENST00000571995 PPP4R2Q9NY27 417 aa21.66■■□□□ 1.06
RAB40B-206ENST00000571995 HECW1Q76N89 1606 aa21.65■■□□□ 1.06
RAB40B-206ENST00000571995 SPAG9O60271 1321 aaKnown RBP21.65■■□□□ 1.06
RAB40B-206ENST00000571995 PANK3Q9H999 370 aa21.63■■□□□ 1.05
RAB40B-206ENST00000571995 NUP153P49790 1475 aaKnown RBP21.63■■□□□ 1.05
RAB40B-206ENST00000571995 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
RAB40B-206ENST00000571995 PLIN1O60240 522 aa21.63■■□□□ 1.05
RAB40B-206ENST00000571995 PPM1GO15355 546 aaPredicted RBP21.61■■□□□ 1.05
RAB40B-206ENST00000571995 CNTLNQ9NXG0 1405 aa21.61■■□□□ 1.05
RAB40B-206ENST00000571995 CTTNBP2Q8WZ74 1663 aa21.6■■□□□ 1.05
RAB40B-206ENST00000571995 UGGT2Q9NYU1 1516 aa21.6■■□□□ 1.05
RAB40B-206ENST00000571995 CCDC146Q8IYE0 955 aa21.59■■□□□ 1.05
RAB40B-206ENST00000571995 CFAP43Q8NDM7 1665 aa21.59■■□□□ 1.05
RAB40B-206ENST00000571995 C9orf84Q5VXU9 1444 aa21.59■■□□□ 1.05
RAB40B-206ENST00000571995 CCDC144AA2RUR9 1427 aa21.58■■□□□ 1.05
RAB40B-206ENST00000571995 TMF1P82094 1093 aa21.58■■□□□ 1.04
RAB40B-206ENST00000571995 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
RAB40B-206ENST00000571995 DAXXQ9UER7 740 aaPredicted RBP21.57■■□□□ 1.04
RAB40B-206ENST00000571995 NCOA1Q15788 1441 aa21.57■■□□□ 1.04
RAB40B-206ENST00000571995 CAMSAP2Q08AD1 1489 aa21.56■■□□□ 1.04
RAB40B-206ENST00000571995 TRAK1Q9UPV9 953 aa21.56■■□□□ 1.04
RAB40B-206ENST00000571995 KDM6BO15054 1643 aa21.55■■□□□ 1.04
RAB40B-206ENST00000571995 SLC24A1O60721 1099 aa21.55■■□□□ 1.04
RAB40B-206ENST00000571995 ABCA5Q8WWZ7 1642 aa21.54■■□□□ 1.04
RAB40B-206ENST00000571995 CDCA7LQ96GN5 454 aa21.53■■□□□ 1.04
RAB40B-206ENST00000571995 ANP32EQ9BTT0 268 aa21.52■■□□□ 1.04
RAB40B-206ENST00000571995 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
RAB40B-206ENST00000571995 GPATCH8Q9UKJ3 1502 aaKnown RBP21.51■■□□□ 1.03
RAB40B-206ENST00000571995 ESF1Q9H501 851 aaKnown RBP21.51■■□□□ 1.03
RAB40B-206ENST00000571995 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
RAB40B-206ENST00000571995 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
RAB40B-206ENST00000571995 AKNAQ7Z591 1439 aa21.5■■□□□ 1.03
RAB40B-206ENST00000571995 NUDCQ9Y266 331 aa21.49■■□□□ 1.03
RAB40B-206ENST00000571995 MYT1Q01538 1121 aa21.49■■□□□ 1.03
RAB40B-206ENST00000571995 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
RAB40B-206ENST00000571995 ANP32AP39687 249 aaKnown RBP21.48■■□□□ 1.03
RAB40B-206ENST00000571995 ZBED9Q6R2W3 1325 aa21.47■■□□□ 1.03
RAB40B-206ENST00000571995 TMEM132EQ6IEE7 984 aa21.47■■□□□ 1.03
RAB40B-206ENST00000571995 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
RAB40B-206ENST00000571995 TARBP1Q13395 1621 aaKnown RBP21.45■■□□□ 1.02
RAB40B-206ENST00000571995 EXOC6Q8TAG9 804 aa21.45■■□□□ 1.02
RAB40B-206ENST00000571995 ARHGAP5Q13017 1502 aa21.45■■□□□ 1.02
RAB40B-206ENST00000571995 SOX12O15370 315 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms