RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 BRPF3Q9ULD4 1205 aa26.52■■□□□ 1.84
AC009041.2-204ENST00000568394 TMC1Q8TDI8 760 aa26.52■■□□□ 1.84
AC009041.2-204ENST00000568394 CFDP1Q9UEE9 299 aaPredicted RBP26.52■■□□□ 1.84
AC009041.2-204ENST00000568394 CDK13Q14004 1512 aaKnown RBP26.52■■□□□ 1.84
AC009041.2-204ENST00000568394 FMN1Q68DA7 1419 aa26.52■■□□□ 1.84
AC009041.2-204ENST00000568394 SLC4A3P48751 1232 aa26.51■■□□□ 1.83
AC009041.2-204ENST00000568394 CCDC18Q5T9S5 1454 aa26.5■■□□□ 1.83
AC009041.2-204ENST00000568394 NUDCQ9Y266 331 aa26.5■■□□□ 1.83
AC009041.2-204ENST00000568394 MPHOSPH9Q99550 1183 aa26.48■■□□□ 1.83
AC009041.2-204ENST00000568394 SKAP1Q86WV1 359 aa26.48■■□□□ 1.83
AC009041.2-204ENST00000568394 NCOA2Q15596 1464 aa26.47■■□□□ 1.83
AC009041.2-204ENST00000568394 RGL3Q3MIN7 710 aa26.47■■□□□ 1.83
AC009041.2-204ENST00000568394 CASKIN1Q8WXD9 1431 aa26.46■■□□□ 1.83
AC009041.2-204ENST00000568394 EXOC6Q8TAG9 804 aa26.45■■□□□ 1.82
AC009041.2-204ENST00000568394 CNTLNQ9NXG0 1405 aa26.42■■□□□ 1.82
AC009041.2-204ENST00000568394 PDE4AP27815 886 aa26.41■■□□□ 1.82
AC009041.2-204ENST00000568394 HNRNPMP52272 730 aaKnown RBP eCLIP26.38■■□□□ 1.81
AC009041.2-204ENST00000568394 CCDC7Q96M83 1385 aa26.38■■□□□ 1.81
AC009041.2-204ENST00000568394 ARXQ96QS3 562 aa26.37■■□□□ 1.81
AC009041.2-204ENST00000568394 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
AC009041.2-204ENST00000568394 KIF7Q2M1P5 1343 aa26.35■■□□□ 1.81
AC009041.2-204ENST00000568394 UACAQ9BZF9 1416 aa26.34■■□□□ 1.81
AC009041.2-204ENST00000568394 PPM1GO15355 546 aaPredicted RBP26.32■■□□□ 1.8
AC009041.2-204ENST00000568394 NBPF8Q3BBV2 869 aa26.32■■□□□ 1.8
AC009041.2-204ENST00000568394 PLIN1O60240 522 aa26.32■■□□□ 1.8
AC009041.2-204ENST00000568394 MYOM3Q5VTT5 1437 aa26.31■■□□□ 1.8
AC009041.2-204ENST00000568394 FYCO1Q9BQS8 1478 aa26.31■■□□□ 1.8
AC009041.2-204ENST00000568394 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
AC009041.2-204ENST00000568394 PRG4Q92954 1404 aaPredicted RBP26.3■■□□□ 1.8
AC009041.2-204ENST00000568394 PKD2Q13563 968 aa26.29■■□□□ 1.8
AC009041.2-204ENST00000568394 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
AC009041.2-204ENST00000568394 NAIPQ13075 1403 aa26.26■■□□□ 1.79
AC009041.2-204ENST00000568394 PLEKHD1A6NEE1 506 aa26.26■■□□□ 1.79
AC009041.2-204ENST00000568394 TCERG1O14776 1098 aaKnown RBP26.24■■□□□ 1.79
AC009041.2-204ENST00000568394 GSE1Q14687 1217 aa26.23■■□□□ 1.79
AC009041.2-204ENST00000568394 RCAN3Q9UKA8 241 aa26.22■■□□□ 1.79
AC009041.2-204ENST00000568394 MAGI3Q5TCQ9 1506 aa26.22■■□□□ 1.79
AC009041.2-204ENST00000568394 SNAPC4Q5SXM2 1469 aa26.21■■□□□ 1.79
AC009041.2-204ENST00000568394 RRP1P56182 461 aaKnown RBP26.2■■□□□ 1.78
AC009041.2-204ENST00000568394 FRAT1Q92837 279 aaPredicted RBP26.2■■□□□ 1.78
AC009041.2-204ENST00000568394 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
AC009041.2-204ENST00000568394 SMG6Q86US8 1419 aaKnown RBP26.19■■□□□ 1.78
AC009041.2-204ENST00000568394 NFKBIBQ15653 356 aa26.17■■□□□ 1.78
AC009041.2-204ENST00000568394 USP35Q9P2H5 1018 aa26.16■■□□□ 1.78
AC009041.2-204ENST00000568394 BACH2Q9BYV9 841 aa26.16■■□□□ 1.78
AC009041.2-204ENST00000568394 TSPY4P0CV99 314 aa26.15■■□□□ 1.78
AC009041.2-204ENST00000568394 TSPY10P0CW01 314 aa26.15■■□□□ 1.78
AC009041.2-204ENST00000568394 DCAF11Q8TEB1 546 aa26.15■■□□□ 1.78
AC009041.2-204ENST00000568394 HFM1A2PYH4 1435 aa26.15■■□□□ 1.78
AC009041.2-204ENST00000568394 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
AC009041.2-204ENST00000568394 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
AC009041.2-204ENST00000568394 RGS3P49796 1198 aa26.13■■□□□ 1.77
AC009041.2-204ENST00000568394 EPRSP07814 1512 aaKnown RBP26.13■■□□□ 1.77
AC009041.2-204ENST00000568394 DDRGK1Q96HY6 314 aa26.11■■□□□ 1.77
AC009041.2-204ENST00000568394 CDCA7LQ96GN5 454 aa26.11■■□□□ 1.77
AC009041.2-204ENST00000568394 GRIN2BQ13224 1484 aa26.09■■□□□ 1.77
AC009041.2-204ENST00000568394 PNISRQ8TF01 805 aaKnown RBP26.08■■□□□ 1.77
AC009041.2-204ENST00000568394 MRC2Q9UBG0 1479 aa26.07■■□□□ 1.76
AC009041.2-204ENST00000568394 NCOA1Q15788 1441 aa26.07■■□□□ 1.76
AC009041.2-204ENST00000568394 EFCAB5A4FU69 1503 aa26.06■■□□□ 1.76
AC009041.2-204ENST00000568394 NUP155O75694 1391 aa26.05■■□□□ 1.76
AC009041.2-204ENST00000568394 CRBNQ96SW2 442 aa26.05■■□□□ 1.76
AC009041.2-204ENST00000568394 KDM6BO15054 1643 aa26.04■■□□□ 1.76
AC009041.2-204ENST00000568394 CARD11Q9BXL7 1154 aa26.04■■□□□ 1.76
AC009041.2-204ENST00000568394 FRAT2O75474 233 aaPredicted RBP26.03■■□□□ 1.76
AC009041.2-204ENST00000568394 MAP3K1Q13233 1512 aa26.03■■□□□ 1.76
AC009041.2-204ENST00000568394 UBE2Q2Q8WVN8 375 aa26.01■■□□□ 1.75
AC009041.2-204ENST00000568394 CUL7Q14999 1698 aa26.01■■□□□ 1.75
AC009041.2-204ENST00000568394 PTPN23Q9H3S7 1636 aa26■■□□□ 1.75
AC009041.2-204ENST00000568394 IQGAP2Q13576 1575 aa25.99■■□□□ 1.75
AC009041.2-204ENST00000568394 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
AC009041.2-204ENST00000568394 CC2D1BQ5T0F9 858 aaKnown RBP25.98■■□□□ 1.75
AC009041.2-204ENST00000568394 WASHC2CQ9Y4E1 1318 aa25.95■■□□□ 1.74
AC009041.2-204ENST00000568394 CFAP43Q8NDM7 1665 aa25.95■■□□□ 1.74
AC009041.2-204ENST00000568394 ABCA5Q8WWZ7 1642 aa25.94■■□□□ 1.74
AC009041.2-204ENST00000568394 RNF123Q5XPI4 1314 aa25.94■■□□□ 1.74
AC009041.2-204ENST00000568394 USP47Q96K76 1375 aa25.94■■□□□ 1.74
AC009041.2-204ENST00000568394 ST20-MTHFSA0A0A6YYL1 179 aa25.93■■□□□ 1.74
AC009041.2-204ENST00000568394 MS4A1P11836 297 aa25.92■■□□□ 1.74
AC009041.2-204ENST00000568394 CHGAP10645 457 aaKnown RBP25.92■■□□□ 1.74
AC009041.2-204ENST00000568394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.91■■□□□ 1.74
AC009041.2-204ENST00000568394 ABCC5O15440 1437 aa25.91■■□□□ 1.74
AC009041.2-204ENST00000568394 SLKQ9H2G2 1235 aaPredicted RBP25.91■■□□□ 1.74
AC009041.2-204ENST00000568394 C20orf194Q5TEA3 1177 aa25.9■■□□□ 1.74
AC009041.2-204ENST00000568394 SUPT6HQ7KZ85 1726 aaKnown RBP25.89■■□□□ 1.74
AC009041.2-204ENST00000568394 LRRIQ1Q96JM4 1722 aa25.89■■□□□ 1.74
AC009041.2-204ENST00000568394 TARBP1Q13395 1621 aaKnown RBP25.88■■□□□ 1.73
AC009041.2-204ENST00000568394 NUP153P49790 1475 aaKnown RBP25.87■■□□□ 1.73
AC009041.2-204ENST00000568394 DAPK1P53355 1430 aa25.87■■□□□ 1.73
AC009041.2-204ENST00000568394 EHBP1L1Q8N3D4 1523 aa25.87■■□□□ 1.73
AC009041.2-204ENST00000568394 KDM5BQ9UGL1 1544 aa25.87■■□□□ 1.73
AC009041.2-204ENST00000568394 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
AC009041.2-204ENST00000568394 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
AC009041.2-204ENST00000568394 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
AC009041.2-204ENST00000568394 SPRYD3Q8NCJ5 442 aa25.84■■□□□ 1.73
AC009041.2-204ENST00000568394 NAP1L5Q96NT1 182 aaPredicted RBP25.83■■□□□ 1.73
AC009041.2-204ENST00000568394 ARID4BQ4LE39 1312 aaPredicted RBP25.83■■□□□ 1.73
AC009041.2-204ENST00000568394 UGGT2Q9NYU1 1516 aa25.83■■□□□ 1.73
AC009041.2-204ENST00000568394 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
AC009041.2-204ENST00000568394 MYBBP1AQ9BQG0 1328 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms