RNA–Protein interactions for RNA: ENST00000568309.5

SIN3A-210, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-210ENST00000568309 CFAP74Q9C0B2 1584 aa14.05□□□□□ -0.16
SIN3A-210ENST00000568309 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
SIN3A-210ENST00000568309 HECW1Q76N89 1606 aa14.02□□□□□ -0.16
SIN3A-210ENST00000568309 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.17
SIN3A-210ENST00000568309 NCOA1Q15788 1441 aa13.99□□□□□ -0.17
SIN3A-210ENST00000568309 ATP10AO60312 1499 aa13.99□□□□□ -0.17
SIN3A-210ENST00000568309 C9orf84Q5VXU9 1444 aa13.98□□□□□ -0.17
SIN3A-210ENST00000568309 RAPGEF6Q8TEU7 1601 aa13.96□□□□□ -0.17
SIN3A-210ENST00000568309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-210ENST00000568309 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
SIN3A-210ENST00000568309 HSPA1LP34931 641 aa13.94□□□□□ -0.18
SIN3A-210ENST00000568309 ZNF335Q9H4Z2 1342 aaPredicted RBP13.93□□□□□ -0.18
SIN3A-210ENST00000568309 C3P01024 1663 aa13.93□□□□□ -0.18
SIN3A-210ENST00000568309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.93□□□□□ -0.188e-8■■■□□ 18.8
SIN3A-210ENST00000568309 TRAPPC8Q9Y2L5 1435 aa13.92□□□□□ -0.18
SIN3A-210ENST00000568309 PHF23Q9BUL5 403 aaPredicted RBP13.92□□□□□ -0.18
SIN3A-210ENST00000568309 SCAPERQ9BY12 1400 aa13.91□□□□□ -0.18
SIN3A-210ENST00000568309 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
SIN3A-210ENST00000568309 NUP153P49790 1475 aaKnown RBP13.91□□□□□ -0.18
SIN3A-210ENST00000568309 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.19
SIN3A-210ENST00000568309 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
SIN3A-210ENST00000568309 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
SIN3A-210ENST00000568309 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
SIN3A-210ENST00000568309 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
SIN3A-210ENST00000568309 REREQ9P2R6 1566 aa13.84□□□□□ -0.19
SIN3A-210ENST00000568309 PLCH2O75038 1416 aa13.83□□□□□ -0.2
SIN3A-210ENST00000568309 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
SIN3A-210ENST00000568309 PIP4K2BP78356 416 aa13.83□□□□□ -0.2
SIN3A-210ENST00000568309 AGLP35573 1532 aa13.82□□□□□ -0.2
SIN3A-210ENST00000568309 TOM1O60784 492 aa13.82□□□□□ -0.2
SIN3A-210ENST00000568309 PKD2Q13563 968 aa13.82□□□□□ -0.2
SIN3A-210ENST00000568309 PLA2R1Q13018 1463 aa13.81□□□□□ -0.2
SIN3A-210ENST00000568309 DIP2CQ9Y2E4 1556 aa13.81□□□□□ -0.2
SIN3A-210ENST00000568309 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
SIN3A-210ENST00000568309 NPATQ14207 1427 aa13.81□□□□□ -0.2
SIN3A-210ENST00000568309 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
SIN3A-210ENST00000568309 TCOF1Q13428 1488 aaKnown RBP13.8□□□□□ -0.2
SIN3A-210ENST00000568309 ZNF518AQ6AHZ1 1483 aa13.8□□□□□ -0.2
SIN3A-210ENST00000568309 KDM5CP41229 1560 aa13.8□□□□□ -0.2
SIN3A-210ENST00000568309 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.21
SIN3A-210ENST00000568309 ZNF142P52746 1687 aaPredicted RBP13.76□□□□□ -0.21
SIN3A-210ENST00000568309 CPS1P31327 1500 aa13.76□□□□□ -0.21
SIN3A-210ENST00000568309 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
SIN3A-210ENST00000568309 ABCA6Q8N139 1617 aa13.75□□□□□ -0.21
SIN3A-210ENST00000568309 RGS17Q9UGC6 210 aaPredicted RBP13.75□□□□□ -0.21
SIN3A-210ENST00000568309 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
SIN3A-210ENST00000568309 MYO5CQ9NQX4 1742 aa13.74□□□□□ -0.21
SIN3A-210ENST00000568309 AFAP1Q8N556 730 aa13.74□□□□□ -0.21
SIN3A-210ENST00000568309 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
SIN3A-210ENST00000568309 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
SIN3A-210ENST00000568309 PTPRKQ15262 1439 aa13.73□□□□□ -0.21
SIN3A-210ENST00000568309 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
SIN3A-210ENST00000568309 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
SIN3A-210ENST00000568309 SUPT6HQ7KZ85 1726 aaKnown RBP13.72□□□□□ -0.21
SIN3A-210ENST00000568309 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
SIN3A-210ENST00000568309 ZMYM3Q14202 1370 aa13.7□□□□□ -0.22
SIN3A-210ENST00000568309 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
SIN3A-210ENST00000568309 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
SIN3A-210ENST00000568309 ARHGAP5Q13017 1502 aa13.65□□□□□ -0.22
SIN3A-210ENST00000568309 NEURL4Q96JN8 1562 aa13.63□□□□□ -0.23
SIN3A-210ENST00000568309 POTEAQ6S8J7 498 aa13.63□□□□□ -0.23
SIN3A-210ENST00000568309 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
SIN3A-210ENST00000568309 POLR1AO95602 1720 aaPredicted RBP13.62□□□□□ -0.23
SIN3A-210ENST00000568309 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
SIN3A-210ENST00000568309 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
SIN3A-210ENST00000568309 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
SIN3A-210ENST00000568309 KIF14Q15058 1648 aa13.61□□□□□ -0.23
SIN3A-210ENST00000568309 CLTCQ00610 1675 aaKnown RBP13.61□□□□□ -0.23
SIN3A-210ENST00000568309 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
SIN3A-210ENST00000568309 ABCC1P33527 1531 aa13.59□□□□□ -0.23
SIN3A-210ENST00000568309 ITSN2Q9NZM3 1697 aa13.58□□□□□ -0.24
SIN3A-210ENST00000568309 SETD1AO15047 1707 aaKnown RBP13.58□□□□□ -0.24
SIN3A-210ENST00000568309 RNF17Q9BXT8 1623 aaKnown RBP13.57□□□□□ -0.24
SIN3A-210ENST00000568309 RANGAP1P46060 587 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-210ENST00000568309 CDC42BPBQ9Y5S2 1711 aa13.56□□□□□ -0.24
SIN3A-210ENST00000568309 CDK11AQ9UQ88 783 aaPredicted RBP13.55□□□□□ -0.24
SIN3A-210ENST00000568309 TROQ12816 1431 aaPredicted RBP13.55□□□□□ -0.24
SIN3A-210ENST00000568309 LRRC7Q96NW7 1537 aa13.54□□□□□ -0.24
SIN3A-210ENST00000568309 SYNMO15061 1565 aa13.53□□□□□ -0.24
SIN3A-210ENST00000568309 MED14O60244 1454 aa13.52□□□□□ -0.25
SIN3A-210ENST00000568309 PREX2Q70Z35 1606 aa13.52□□□□□ -0.25
SIN3A-210ENST00000568309 STRCP1A6NGW2 1772 aa13.51□□□□□ -0.25
SIN3A-210ENST00000568309 PLXNC1O60486 1568 aa13.51□□□□□ -0.25
SIN3A-210ENST00000568309 SAMD9LQ8IVG5 1584 aa13.51□□□□□ -0.25
SIN3A-210ENST00000568309 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
SIN3A-210ENST00000568309 CLIP1P30622 1438 aa13.51□□□□□ -0.25
SIN3A-210ENST00000568309 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
SIN3A-210ENST00000568309 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
SIN3A-210ENST00000568309 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
SIN3A-210ENST00000568309 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
SIN3A-210ENST00000568309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.47□□□□□ -0.259e-8■■■□□ 15.5
SIN3A-210ENST00000568309 GGT6Q6P531 493 aa13.47□□□□□ -0.25
SIN3A-210ENST00000568309 A2MP01023 1474 aa13.47□□□□□ -0.25
SIN3A-210ENST00000568309 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
SIN3A-210ENST00000568309 TNRQ92752 1358 aa13.46□□□□□ -0.25
SIN3A-210ENST00000568309 SPAG9O60271 1321 aaKnown RBP13.46□□□□□ -0.25
SIN3A-210ENST00000568309 FAM135BQ49AJ0 1406 aa13.46□□□□□ -0.26
SIN3A-210ENST00000568309 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
SIN3A-210ENST00000568309 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
SIN3A-210ENST00000568309 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms