RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SAMD9Q5K651 1589 aa10.74□□□□□ -0.69
ATXN3-250ENST00000568290 NEFLP07196 543 aa10.74□□□□□ -0.69
ATXN3-250ENST00000568290 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
ATXN3-250ENST00000568290 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
ATXN3-250ENST00000568290 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
ATXN3-250ENST00000568290 MIA2Q96PC5 1412 aa10.73□□□□□ -0.69
ATXN3-250ENST00000568290 CDK11AQ9UQ88 783 aaPredicted RBP10.72□□□□□ -0.69
ATXN3-250ENST00000568290 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.69
ATXN3-250ENST00000568290 HECW1Q76N89 1606 aa10.71□□□□□ -0.69
ATXN3-250ENST00000568290 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
ATXN3-250ENST00000568290 GRIN2BQ13224 1484 aa10.69□□□□□ -0.7
ATXN3-250ENST00000568290 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
ATXN3-250ENST00000568290 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
ATXN3-250ENST00000568290 NCOA2Q15596 1464 aa10.68□□□□□ -0.7
ATXN3-250ENST00000568290 TCOF1Q13428 1488 aaKnown RBP10.67□□□□□ -0.7
ATXN3-250ENST00000568290 PTPN23Q9H3S7 1636 aa10.65□□□□□ -0.7
ATXN3-250ENST00000568290 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
ATXN3-250ENST00000568290 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
ATXN3-250ENST00000568290 IQGAP2Q13576 1575 aa10.64□□□□□ -0.71
ATXN3-250ENST00000568290 TDRD9Q8NDG6 1382 aaKnown RBP10.64□□□□□ -0.71
ATXN3-250ENST00000568290 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
ATXN3-250ENST00000568290 ERICH6BQ5W0A0 696 aa10.63□□□□□ -0.71
ATXN3-250ENST00000568290 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
ATXN3-250ENST00000568290 NAIPQ13075 1403 aa10.63□□□□□ -0.71
ATXN3-250ENST00000568290 ROCK1Q13464 1354 aa10.63□□□□□ -0.71
ATXN3-250ENST00000568290 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
ATXN3-250ENST00000568290 NESP48681 1621 aa10.62□□□□□ -0.71
ATXN3-250ENST00000568290 MRC2Q9UBG0 1479 aa10.62□□□□□ -0.71
ATXN3-250ENST00000568290 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
ATXN3-250ENST00000568290 CHRDL2Q6WN34 429 aa10.61□□□□□ -0.71
ATXN3-250ENST00000568290 TARBP1Q13395 1621 aaKnown RBP10.6□□□□□ -0.71
ATXN3-250ENST00000568290 FXR2P51116 673 aaKnown RBP eCLIP10.6□□□□□ -0.71
ATXN3-250ENST00000568290 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-250ENST00000568290 SIN3AQ96ST3 1273 aa10.6□□□□□ -0.71
ATXN3-250ENST00000568290 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
ATXN3-250ENST00000568290 EIF4G2P78344 907 aaKnown RBP eCLIP10.59□□□□□ -0.71
ATXN3-250ENST00000568290 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
ATXN3-250ENST00000568290 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
ATXN3-250ENST00000568290 EPRSP07814 1512 aaKnown RBP10.58□□□□□ -0.72
ATXN3-250ENST00000568290 KIAA0586Q9BVV6 1533 aa10.58□□□□□ -0.72
ATXN3-250ENST00000568290 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
ATXN3-250ENST00000568290 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
ATXN3-250ENST00000568290 PBRM1Q86U86 1689 aa10.57□□□□□ -0.72
ATXN3-250ENST00000568290 MNX1P50219 401 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-250ENST00000568290 CARMIL2Q6F5E8 1435 aa10.55□□□□□ -0.72
ATXN3-250ENST00000568290 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-250ENST00000568290 WDR62O43379 1518 aa10.53□□□□□ -0.72
ATXN3-250ENST00000568290 PIP4P2Q8N4L2 257 aa10.52□□□□□ -0.73
ATXN3-250ENST00000568290 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-250ENST00000568290 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
ATXN3-250ENST00000568290 ITSN2Q9NZM3 1697 aa10.5□□□□□ -0.73
ATXN3-250ENST00000568290 DAPK1P53355 1430 aa10.5□□□□□ -0.73
ATXN3-250ENST00000568290 PTPRKQ15262 1439 aa10.5□□□□□ -0.73
ATXN3-250ENST00000568290 DNMT1P26358 1616 aaKnown RBP10.48□□□□□ -0.73
ATXN3-250ENST00000568290 RSPH4AQ5TD94 716 aa10.48□□□□□ -0.73
ATXN3-250ENST00000568290 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
ATXN3-250ENST00000568290 RRP7BPQ9NSQ0 103 aa10.48□□□□□ -0.73
ATXN3-250ENST00000568290 ROCK2O75116 1388 aaKnown RBP10.48□□□□□ -0.73
ATXN3-250ENST00000568290 ANKRD30AQ9BXX3 1397 aa10.48□□□□□ -0.73
ATXN3-250ENST00000568290 TROQ12816 1431 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-250ENST00000568290 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
ATXN3-250ENST00000568290 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
ATXN3-250ENST00000568290 CNTLNQ9NXG0 1405 aa10.47□□□□□ -0.73
ATXN3-250ENST00000568290 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
ATXN3-250ENST00000568290 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
ATXN3-250ENST00000568290 GRIN2AQ12879 1464 aa10.46□□□□□ -0.74
ATXN3-250ENST00000568290 LRRIQ1Q96JM4 1722 aa10.45□□□□□ -0.74
ATXN3-250ENST00000568290 HSPA5P11021 654 aaKnown RBP10.45□□□□□ -0.74
ATXN3-250ENST00000568290 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-250ENST00000568290 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-250ENST00000568290 CHIC2Q9UKJ5 165 aa10.45□□□□□ -0.74
ATXN3-250ENST00000568290 ADGRL2O95490 1459 aa10.44□□□□□ -0.74
ATXN3-250ENST00000568290 KTN1Q86UP2 1357 aaKnown RBP10.44□□□□□ -0.74
ATXN3-250ENST00000568290 ANKRD30BQ9BXX2 1392 aa10.44□□□□□ -0.74
ATXN3-250ENST00000568290 PLEKHD1A6NEE1 506 aa10.44□□□□□ -0.74
ATXN3-250ENST00000568290 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
ATXN3-250ENST00000568290 SYNJ2O15056 1496 aa10.43□□□□□ -0.74
ATXN3-250ENST00000568290 TSPY4P0CV99 314 aa10.43□□□□□ -0.74
ATXN3-250ENST00000568290 TSPY10P0CW01 314 aa10.43□□□□□ -0.74
ATXN3-250ENST00000568290 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
ATXN3-250ENST00000568290 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
ATXN3-250ENST00000568290 ABCC5O15440 1437 aa10.42□□□□□ -0.74
ATXN3-250ENST00000568290 NCOA1Q15788 1441 aa10.42□□□□□ -0.74
ATXN3-250ENST00000568290 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
ATXN3-250ENST00000568290 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
ATXN3-250ENST00000568290 CCDC7Q96M83 1385 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 DISP1Q96F81 1524 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 NUP153P49790 1475 aaKnown RBP10.41□□□□□ -0.74
ATXN3-250ENST00000568290 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
ATXN3-250ENST00000568290 TSHZ2Q9NRE2 1034 aa10.4□□□□□ -0.74
ATXN3-250ENST00000568290 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
ATXN3-250ENST00000568290 ZBED9Q6R2W3 1325 aa10.39□□□□□ -0.75
ATXN3-250ENST00000568290 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
ATXN3-250ENST00000568290 NUBP1P53384 320 aa10.39□□□□□ -0.75
ATXN3-250ENST00000568290 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms