RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-206ENST00000564934 CEBPAP49715 358 aaPredicted RBP22.54■■□□□ 1.2
RPAP1-206ENST00000564934 NUP153P49790 1475 aaKnown RBP22.53■■□□□ 1.2
RPAP1-206ENST00000564934 HECW1Q76N89 1606 aa22.52■■□□□ 1.2
RPAP1-206ENST00000564934 UHRF1BP1Q6BDS2 1440 aa22.49■■□□□ 1.19
RPAP1-206ENST00000564934 SAMD9Q5K651 1589 aa22.49■■□□□ 1.19
RPAP1-206ENST00000564934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.48■■□□□ 1.19
RPAP1-206ENST00000564934 PTPRTO14522 1441 aa22.48■■□□□ 1.19
RPAP1-206ENST00000564934 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
RPAP1-206ENST00000564934 LTBP4Q8N2S1 1624 aa22.46■■□□□ 1.19
RPAP1-206ENST00000564934 ATP10AO60312 1499 aa22.45■■□□□ 1.18
RPAP1-206ENST00000564934 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
RPAP1-206ENST00000564934 IQSEC2Q5JU85 1478 aa22.43■■□□□ 1.18
RPAP1-206ENST00000564934 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
RPAP1-206ENST00000564934 SETD1BQ9UPS6 1966 aaKnown RBP22.38■■□□□ 1.17
RPAP1-206ENST00000564934 PLCH2O75038 1416 aa22.32■■□□□ 1.16
RPAP1-206ENST00000564934 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
RPAP1-206ENST00000564934 NCOA1Q15788 1441 aa22.31■■□□□ 1.16
RPAP1-206ENST00000564934 UBAP1LF5GYI3 381 aa22.29■■□□□ 1.16
RPAP1-206ENST00000564934 C3P01024 1663 aa22.29■■□□□ 1.16
RPAP1-206ENST00000564934 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
RPAP1-206ENST00000564934 ZNF518AQ6AHZ1 1483 aa22.24■■□□□ 1.15
RPAP1-206ENST00000564934 CDK13Q14004 1512 aaKnown RBP22.23■■□□□ 1.15
RPAP1-206ENST00000564934 ZNF335Q9H4Z2 1342 aaPredicted RBP22.23■■□□□ 1.15
RPAP1-206ENST00000564934 EFCAB2Q5VUJ9 269 aa22.22■■□□□ 1.15
RPAP1-206ENST00000564934 DIP2CQ9Y2E4 1556 aa22.21■■□□□ 1.15
RPAP1-206ENST00000564934 AFAP1Q8N556 730 aa22.21■■□□□ 1.15
RPAP1-206ENST00000564934 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
RPAP1-206ENST00000564934 KDM5CP41229 1560 aa22.21■■□□□ 1.15
RPAP1-206ENST00000564934 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
RPAP1-206ENST00000564934 MED1Q15648 1581 aaPredicted RBP22.2■■□□□ 1.14
RPAP1-206ENST00000564934 CAMSAP1Q5T5Y3 1602 aa22.2■■□□□ 1.14
RPAP1-206ENST00000564934 MYO5CQ9NQX4 1742 aa22.18■■□□□ 1.14
RPAP1-206ENST00000564934 REREQ9P2R6 1566 aa22.18■■□□□ 1.14
RPAP1-206ENST00000564934 NCKAP5LQ9HCH0 1330 aa22.15■■□□□ 1.14
RPAP1-206ENST00000564934 ABCA6Q8N139 1617 aa22.15■■□□□ 1.14
RPAP1-206ENST00000564934 AGLP35573 1532 aa22.13■■□□□ 1.13
RPAP1-206ENST00000564934 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
RPAP1-206ENST00000564934 HSPA1LP34931 641 aa22.12■■□□□ 1.13
RPAP1-206ENST00000564934 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
RPAP1-206ENST00000564934 CNTLNQ9NXG0 1405 aa22.11■■□□□ 1.13
RPAP1-206ENST00000564934 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
RPAP1-206ENST00000564934 MLH3Q9UHC1 1453 aa22.09■■□□□ 1.13
RPAP1-206ENST00000564934 NPATQ14207 1427 aa22.08■■□□□ 1.13
RPAP1-206ENST00000564934 KIF14Q15058 1648 aa22.08■■□□□ 1.13
RPAP1-206ENST00000564934 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
RPAP1-206ENST00000564934 PKD2Q13563 968 aa22.04■■□□□ 1.12
RPAP1-206ENST00000564934 PHF23Q9BUL5 403 aaPredicted RBP22.04■■□□□ 1.12
RPAP1-206ENST00000564934 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
RPAP1-206ENST00000564934 ATP1B4Q9UN42 357 aaPredicted RBP22.02■■□□□ 1.12
RPAP1-206ENST00000564934 TCOF1Q13428 1488 aaKnown RBP22.01■■□□□ 1.11
RPAP1-206ENST00000564934 ZMYM3Q14202 1370 aa22■■□□□ 1.11
RPAP1-206ENST00000564934 CDK11AQ9UQ88 783 aaPredicted RBP22■■□□□ 1.11
RPAP1-206ENST00000564934 MROH2AA6NES4 1674 aa22■■□□□ 1.11
RPAP1-206ENST00000564934 MYO3AQ8NEV4 1616 aa21.99■■□□□ 1.11
RPAP1-206ENST00000564934 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
RPAP1-206ENST00000564934 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
RPAP1-206ENST00000564934 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
RPAP1-206ENST00000564934 TOM1O60784 492 aa21.97■■□□□ 1.11
RPAP1-206ENST00000564934 ABCC1P33527 1531 aa21.96■■□□□ 1.11
RPAP1-206ENST00000564934 CEP170BQ9Y4F5 1589 aaPredicted RBP21.96■■□□□ 1.11
RPAP1-206ENST00000564934 SUPT6HQ7KZ85 1726 aaKnown RBP21.96■■□□□ 1.11
RPAP1-206ENST00000564934 KIDINS220Q9ULH0 1771 aa21.96■■□□□ 1.11
RPAP1-206ENST00000564934 CDC42BPBQ9Y5S2 1711 aa21.94■■□□□ 1.1
RPAP1-206ENST00000564934 CLIP1P30622 1438 aa21.94■■□□□ 1.1
RPAP1-206ENST00000564934 ITSN2Q9NZM3 1697 aa21.93■■□□□ 1.1
RPAP1-206ENST00000564934 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
RPAP1-206ENST00000564934 CPS1P31327 1500 aa21.9■■□□□ 1.1
RPAP1-206ENST00000564934 PTPRKQ15262 1439 aa21.89■■□□□ 1.1
RPAP1-206ENST00000564934 CLTCQ00610 1675 aaKnown RBP21.89■■□□□ 1.1
RPAP1-206ENST00000564934 PREX2Q70Z35 1606 aa21.89■■□□□ 1.09
RPAP1-206ENST00000564934 EEA1Q15075 1411 aa21.86■■□□□ 1.09
RPAP1-206ENST00000564934 SHANK2Q9UPX8 1470 aa21.84■■□□□ 1.09
RPAP1-206ENST00000564934 SAMD9LQ8IVG5 1584 aa21.83■■□□□ 1.09
RPAP1-206ENST00000564934 ALKQ9UM73 1620 aa21.82■■□□□ 1.08
RPAP1-206ENST00000564934 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
RPAP1-206ENST00000564934 A2ML1A8K2U0 1454 aa21.81■■□□□ 1.08
RPAP1-206ENST00000564934 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
RPAP1-206ENST00000564934 NEURL4Q96JN8 1562 aa21.8■■□□□ 1.08
RPAP1-206ENST00000564934 LRRIQ1Q96JM4 1722 aa21.8■■□□□ 1.08
RPAP1-206ENST00000564934 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
RPAP1-206ENST00000564934 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
RPAP1-206ENST00000564934 POLR1AO95602 1720 aaPredicted RBP21.77■■□□□ 1.08
RPAP1-206ENST00000564934 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.08
RPAP1-206ENST00000564934 GGT6Q6P531 493 aa21.77■■□□□ 1.08
RPAP1-206ENST00000564934 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
RPAP1-206ENST00000564934 RGS17Q9UGC6 210 aaPredicted RBP21.76■■□□□ 1.07
RPAP1-206ENST00000564934 ZNF777Q9ULD5 760 aaPredicted RBP21.75■■□□□ 1.07
RPAP1-206ENST00000564934 A2MP01023 1474 aa21.75■■□□□ 1.07
RPAP1-206ENST00000564934 VWDEQ8N2E2 1590 aa21.74■■□□□ 1.07
RPAP1-206ENST00000564934 CDC42BPAQ5VT25 1732 aa21.74■■□□□ 1.07
RPAP1-206ENST00000564934 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
RPAP1-206ENST00000564934 HNRNPMP52272 730 aaKnown RBP eCLIP21.7■■□□□ 1.06
RPAP1-206ENST00000564934 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
RPAP1-206ENST00000564934 INO80Q9ULG1 1556 aaPredicted RBP21.7■■□□□ 1.06
RPAP1-206ENST00000564934 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
RPAP1-206ENST00000564934 TNRQ92752 1358 aa21.66■■□□□ 1.06
RPAP1-206ENST00000564934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.66■■□□□ 1.06
RPAP1-206ENST00000564934 ANKLE2Q86XL3 938 aa21.66■■□□□ 1.06
RPAP1-206ENST00000564934 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.06
RPAP1-206ENST00000564934 NPHP4O75161 1426 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms