RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 SCAPERQ9BY12 1400 aa29.91■■■□□ 2.38
TRAF7-202ENST00000564067 RANGAP1P46060 587 aaPredicted RBP29.91■■■□□ 2.38
TRAF7-202ENST00000564067 SIGLEC1Q9BZZ2 1709 aa29.91■■■□□ 2.38
TRAF7-202ENST00000564067 ATP10AO60312 1499 aa29.89■■■□□ 2.38
TRAF7-202ENST00000564067 ARHGEF12Q9NZN5 1544 aa29.88■■■□□ 2.37
TRAF7-202ENST00000564067 PLCH2O75038 1416 aa29.88■■■□□ 2.37
TRAF7-202ENST00000564067 PREX1Q8TCU6 1659 aa29.87■■■□□ 2.37
TRAF7-202ENST00000564067 C9orf84Q5VXU9 1444 aa29.86■■■□□ 2.37
TRAF7-202ENST00000564067 ILDR2Q71H61 639 aa29.84■■■□□ 2.37
TRAF7-202ENST00000564067 EFCAB2Q5VUJ9 269 aa29.81■■■□□ 2.36
TRAF7-202ENST00000564067 EEA1Q15075 1411 aa29.8■■■□□ 2.36
TRAF7-202ENST00000564067 CEBPAP49715 358 aaPredicted RBP29.79■■■□□ 2.36
TRAF7-202ENST00000564067 UHRF1BP1Q6BDS2 1440 aa29.79■■■□□ 2.36
TRAF7-202ENST00000564067 SETD1BQ9UPS6 1966 aaKnown RBP29.75■■■□□ 2.35
TRAF7-202ENST00000564067 STRCQ7RTU9 1775 aa29.72■■■□□ 2.35
TRAF7-202ENST00000564067 CDK13Q14004 1512 aaKnown RBP29.72■■■□□ 2.35
TRAF7-202ENST00000564067 CDK11AQ9UQ88 783 aaPredicted RBP29.72■■■□□ 2.35
TRAF7-202ENST00000564067 ZNF518AQ6AHZ1 1483 aa29.72■■■□□ 2.35
TRAF7-202ENST00000564067 PTPRTO14522 1441 aa29.71■■■□□ 2.35
TRAF7-202ENST00000564067 MYO5CQ9NQX4 1742 aa29.65■■■□□ 2.34
TRAF7-202ENST00000564067 MYT1LQ9UL68 1186 aa29.64■■■□□ 2.34
TRAF7-202ENST00000564067 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.33
TRAF7-202ENST00000564067 ESF1Q9H501 851 aaKnown RBP29.63■■■□□ 2.33
TRAF7-202ENST00000564067 AFAP1Q8N556 730 aa29.62■■■□□ 2.33
TRAF7-202ENST00000564067 KDM5CP41229 1560 aa29.61■■■□□ 2.33
TRAF7-202ENST00000564067 ATP1B4Q9UN42 357 aaPredicted RBP29.61■■■□□ 2.33
TRAF7-202ENST00000564067 FMN1Q68DA7 1419 aa29.61■■■□□ 2.33
TRAF7-202ENST00000564067 IQSEC2Q5JU85 1478 aa29.61■■■□□ 2.33
TRAF7-202ENST00000564067 REREQ9P2R6 1566 aa29.59■■■□□ 2.33
TRAF7-202ENST00000564067 ARHGAP5Q13017 1502 aa29.56■■■□□ 2.32
TRAF7-202ENST00000564067 TRAPPC8Q9Y2L5 1435 aa29.56■■■□□ 2.32
TRAF7-202ENST00000564067 KIF14Q15058 1648 aa29.55■■■□□ 2.32
TRAF7-202ENST00000564067 DIP2CQ9Y2E4 1556 aa29.54■■■□□ 2.32
TRAF7-202ENST00000564067 MLH3Q9UHC1 1453 aa29.54■■■□□ 2.32
TRAF7-202ENST00000564067 CLIP1P30622 1438 aa29.54■■■□□ 2.32
TRAF7-202ENST00000564067 TROQ12816 1431 aaPredicted RBP29.53■■■□□ 2.32
TRAF7-202ENST00000564067 LTBP4Q8N2S1 1624 aa29.52■■■□□ 2.32
TRAF7-202ENST00000564067 AGLP35573 1532 aa29.51■■■□□ 2.32
TRAF7-202ENST00000564067 C3P01024 1663 aa29.51■■■□□ 2.31
TRAF7-202ENST00000564067 CNTLNQ9NXG0 1405 aa29.5■■■□□ 2.31
TRAF7-202ENST00000564067 NCOA1Q15788 1441 aa29.48■■■□□ 2.31
TRAF7-202ENST00000564067 ABCA6Q8N139 1617 aa29.43■■■□□ 2.3
TRAF7-202ENST00000564067 UBTFP17480 764 aaKnown RBP29.41■■■□□ 2.3
TRAF7-202ENST00000564067 NPATQ14207 1427 aa29.39■■■□□ 2.3
TRAF7-202ENST00000564067 ARHGAP35Q9NRY4 1499 aa29.37■■■□□ 2.29
TRAF7-202ENST00000564067 CDC42BPBQ9Y5S2 1711 aa29.35■■■□□ 2.29
TRAF7-202ENST00000564067 ABCC1P33527 1531 aa29.35■■■□□ 2.29
TRAF7-202ENST00000564067 CAMSAP1Q5T5Y3 1602 aa29.34■■■□□ 2.29
TRAF7-202ENST00000564067 UBAP1LF5GYI3 381 aa29.33■■■□□ 2.29
TRAF7-202ENST00000564067 PREX2Q70Z35 1606 aa29.31■■■□□ 2.28
TRAF7-202ENST00000564067 ZMYM3Q14202 1370 aa29.3■■■□□ 2.28
TRAF7-202ENST00000564067 MROH2AA6NES4 1674 aa29.29■■■□□ 2.28
TRAF7-202ENST00000564067 PKD2Q13563 968 aa29.29■■■□□ 2.28
TRAF7-202ENST00000564067 KIDINS220Q9ULH0 1771 aa29.28■■■□□ 2.28
TRAF7-202ENST00000564067 ITSN2Q9NZM3 1697 aa29.28■■■□□ 2.28
TRAF7-202ENST00000564067 ZNF335Q9H4Z2 1342 aaPredicted RBP29.26■■■□□ 2.27
TRAF7-202ENST00000564067 NCKAP5LQ9HCH0 1330 aa29.26■■■□□ 2.27
TRAF7-202ENST00000564067 PLA2R1Q13018 1463 aa29.24■■■□□ 2.27
TRAF7-202ENST00000564067 CCDC18Q5T9S5 1454 aa29.23■■■□□ 2.27
TRAF7-202ENST00000564067 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
TRAF7-202ENST00000564067 SPAG9O60271 1321 aaKnown RBP29.2■■■□□ 2.26
TRAF7-202ENST00000564067 LRRIQ1Q96JM4 1722 aa29.19■■■□□ 2.26
TRAF7-202ENST00000564067 SAMD9LQ8IVG5 1584 aa29.18■■■□□ 2.26
TRAF7-202ENST00000564067 TCOF1Q13428 1488 aaKnown RBP29.16■■■□□ 2.26
TRAF7-202ENST00000564067 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
TRAF7-202ENST00000564067 ZNF777Q9ULD5 760 aaPredicted RBP29.15■■■□□ 2.26
TRAF7-202ENST00000564067 PPP6R1Q9UPN7 881 aa29.15■■■□□ 2.26
TRAF7-202ENST00000564067 ZNF142P52746 1687 aaPredicted RBP29.15■■■□□ 2.26
TRAF7-202ENST00000564067 CDC42BPAQ5VT25 1732 aa29.12■■■□□ 2.25
TRAF7-202ENST00000564067 CEP170BQ9Y4F5 1589 aaPredicted RBP29.12■■■□□ 2.25
TRAF7-202ENST00000564067 MYO3AQ8NEV4 1616 aa29.12■■■□□ 2.25
TRAF7-202ENST00000564067 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
TRAF7-202ENST00000564067 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
TRAF7-202ENST00000564067 HNRNPMP52272 730 aaKnown RBP eCLIP29.08■■■□□ 2.25
TRAF7-202ENST00000564067 SYCP2Q9BX26 1530 aa29.08■■■□□ 2.25
TRAF7-202ENST00000564067 CLTCQ00610 1675 aaKnown RBP29.08■■■□□ 2.25
TRAF7-202ENST00000564067 A2MP01023 1474 aa29.07■■■□□ 2.24
TRAF7-202ENST00000564067 PLEKHH2Q8IVE3 1493 aa29.07■■■□□ 2.24
TRAF7-202ENST00000564067 KIAA1107Q9UPP5 1409 aa29.07■■■□□ 2.24
TRAF7-202ENST00000564067 ATP7AQ04656 1500 aa29.06■■■□□ 2.24
TRAF7-202ENST00000564067 TOM1O60784 492 aa29.06■■■□□ 2.24
TRAF7-202ENST00000564067 GGT6Q6P531 493 aa29.06■■■□□ 2.24
TRAF7-202ENST00000564067 PLXNC1O60486 1568 aa29.05■■■□□ 2.24
TRAF7-202ENST00000564067 GPATCH8Q9UKJ3 1502 aaKnown RBP29.04■■■□□ 2.24
TRAF7-202ENST00000564067 SCAF1Q9H7N4 1312 aaKnown RBP29.03■■■□□ 2.24
TRAF7-202ENST00000564067 HSPA1LP34931 641 aa29.02■■■□□ 2.24
TRAF7-202ENST00000564067 A2ML1A8K2U0 1454 aa29■■■□□ 2.23
TRAF7-202ENST00000564067 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
TRAF7-202ENST00000564067 CPS1P31327 1500 aa28.99■■■□□ 2.23
TRAF7-202ENST00000564067 PIP4K2BP78356 416 aa28.99■■■□□ 2.23
TRAF7-202ENST00000564067 INO80Q9ULG1 1556 aaPredicted RBP28.99■■■□□ 2.23
TRAF7-202ENST00000564067 FYCO1Q9BQS8 1478 aa28.98■■■□□ 2.23
TRAF7-202ENST00000564067 MED1Q15648 1581 aaPredicted RBP28.98■■■□□ 2.23
TRAF7-202ENST00000564067 CCNB3Q8WWL7 1395 aa28.93■■■□□ 2.22
TRAF7-202ENST00000564067 DNMT1P26358 1616 aaKnown RBP28.93■■■□□ 2.22
TRAF7-202ENST00000564067 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
TRAF7-202ENST00000564067 ADGBQ8N7X0 1667 aa28.9■■■□□ 2.22
TRAF7-202ENST00000564067 PHF23Q9BUL5 403 aaPredicted RBP28.9■■■□□ 2.22
TRAF7-202ENST00000564067 ANKLE2Q86XL3 938 aa28.87■■■□□ 2.21
TRAF7-202ENST00000564067 TNRQ92752 1358 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms