RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 FER1L4A9Z1Z3 1794 aa24.8■■□□□ 1.56
SCAPER-209ENST00000563919 PLCH2O75038 1416 aa24.79■■□□□ 1.56
SCAPER-209ENST00000563919 CDK13Q14004 1512 aaKnown RBP24.76■■□□□ 1.55
SCAPER-209ENST00000563919 ATP10AO60312 1499 aa24.76■■□□□ 1.55
SCAPER-209ENST00000563919 ARHGEF12Q9NZN5 1544 aa24.75■■□□□ 1.55
SCAPER-209ENST00000563919 C9orf84Q5VXU9 1444 aa24.71■■□□□ 1.55
SCAPER-209ENST00000563919 EFCAB2Q5VUJ9 269 aa24.71■■□□□ 1.55
SCAPER-209ENST00000563919 CEBPAP49715 358 aaPredicted RBP24.7■■□□□ 1.54
SCAPER-209ENST00000563919 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
SCAPER-209ENST00000563919 DMRT2Q9Y5R5 561 aa24.66■■□□□ 1.54
SCAPER-209ENST00000563919 ATP1B4Q9UN42 357 aaPredicted RBP24.64■■□□□ 1.54
SCAPER-209ENST00000563919 MYO5CQ9NQX4 1742 aa24.64■■□□□ 1.53
SCAPER-209ENST00000563919 STRCQ7RTU9 1775 aa24.62■■□□□ 1.53
SCAPER-209ENST00000563919 SETD1BQ9UPS6 1966 aaKnown RBP24.62■■□□□ 1.53
SCAPER-209ENST00000563919 AFAP1Q8N556 730 aa24.62■■□□□ 1.53
SCAPER-209ENST00000563919 CDK11AQ9UQ88 783 aaPredicted RBP24.62■■□□□ 1.53
SCAPER-209ENST00000563919 ZNF518AQ6AHZ1 1483 aa24.62■■□□□ 1.53
SCAPER-209ENST00000563919 FMN1Q68DA7 1419 aa24.6■■□□□ 1.53
SCAPER-209ENST00000563919 UHRF1BP1Q6BDS2 1440 aa24.59■■□□□ 1.53
SCAPER-209ENST00000563919 KIF14Q15058 1648 aa24.57■■□□□ 1.52
SCAPER-209ENST00000563919 DISP3Q9P2K9 1392 aa24.57■■□□□ 1.52
SCAPER-209ENST00000563919 ILDR2Q71H61 639 aa24.57■■□□□ 1.52
SCAPER-209ENST00000563919 KDM5CP41229 1560 aa24.57■■□□□ 1.52
SCAPER-209ENST00000563919 ARHGAP5Q13017 1502 aa24.55■■□□□ 1.52
SCAPER-209ENST00000563919 TROQ12816 1431 aaPredicted RBP24.54■■□□□ 1.52
SCAPER-209ENST00000563919 MYT1LQ9UL68 1186 aa24.54■■□□□ 1.52
SCAPER-209ENST00000563919 ARHGAP35Q9NRY4 1499 aa24.52■■□□□ 1.52
SCAPER-209ENST00000563919 DIP2CQ9Y2E4 1556 aa24.52■■□□□ 1.52
SCAPER-209ENST00000563919 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
SCAPER-209ENST00000563919 REREQ9P2R6 1566 aa24.51■■□□□ 1.51
SCAPER-209ENST00000563919 PTPRTO14522 1441 aa24.51■■□□□ 1.51
SCAPER-209ENST00000563919 SOCS7O14512 581 aa24.5■■□□□ 1.51
SCAPER-209ENST00000563919 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
SCAPER-209ENST00000563919 CLIP1P30622 1438 aa24.49■■□□□ 1.51
SCAPER-209ENST00000563919 MLH3Q9UHC1 1453 aa24.49■■□□□ 1.51
SCAPER-209ENST00000563919 C3P01024 1663 aa24.47■■□□□ 1.51
SCAPER-209ENST00000563919 ABCA6Q8N139 1617 aa24.46■■□□□ 1.51
SCAPER-209ENST00000563919 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
SCAPER-209ENST00000563919 AGLP35573 1532 aa24.45■■□□□ 1.5
SCAPER-209ENST00000563919 TRAPPC8Q9Y2L5 1435 aa24.44■■□□□ 1.5
SCAPER-209ENST00000563919 CDC42BPBQ9Y5S2 1711 aa24.44■■□□□ 1.5
SCAPER-209ENST00000563919 LRRIQ1Q96JM4 1722 aa24.42■■□□□ 1.5
SCAPER-209ENST00000563919 LTBP4Q8N2S1 1624 aa24.41■■□□□ 1.5
SCAPER-209ENST00000563919 ABCC1P33527 1531 aa24.39■■□□□ 1.49
SCAPER-209ENST00000563919 NCOA1Q15788 1441 aa24.38■■□□□ 1.49
SCAPER-209ENST00000563919 CNTLNQ9NXG0 1405 aa24.37■■□□□ 1.49
SCAPER-209ENST00000563919 PREX2Q70Z35 1606 aa24.36■■□□□ 1.49
SCAPER-209ENST00000563919 KIDINS220Q9ULH0 1771 aa24.35■■□□□ 1.49
SCAPER-209ENST00000563919 SPATA31D1Q6ZQQ2 1576 aa24.35■■□□□ 1.49
SCAPER-209ENST00000563919 IQSEC2Q5JU85 1478 aa24.35■■□□□ 1.49
SCAPER-209ENST00000563919 ITSN2Q9NZM3 1697 aa24.34■■□□□ 1.49
SCAPER-209ENST00000563919 NPATQ14207 1427 aa24.3■■□□□ 1.48
SCAPER-209ENST00000563919 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
SCAPER-209ENST00000563919 CCDC18Q5T9S5 1454 aa24.29■■□□□ 1.48
SCAPER-209ENST00000563919 CAMSAP1Q5T5Y3 1602 aa24.28■■□□□ 1.48
SCAPER-209ENST00000563919 ZMYM3Q14202 1370 aa24.28■■□□□ 1.48
SCAPER-209ENST00000563919 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
SCAPER-209ENST00000563919 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
SCAPER-209ENST00000563919 MROH2AA6NES4 1674 aa24.26■■□□□ 1.47
SCAPER-209ENST00000563919 NCKAP5LQ9HCH0 1330 aa24.25■■□□□ 1.47
SCAPER-209ENST00000563919 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
SCAPER-209ENST00000563919 SPAG9O60271 1321 aaKnown RBP24.23■■□□□ 1.47
SCAPER-209ENST00000563919 ZNF335Q9H4Z2 1342 aaPredicted RBP24.21■■□□□ 1.47
SCAPER-209ENST00000563919 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
SCAPER-209ENST00000563919 UBAP1LF5GYI3 381 aa24.18■■□□□ 1.46
SCAPER-209ENST00000563919 PKD2Q13563 968 aa24.18■■□□□ 1.46
SCAPER-209ENST00000563919 SYCP2Q9BX26 1530 aa24.18■■□□□ 1.46
SCAPER-209ENST00000563919 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
SCAPER-209ENST00000563919 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
SCAPER-209ENST00000563919 PLA2R1Q13018 1463 aa24.15■■□□□ 1.46
SCAPER-209ENST00000563919 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
SCAPER-209ENST00000563919 FYCO1Q9BQS8 1478 aa24.14■■□□□ 1.46
SCAPER-209ENST00000563919 PTPRKQ15262 1439 aa24.14■■□□□ 1.45
SCAPER-209ENST00000563919 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
SCAPER-209ENST00000563919 KIAA1107Q9UPP5 1409 aa24.14■■□□□ 1.45
SCAPER-209ENST00000563919 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
SCAPER-209ENST00000563919 PLXNC1O60486 1568 aa24.13■■□□□ 1.45
SCAPER-209ENST00000563919 ZNF142P52746 1687 aaPredicted RBP24.13■■□□□ 1.45
SCAPER-209ENST00000563919 ATP7AQ04656 1500 aa24.13■■□□□ 1.45
SCAPER-209ENST00000563919 A2MP01023 1474 aa24.13■■□□□ 1.45
SCAPER-209ENST00000563919 MYO3AQ8NEV4 1616 aa24.12■■□□□ 1.45
SCAPER-209ENST00000563919 GGT6Q6P531 493 aa24.11■■□□□ 1.45
SCAPER-209ENST00000563919 CEP170BQ9Y4F5 1589 aaPredicted RBP24.11■■□□□ 1.45
SCAPER-209ENST00000563919 CFDP1Q9UEE9 299 aaPredicted RBP24.1■■□□□ 1.45
SCAPER-209ENST00000563919 INO80Q9ULG1 1556 aaPredicted RBP24.09■■□□□ 1.45
SCAPER-209ENST00000563919 PLEKHH2Q8IVE3 1493 aa24.09■■□□□ 1.45
SCAPER-209ENST00000563919 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
SCAPER-209ENST00000563919 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
SCAPER-209ENST00000563919 A2ML1A8K2U0 1454 aa24.01■■□□□ 1.43
SCAPER-209ENST00000563919 ADGBQ8N7X0 1667 aa24■■□□□ 1.43
SCAPER-209ENST00000563919 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
SCAPER-209ENST00000563919 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
SCAPER-209ENST00000563919 HSPA1LP34931 641 aa23.97■■□□□ 1.43
SCAPER-209ENST00000563919 MBD5Q9P267 1494 aa23.95■■□□□ 1.42
SCAPER-209ENST00000563919 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
SCAPER-209ENST00000563919 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
SCAPER-209ENST00000563919 PIP4K2BP78356 416 aa23.94■■□□□ 1.42
SCAPER-209ENST00000563919 RTEL1-TNFRSF6BF6WH68 1400 aa23.93■■□□□ 1.42
SCAPER-209ENST00000563919 SCAF1Q9H7N4 1312 aaKnown RBP23.93■■□□□ 1.42
SCAPER-209ENST00000563919 TOM1O60784 492 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms