RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC187-201ENST00000563590 KDM5BQ9UGL1 1544 aa17.17■□□□□ 0.34
CCDC187-201ENST00000563590 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
CCDC187-201ENST00000563590 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
CCDC187-201ENST00000563590 NAIPQ13075 1403 aa17.16■□□□□ 0.34
CCDC187-201ENST00000563590 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
CCDC187-201ENST00000563590 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
CCDC187-201ENST00000563590 PRKRIP1Q9H875 184 aaPredicted RBP17.15■□□□□ 0.34
CCDC187-201ENST00000563590 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
CCDC187-201ENST00000563590 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
CCDC187-201ENST00000563590 CNTLNQ9NXG0 1405 aa17.14■□□□□ 0.33
CCDC187-201ENST00000563590 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
CCDC187-201ENST00000563590 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
CCDC187-201ENST00000563590 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
CCDC187-201ENST00000563590 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
CCDC187-201ENST00000563590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC187-201ENST00000563590 NCOA2Q15596 1464 aa17.08■□□□□ 0.33
CCDC187-201ENST00000563590 L3MBTL2Q969R5 705 aa17.07■□□□□ 0.32
CCDC187-201ENST00000563590 ARXQ96QS3 562 aa17.07■□□□□ 0.32
CCDC187-201ENST00000563590 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
CCDC187-201ENST00000563590 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
CCDC187-201ENST00000563590 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
CCDC187-201ENST00000563590 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
CCDC187-201ENST00000563590 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
CCDC187-201ENST00000563590 RGL3Q3MIN7 710 aa17.04■□□□□ 0.32
CCDC187-201ENST00000563590 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
CCDC187-201ENST00000563590 BRPF3Q9ULD4 1205 aa17.02■□□□□ 0.32
CCDC187-201ENST00000563590 NCOA1Q15788 1441 aa17.02■□□□□ 0.32
CCDC187-201ENST00000563590 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
CCDC187-201ENST00000563590 DENND4BO75064 1496 aaPredicted RBP17.01■□□□□ 0.31
CCDC187-201ENST00000563590 SLC4A3P48751 1232 aa17■□□□□ 0.31
CCDC187-201ENST00000563590 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
CCDC187-201ENST00000563590 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
CCDC187-201ENST00000563590 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
CCDC187-201ENST00000563590 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
CCDC187-201ENST00000563590 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
CCDC187-201ENST00000563590 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
CCDC187-201ENST00000563590 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
CCDC187-201ENST00000563590 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
CCDC187-201ENST00000563590 CARMIL2Q6F5E8 1435 aa16.93■□□□□ 0.3
CCDC187-201ENST00000563590 KDM6BO15054 1643 aa16.93■□□□□ 0.3
CCDC187-201ENST00000563590 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
CCDC187-201ENST00000563590 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
CCDC187-201ENST00000563590 CUL7Q14999 1698 aa16.9■□□□□ 0.3
CCDC187-201ENST00000563590 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
CCDC187-201ENST00000563590 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
CCDC187-201ENST00000563590 CTTNBP2Q8WZ74 1663 aa16.89■□□□□ 0.29
CCDC187-201ENST00000563590 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.29
CCDC187-201ENST00000563590 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
CCDC187-201ENST00000563590 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
CCDC187-201ENST00000563590 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
CCDC187-201ENST00000563590 PDE4AP27815 886 aa16.87■□□□□ 0.29
CCDC187-201ENST00000563590 EXOC6Q8TAG9 804 aa16.87■□□□□ 0.29
CCDC187-201ENST00000563590 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
CCDC187-201ENST00000563590 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
CCDC187-201ENST00000563590 WDR62O43379 1518 aa16.86■□□□□ 0.29
CCDC187-201ENST00000563590 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
CCDC187-201ENST00000563590 SPATA31E1Q6ZUB1 1445 aa16.85■□□□□ 0.29
CCDC187-201ENST00000563590 ANKRD30BQ9BXX2 1392 aa16.85■□□□□ 0.29
CCDC187-201ENST00000563590 PTPRGP23470 1445 aa16.84■□□□□ 0.29
CCDC187-201ENST00000563590 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.29
CCDC187-201ENST00000563590 DHX29Q7Z478 1369 aaKnown RBP16.83■□□□□ 0.29
CCDC187-201ENST00000563590 GCC2Q8IWJ2 1684 aa16.83■□□□□ 0.29
CCDC187-201ENST00000563590 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
CCDC187-201ENST00000563590 RPRD2Q5VT52 1461 aaKnown RBP16.82■□□□□ 0.28
CCDC187-201ENST00000563590 KIAA0586Q9BVV6 1533 aa16.82■□□□□ 0.28
CCDC187-201ENST00000563590 GSE1Q14687 1217 aa16.82■□□□□ 0.28
CCDC187-201ENST00000563590 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
CCDC187-201ENST00000563590 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
CCDC187-201ENST00000563590 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
CCDC187-201ENST00000563590 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
CCDC187-201ENST00000563590 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
CCDC187-201ENST00000563590 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
CCDC187-201ENST00000563590 PRG4Q92954 1404 aaPredicted RBP16.81■□□□□ 0.28
CCDC187-201ENST00000563590 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
CCDC187-201ENST00000563590 PLIN1O60240 522 aa16.8■□□□□ 0.28
CCDC187-201ENST00000563590 SAMD9Q5K651 1589 aa16.8■□□□□ 0.28
CCDC187-201ENST00000563590 EIF4G3O43432 1585 aaKnown RBP16.8■□□□□ 0.28
CCDC187-201ENST00000563590 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
CCDC187-201ENST00000563590 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
CCDC187-201ENST00000563590 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
CCDC187-201ENST00000563590 RGS3P49796 1198 aa16.78■□□□□ 0.28
CCDC187-201ENST00000563590 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
CCDC187-201ENST00000563590 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
CCDC187-201ENST00000563590 MAGI1Q96QZ7 1491 aaPredicted RBP16.76■□□□□ 0.27
CCDC187-201ENST00000563590 PKD2Q13563 968 aa16.76■□□□□ 0.27
CCDC187-201ENST00000563590 PLB1Q6P1J6 1458 aa16.76■□□□□ 0.27
CCDC187-201ENST00000563590 DDRGK1Q96HY6 314 aa16.76■□□□□ 0.27
CCDC187-201ENST00000563590 USP47Q96K76 1375 aa16.76■□□□□ 0.27
CCDC187-201ENST00000563590 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
CCDC187-201ENST00000563590 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
CCDC187-201ENST00000563590 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC187-201ENST00000563590 NFKBIBQ15653 356 aa16.75■□□□□ 0.27
CCDC187-201ENST00000563590 RRP1P56182 461 aaKnown RBP16.74■□□□□ 0.27
CCDC187-201ENST00000563590 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
CCDC187-201ENST00000563590 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
CCDC187-201ENST00000563590 USP35Q9P2H5 1018 aa16.74■□□□□ 0.27
CCDC187-201ENST00000563590 ARID4BQ4LE39 1312 aaPredicted RBP16.74■□□□□ 0.27
CCDC187-201ENST00000563590 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
CCDC187-201ENST00000563590 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms