RNA–Protein interactions for RNA: ENST00000562556.5

BCAR1-211, Transcript of BCAR1, Cas family scaffold protein, humanhuman

TSL 2

Gene BCAR1, Length 4,659 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1-211ENST00000562556 LAS1LQ9Y4W2 734 aaKnown RBP17.44■□□□□ 0.38
BCAR1-211ENST00000562556 LMOD2Q6P5Q4 547 aa17.44■□□□□ 0.38
BCAR1-211ENST00000562556 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
BCAR1-211ENST00000562556 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.381e-6■■■□□ 16.6
BCAR1-211ENST00000562556 TMF1P82094 1093 aa17.44■□□□□ 0.38
BCAR1-211ENST00000562556 TRIM44Q96DX7 344 aaPredicted RBP17.42■□□□□ 0.38
BCAR1-211ENST00000562556 NESP48681 1621 aa17.42■□□□□ 0.38
BCAR1-211ENST00000562556 SOX12O15370 315 aa17.41■□□□□ 0.38
BCAR1-211ENST00000562556 BECN1Q14457 450 aa17.39■□□□□ 0.38
BCAR1-211ENST00000562556 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
BCAR1-211ENST00000562556 NUTM2DQ5VT03 806 aaPredicted RBP17.39■□□□□ 0.37
BCAR1-211ENST00000562556 PTPRGP23470 1445 aa17.39■□□□□ 0.37
BCAR1-211ENST00000562556 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
BCAR1-211ENST00000562556 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
BCAR1-211ENST00000562556 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
BCAR1-211ENST00000562556 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
BCAR1-211ENST00000562556 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
BCAR1-211ENST00000562556 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
BCAR1-211ENST00000562556 NAP1L5Q96NT1 182 aaPredicted RBP17.36■□□□□ 0.37
BCAR1-211ENST00000562556 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
BCAR1-211ENST00000562556 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
BCAR1-211ENST00000562556 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
BCAR1-211ENST00000562556 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
BCAR1-211ENST00000562556 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
BCAR1-211ENST00000562556 CFTRP13569 1480 aa17.31■□□□□ 0.36
BCAR1-211ENST00000562556 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
BCAR1-211ENST00000562556 FRAT1Q92837 279 aaPredicted RBP17.3■□□□□ 0.36
BCAR1-211ENST00000562556 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
BCAR1-211ENST00000562556 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
BCAR1-211ENST00000562556 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
BCAR1-211ENST00000562556 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.35
BCAR1-211ENST00000562556 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
BCAR1-211ENST00000562556 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
BCAR1-211ENST00000562556 PHLDB1Q86UU1 1377 aa17.26■□□□□ 0.35
BCAR1-211ENST00000562556 KIF21BO75037 1637 aa17.25■□□□□ 0.35
BCAR1-211ENST00000562556 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
BCAR1-211ENST00000562556 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
BCAR1-211ENST00000562556 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
BCAR1-211ENST00000562556 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.22■□□□□ 0.35
BCAR1-211ENST00000562556 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
BCAR1-211ENST00000562556 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
BCAR1-211ENST00000562556 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
BCAR1-211ENST00000562556 GOLGA6L22H0YM25 854 aa17.2■□□□□ 0.34
BCAR1-211ENST00000562556 RGS3P49796 1198 aa17.2■□□□□ 0.34
BCAR1-211ENST00000562556 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
BCAR1-211ENST00000562556 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
BCAR1-211ENST00000562556 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
BCAR1-211ENST00000562556 CUX1P39880 1505 aa17.17■□□□□ 0.34
BCAR1-211ENST00000562556 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
BCAR1-211ENST00000562556 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
BCAR1-211ENST00000562556 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
BCAR1-211ENST00000562556 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
BCAR1-211ENST00000562556 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
BCAR1-211ENST00000562556 GRIN2BQ13224 1484 aa17.13■□□□□ 0.33
BCAR1-211ENST00000562556 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
BCAR1-211ENST00000562556 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
BCAR1-211ENST00000562556 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
BCAR1-211ENST00000562556 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
BCAR1-211ENST00000562556 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
BCAR1-211ENST00000562556 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
BCAR1-211ENST00000562556 L1TD1Q5T7N2 865 aaKnown RBP17.11■□□□□ 0.33
BCAR1-211ENST00000562556 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
BCAR1-211ENST00000562556 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
BCAR1-211ENST00000562556 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
BCAR1-211ENST00000562556 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
BCAR1-211ENST00000562556 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
BCAR1-211ENST00000562556 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
BCAR1-211ENST00000562556 RALBP1Q15311 655 aa17.08■□□□□ 0.32
BCAR1-211ENST00000562556 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.32
BCAR1-211ENST00000562556 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
BCAR1-211ENST00000562556 CCDC146Q8IYE0 955 aa17.07■□□□□ 0.32
BCAR1-211ENST00000562556 NCOA2Q15596 1464 aa17.07■□□□□ 0.32
BCAR1-211ENST00000562556 FAM69CQ0P6D2 419 aa17.06■□□□□ 0.32
BCAR1-211ENST00000562556 KIF15Q9NS87 1388 aa17.06■□□□□ 0.32
BCAR1-211ENST00000562556 PANK3Q9H999 370 aa17.06■□□□□ 0.32
BCAR1-211ENST00000562556 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
BCAR1-211ENST00000562556 TOP2BQ02880 1626 aa17.05■□□□□ 0.32
BCAR1-211ENST00000562556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
BCAR1-211ENST00000562556 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
BCAR1-211ENST00000562556 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
BCAR1-211ENST00000562556 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
BCAR1-211ENST00000562556 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
BCAR1-211ENST00000562556 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.32
BCAR1-211ENST00000562556 USP47Q96K76 1375 aa17.02■□□□□ 0.32
BCAR1-211ENST00000562556 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
BCAR1-211ENST00000562556 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
BCAR1-211ENST00000562556 EID1Q9Y6B2 187 aa17■□□□□ 0.31
BCAR1-211ENST00000562556 TERF2IPQ9NYB0 399 aa16.99■□□□□ 0.31
BCAR1-211ENST00000562556 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
BCAR1-211ENST00000562556 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
BCAR1-211ENST00000562556 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
BCAR1-211ENST00000562556 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
BCAR1-211ENST00000562556 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
BCAR1-211ENST00000562556 NGDNQ8NEJ9 315 aaKnown RBP16.98■□□□□ 0.31
BCAR1-211ENST00000562556 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
BCAR1-211ENST00000562556 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
BCAR1-211ENST00000562556 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
BCAR1-211ENST00000562556 VGFO15240 615 aaPredicted RBP16.96■□□□□ 0.31
BCAR1-211ENST00000562556 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
BCAR1-211ENST00000562556 IFT140Q96RY7 1462 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms