RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 SCAPERQ9BY12 1400 aa31.05■■■□□ 2.56
KATNB1-202ENST00000562542 ATP10AO60312 1499 aa30.99■■■□□ 2.55
KATNB1-202ENST00000562542 PREX1Q8TCU6 1659 aa30.99■■■□□ 2.55
KATNB1-202ENST00000562542 ARHGEF12Q9NZN5 1544 aa30.98■■■□□ 2.55
KATNB1-202ENST00000562542 CDK13Q14004 1512 aaKnown RBP30.98■■■□□ 2.55
KATNB1-202ENST00000562542 PLCH2O75038 1416 aa30.98■■■□□ 2.55
KATNB1-202ENST00000562542 C9orf84Q5VXU9 1444 aa30.98■■■□□ 2.55
KATNB1-202ENST00000562542 CEBPAP49715 358 aaPredicted RBP30.97■■■□□ 2.55
KATNB1-202ENST00000562542 ILDR2Q71H61 639 aa30.96■■■□□ 2.55
KATNB1-202ENST00000562542 DMRT2Q9Y5R5 561 aa30.96■■■□□ 2.55
KATNB1-202ENST00000562542 SOCS7O14512 581 aa30.91■■■□□ 2.54
KATNB1-202ENST00000562542 EEA1Q15075 1411 aa30.9■■■□□ 2.54
KATNB1-202ENST00000562542 EFCAB2Q5VUJ9 269 aa30.9■■■□□ 2.54
KATNB1-202ENST00000562542 ATP1B4Q9UN42 357 aaPredicted RBP30.9■■■□□ 2.54
KATNB1-202ENST00000562542 UHRF1BP1Q6BDS2 1440 aa30.89■■■□□ 2.53
KATNB1-202ENST00000562542 MYT1LQ9UL68 1186 aa30.87■■■□□ 2.53
KATNB1-202ENST00000562542 STRCQ7RTU9 1775 aa30.84■■■□□ 2.53
KATNB1-202ENST00000562542 MYO5CQ9NQX4 1742 aa30.84■■■□□ 2.53
KATNB1-202ENST00000562542 ZNF518AQ6AHZ1 1483 aa30.82■■■□□ 2.52
KATNB1-202ENST00000562542 CDK11AQ9UQ88 783 aaPredicted RBP30.79■■■□□ 2.52
KATNB1-202ENST00000562542 AFAP1Q8N556 730 aa30.78■■■□□ 2.52
KATNB1-202ENST00000562542 SPATA31D1Q6ZQQ2 1576 aa30.76■■■□□ 2.52
KATNB1-202ENST00000562542 ARHGAP5Q13017 1502 aa30.76■■■□□ 2.51
KATNB1-202ENST00000562542 ESF1Q9H501 851 aaKnown RBP30.74■■■□□ 2.51
KATNB1-202ENST00000562542 KIF14Q15058 1648 aa30.73■■■□□ 2.51
KATNB1-202ENST00000562542 PTPRTO14522 1441 aa30.73■■■□□ 2.51
KATNB1-202ENST00000562542 FMN1Q68DA7 1419 aa30.72■■■□□ 2.51
KATNB1-202ENST00000562542 KDM5CP41229 1560 aa30.71■■■□□ 2.51
KATNB1-202ENST00000562542 SETD1BQ9UPS6 1966 aaKnown RBP30.71■■■□□ 2.51
KATNB1-202ENST00000562542 DIP2CQ9Y2E4 1556 aa30.7■■■□□ 2.5
KATNB1-202ENST00000562542 EHMT2Q96KQ7 1210 aa30.68■■■□□ 2.5
KATNB1-202ENST00000562542 CLIP1P30622 1438 aa30.66■■■□□ 2.5
KATNB1-202ENST00000562542 C3P01024 1663 aa30.66■■■□□ 2.5
KATNB1-202ENST00000562542 TROQ12816 1431 aaPredicted RBP30.65■■■□□ 2.5
KATNB1-202ENST00000562542 REREQ9P2R6 1566 aa30.64■■■□□ 2.5
KATNB1-202ENST00000562542 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
KATNB1-202ENST00000562542 ABCA6Q8N139 1617 aa30.62■■■□□ 2.49
KATNB1-202ENST00000562542 TRAPPC8Q9Y2L5 1435 aa30.62■■■□□ 2.49
KATNB1-202ENST00000562542 MLH3Q9UHC1 1453 aa30.6■■■□□ 2.49
KATNB1-202ENST00000562542 LTBP4Q8N2S1 1624 aa30.59■■■□□ 2.49
KATNB1-202ENST00000562542 AGLP35573 1532 aa30.57■■■□□ 2.48
KATNB1-202ENST00000562542 IQSEC2Q5JU85 1478 aa30.56■■■□□ 2.48
KATNB1-202ENST00000562542 ARHGAP35Q9NRY4 1499 aa30.56■■■□□ 2.48
KATNB1-202ENST00000562542 NCOA1Q15788 1441 aa30.56■■■□□ 2.48
KATNB1-202ENST00000562542 CNTLNQ9NXG0 1405 aa30.53■■■□□ 2.48
KATNB1-202ENST00000562542 CDC42BPBQ9Y5S2 1711 aa30.52■■■□□ 2.48
KATNB1-202ENST00000562542 ABCC1P33527 1531 aa30.5■■■□□ 2.47
KATNB1-202ENST00000562542 CAMSAP1Q5T5Y3 1602 aa30.47■■■□□ 2.47
KATNB1-202ENST00000562542 PREX2Q70Z35 1606 aa30.47■■■□□ 2.47
KATNB1-202ENST00000562542 ITSN2Q9NZM3 1697 aa30.46■■■□□ 2.47
KATNB1-202ENST00000562542 LRRIQ1Q96JM4 1722 aa30.44■■■□□ 2.46
KATNB1-202ENST00000562542 UBAP1LF5GYI3 381 aa30.43■■■□□ 2.46
KATNB1-202ENST00000562542 NPATQ14207 1427 aa30.43■■■□□ 2.46
KATNB1-202ENST00000562542 KIDINS220Q9ULH0 1771 aa30.42■■■□□ 2.46
KATNB1-202ENST00000562542 NCKAP5LQ9HCH0 1330 aa30.42■■■□□ 2.46
KATNB1-202ENST00000562542 ZNF335Q9H4Z2 1342 aaPredicted RBP30.4■■■□□ 2.46
KATNB1-202ENST00000562542 ZMYM3Q14202 1370 aa30.38■■■□□ 2.45
KATNB1-202ENST00000562542 ZNF777Q9ULD5 760 aaPredicted RBP30.37■■■□□ 2.45
KATNB1-202ENST00000562542 MROH2AA6NES4 1674 aa30.36■■■□□ 2.45
KATNB1-202ENST00000562542 CCDC18Q5T9S5 1454 aa30.34■■■□□ 2.45
KATNB1-202ENST00000562542 SAMD9LQ8IVG5 1584 aa30.32■■■□□ 2.45
KATNB1-202ENST00000562542 SPAG9O60271 1321 aaKnown RBP30.31■■■□□ 2.44
KATNB1-202ENST00000562542 CDC42BPAQ5VT25 1732 aa30.3■■■□□ 2.44
KATNB1-202ENST00000562542 PKD2Q13563 968 aa30.3■■■□□ 2.44
KATNB1-202ENST00000562542 SUPT6HQ7KZ85 1726 aaKnown RBP30.29■■■□□ 2.44
KATNB1-202ENST00000562542 CASKIN1Q8WXD9 1431 aa30.28■■■□□ 2.44
KATNB1-202ENST00000562542 MYO3AQ8NEV4 1616 aa30.27■■■□□ 2.44
KATNB1-202ENST00000562542 SYCP2Q9BX26 1530 aa30.27■■■□□ 2.44
KATNB1-202ENST00000562542 CLTCQ00610 1675 aaKnown RBP30.27■■■□□ 2.44
KATNB1-202ENST00000562542 PLA2R1Q13018 1463 aa30.26■■■□□ 2.44
KATNB1-202ENST00000562542 HNRNPMP52272 730 aaKnown RBP eCLIP30.24■■■□□ 2.43
KATNB1-202ENST00000562542 CEP170BQ9Y4F5 1589 aaPredicted RBP30.24■■■□□ 2.43
KATNB1-202ENST00000562542 ZNF142P52746 1687 aaPredicted RBP30.23■■■□□ 2.43
KATNB1-202ENST00000562542 SCAF1Q9H7N4 1312 aaKnown RBP30.22■■■□□ 2.43
KATNB1-202ENST00000562542 GGT6Q6P531 493 aa30.22■■■□□ 2.43
KATNB1-202ENST00000562542 PPP6R1Q9UPN7 881 aa30.22■■■□□ 2.43
KATNB1-202ENST00000562542 ATP7AQ04656 1500 aa30.21■■■□□ 2.43
KATNB1-202ENST00000562542 PTPRKQ15262 1439 aa30.21■■■□□ 2.43
KATNB1-202ENST00000562542 TCOF1Q13428 1488 aaKnown RBP30.2■■■□□ 2.43
KATNB1-202ENST00000562542 A2MP01023 1474 aa30.19■■■□□ 2.42
KATNB1-202ENST00000562542 GPATCH8Q9UKJ3 1502 aaKnown RBP30.17■■■□□ 2.42
KATNB1-202ENST00000562542 PLXNC1O60486 1568 aa30.15■■■□□ 2.42
KATNB1-202ENST00000562542 PIP4K2BP78356 416 aa30.15■■■□□ 2.42
KATNB1-202ENST00000562542 INO80Q9ULG1 1556 aaPredicted RBP30.13■■■□□ 2.41
KATNB1-202ENST00000562542 CFDP1Q9UEE9 299 aaPredicted RBP30.13■■■□□ 2.41
KATNB1-202ENST00000562542 PLEKHH2Q8IVE3 1493 aa30.12■■■□□ 2.41
KATNB1-202ENST00000562542 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
KATNB1-202ENST00000562542 HSPA1LP34931 641 aa30.12■■■□□ 2.41
KATNB1-202ENST00000562542 KIAA1107Q9UPP5 1409 aa30.11■■■□□ 2.41
KATNB1-202ENST00000562542 MED1Q15648 1581 aaPredicted RBP30.08■■■□□ 2.41
KATNB1-202ENST00000562542 TOM1O60784 492 aa30.08■■■□□ 2.41
KATNB1-202ENST00000562542 A2ML1A8K2U0 1454 aa30.07■■■□□ 2.4
KATNB1-202ENST00000562542 CCNB3Q8WWL7 1395 aa30.07■■■□□ 2.4
KATNB1-202ENST00000562542 DNMT1P26358 1616 aaKnown RBP30.04■■■□□ 2.4
KATNB1-202ENST00000562542 CPS1P31327 1500 aa30.01■■■□□ 2.4
KATNB1-202ENST00000562542 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.4
KATNB1-202ENST00000562542 PHF23Q9BUL5 403 aaPredicted RBP29.99■■■□□ 2.39
KATNB1-202ENST00000562542 SHANK2Q9UPX8 1470 aa29.99■■■□□ 2.39
KATNB1-202ENST00000562542 POLR1AO95602 1720 aaPredicted RBP29.97■■■□□ 2.39
KATNB1-202ENST00000562542 TNRQ92752 1358 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms