RNA–Protein interactions for RNA: ENST00000560980.5

LRRC49-226, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-226ENST00000560980 TRPC6Q9Y210 931 aa10.75□□□□□ -0.69
LRRC49-226ENST00000560980 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
LRRC49-226ENST00000560980 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
LRRC49-226ENST00000560980 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
LRRC49-226ENST00000560980 CUX1P39880 1505 aa10.73□□□□□ -0.69
LRRC49-226ENST00000560980 NESP48681 1621 aa10.73□□□□□ -0.69
LRRC49-226ENST00000560980 NKX1-1Q15270 411 aaPredicted RBP10.72□□□□□ -0.69
LRRC49-226ENST00000560980 BMP2KQ9NSY1 1161 aaPredicted RBP10.72□□□□□ -0.69
LRRC49-226ENST00000560980 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
LRRC49-226ENST00000560980 EEA1Q15075 1411 aa10.71□□□□□ -0.69
LRRC49-226ENST00000560980 PDS5BQ9NTI5 1447 aa10.71□□□□□ -0.69
LRRC49-226ENST00000560980 POTEJP0CG39 1038 aa10.71□□□□□ -0.69
LRRC49-226ENST00000560980 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
LRRC49-226ENST00000560980 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
LRRC49-226ENST00000560980 TIE1P35590 1138 aa10.69□□□□□ -0.7
LRRC49-226ENST00000560980 VSIG10Q8N0Z9 540 aa10.69□□□□□ -0.7
LRRC49-226ENST00000560980 TMEM106CQ9BVX2 250 aa10.69□□□□□ -0.7
LRRC49-226ENST00000560980 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
LRRC49-226ENST00000560980 RYDENQ9NUL5 291 aaKnown RBP10.68□□□□□ -0.7
LRRC49-226ENST00000560980 POTEFA5A3E0 1075 aa10.66□□□□□ -0.7
LRRC49-226ENST00000560980 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
LRRC49-226ENST00000560980 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
LRRC49-226ENST00000560980 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
LRRC49-226ENST00000560980 GTPBP6O43824 516 aaPredicted RBP10.64□□□□□ -0.71
LRRC49-226ENST00000560980 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
LRRC49-226ENST00000560980 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
LRRC49-226ENST00000560980 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
LRRC49-226ENST00000560980 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
LRRC49-226ENST00000560980 KIF21BO75037 1637 aa10.61□□□□□ -0.71
LRRC49-226ENST00000560980 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
LRRC49-226ENST00000560980 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
LRRC49-226ENST00000560980 SOGA1O94964 1423 aa10.6□□□□□ -0.71
LRRC49-226ENST00000560980 MRC2Q9UBG0 1479 aa10.59□□□□□ -0.71
LRRC49-226ENST00000560980 SOX12O15370 315 aa10.58□□□□□ -0.72
LRRC49-226ENST00000560980 MAMSTRQ6ZN01 415 aa10.58□□□□□ -0.72
LRRC49-226ENST00000560980 NLRP6P59044 892 aa10.58□□□□□ -0.72
LRRC49-226ENST00000560980 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
LRRC49-226ENST00000560980 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
LRRC49-226ENST00000560980 WDR62O43379 1518 aa10.57□□□□□ -0.72
LRRC49-226ENST00000560980 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
LRRC49-226ENST00000560980 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
LRRC49-226ENST00000560980 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
LRRC49-226ENST00000560980 COLQQ9Y215 455 aaPredicted RBP10.57□□□□□ -0.72
LRRC49-226ENST00000560980 RUSC2Q8N2Y8 1516 aa10.56□□□□□ -0.72
LRRC49-226ENST00000560980 ABCA10Q8WWZ4 1543 aa10.56□□□□□ -0.72
LRRC49-226ENST00000560980 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
LRRC49-226ENST00000560980 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
LRRC49-226ENST00000560980 IER5LQ5T953 404 aa10.54□□□□□ -0.72
LRRC49-226ENST00000560980 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
LRRC49-226ENST00000560980 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.72
LRRC49-226ENST00000560980 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.73
LRRC49-226ENST00000560980 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
LRRC49-226ENST00000560980 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
LRRC49-226ENST00000560980 CUL7Q14999 1698 aa10.51□□□□□ -0.73
LRRC49-226ENST00000560980 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
LRRC49-226ENST00000560980 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
LRRC49-226ENST00000560980 SCUBE2Q9NQ36 999 aa10.5□□□□□ -0.73
LRRC49-226ENST00000560980 CUX2O14529 1486 aa10.5□□□□□ -0.73
LRRC49-226ENST00000560980 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
LRRC49-226ENST00000560980 BCANQ96GW7 911 aa10.5□□□□□ -0.73
LRRC49-226ENST00000560980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.73
LRRC49-226ENST00000560980 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
LRRC49-226ENST00000560980 SEC24BO95487 1268 aa10.49□□□□□ -0.73
LRRC49-226ENST00000560980 PBRM1Q86U86 1689 aa10.48□□□□□ -0.73
LRRC49-226ENST00000560980 LOC105371045A0A1W2PR82 267 aa10.48□□□□□ -0.73
LRRC49-226ENST00000560980 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
LRRC49-226ENST00000560980 RAD54L2Q9Y4B4 1467 aa10.47□□□□□ -0.73
LRRC49-226ENST00000560980 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
LRRC49-226ENST00000560980 PPP1R37O75864 691 aa10.45□□□□□ -0.74
LRRC49-226ENST00000560980 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
LRRC49-226ENST00000560980 MS4A4AQ96JQ5 239 aa10.44□□□□□ -0.74
LRRC49-226ENST00000560980 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
LRRC49-226ENST00000560980 IGF1RP08069 1367 aa10.42□□□□□ -0.74
LRRC49-226ENST00000560980 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
LRRC49-226ENST00000560980 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
LRRC49-226ENST00000560980 CTTNBP2Q8WZ74 1663 aa10.41□□□□□ -0.74
LRRC49-226ENST00000560980 PLCG2P16885 1265 aa10.4□□□□□ -0.75
LRRC49-226ENST00000560980 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
LRRC49-226ENST00000560980 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
LRRC49-226ENST00000560980 ADAMTS12P58397 1594 aa10.37□□□□□ -0.75
LRRC49-226ENST00000560980 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
LRRC49-226ENST00000560980 MMRN1Q13201 1228 aa10.37□□□□□ -0.75
LRRC49-226ENST00000560980 ILDR1Q86SU0 546 aaPredicted RBP10.37□□□□□ -0.75
LRRC49-226ENST00000560980 CEP162Q5TB80 1403 aa10.37□□□□□ -0.75
LRRC49-226ENST00000560980 G3V3G9 751 aa10.36□□□□□ -0.75
LRRC49-226ENST00000560980 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
LRRC49-226ENST00000560980 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
LRRC49-226ENST00000560980 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
LRRC49-226ENST00000560980 PDCD7Q8N8D1 485 aaKnown RBP10.35□□□□□ -0.75
LRRC49-226ENST00000560980 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
LRRC49-226ENST00000560980 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
LRRC49-226ENST00000560980 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
LRRC49-226ENST00000560980 ZNF608Q9ULD9 1512 aaPredicted RBP10.32□□□□□ -0.76
LRRC49-226ENST00000560980 FHAD1B1AJZ9 1412 aa10.31□□□□□ -0.76
LRRC49-226ENST00000560980 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
LRRC49-226ENST00000560980 AQRO60306 1485 aaKnown RBP eCLIP10.3□□□□□ -0.76
LRRC49-226ENST00000560980 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
LRRC49-226ENST00000560980 CLIP1P30622 1438 aa10.3□□□□□ -0.76
LRRC49-226ENST00000560980 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
LRRC49-226ENST00000560980 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms