RNA–Protein interactions for RNA: ENST00000560980.5

LRRC49-226, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,443 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-226ENST00000560980 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
LRRC49-226ENST00000560980 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
LRRC49-226ENST00000560980 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
LRRC49-226ENST00000560980 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
LRRC49-226ENST00000560980 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
LRRC49-226ENST00000560980 FOXD1Q16676 465 aa17.72■□□□□ 0.43
LRRC49-226ENST00000560980 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
LRRC49-226ENST00000560980 MSH5O43196 834 aa16.64■□□□□ 0.25
LRRC49-226ENST00000560980 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
LRRC49-226ENST00000560980 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
LRRC49-226ENST00000560980 ADRA2BP18089 450 aa16.47■□□□□ 0.23
LRRC49-226ENST00000560980 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
LRRC49-226ENST00000560980 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
LRRC49-226ENST00000560980 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
LRRC49-226ENST00000560980 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
LRRC49-226ENST00000560980 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
LRRC49-226ENST00000560980 KCNA4P22459 653 aa14.92□□□□□ -0.02
LRRC49-226ENST00000560980 NISCHQ9Y2I1 1504 aa14.89□□□□□ -0.03
LRRC49-226ENST00000560980 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
LRRC49-226ENST00000560980 CNKSR2Q8WXI2 1034 aa14.6□□□□□ -0.07
LRRC49-226ENST00000560980 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
LRRC49-226ENST00000560980 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
LRRC49-226ENST00000560980 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
LRRC49-226ENST00000560980 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
LRRC49-226ENST00000560980 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
LRRC49-226ENST00000560980 POTEHQ6S545 545 aa14.24□□□□□ -0.13
LRRC49-226ENST00000560980 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
LRRC49-226ENST00000560980 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
LRRC49-226ENST00000560980 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
LRRC49-226ENST00000560980 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
LRRC49-226ENST00000560980 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
LRRC49-226ENST00000560980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
LRRC49-226ENST00000560980 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
LRRC49-226ENST00000560980 ZBTB22O15209 634 aa13.69□□□□□ -0.22
LRRC49-226ENST00000560980 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
LRRC49-226ENST00000560980 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
LRRC49-226ENST00000560980 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
LRRC49-226ENST00000560980 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
LRRC49-226ENST00000560980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
LRRC49-226ENST00000560980 CAPN15O75808 1086 aa13.24□□□□□ -0.29
LRRC49-226ENST00000560980 DSG3P32926 999 aa13.24□□□□□ -0.29
LRRC49-226ENST00000560980 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
LRRC49-226ENST00000560980 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
LRRC49-226ENST00000560980 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
LRRC49-226ENST00000560980 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
LRRC49-226ENST00000560980 APLP2Q06481 763 aa13.08□□□□□ -0.32
LRRC49-226ENST00000560980 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
LRRC49-226ENST00000560980 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
LRRC49-226ENST00000560980 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
LRRC49-226ENST00000560980 ABCB7O75027 752 aa12.95□□□□□ -0.34
LRRC49-226ENST00000560980 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
LRRC49-226ENST00000560980 POLA2Q14181 598 aa12.71□□□□□ -0.38
LRRC49-226ENST00000560980 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
LRRC49-226ENST00000560980 FBLN2P98095 1184 aa12.53□□□□□ -0.4
LRRC49-226ENST00000560980 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.4
LRRC49-226ENST00000560980 FKBP8Q14318 412 aa12.52□□□□□ -0.41
LRRC49-226ENST00000560980 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
LRRC49-226ENST00000560980 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
LRRC49-226ENST00000560980 DCAF1Q9Y4B6 1507 aa12.42□□□□□ -0.42
LRRC49-226ENST00000560980 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
LRRC49-226ENST00000560980 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
LRRC49-226ENST00000560980 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
LRRC49-226ENST00000560980 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
LRRC49-226ENST00000560980 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
LRRC49-226ENST00000560980 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
LRRC49-226ENST00000560980 ABCC9O60706 1549 aa12.22□□□□□ -0.45
LRRC49-226ENST00000560980 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
LRRC49-226ENST00000560980 NACADO15069 1562 aa12.19□□□□□ -0.46
LRRC49-226ENST00000560980 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
LRRC49-226ENST00000560980 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
LRRC49-226ENST00000560980 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
LRRC49-226ENST00000560980 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
LRRC49-226ENST00000560980 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
LRRC49-226ENST00000560980 RB1CC1Q8TDY2 1594 aa12.07□□□□□ -0.48
LRRC49-226ENST00000560980 DCAF8L2P0C7V8 631 aa12.05□□□□□ -0.48
LRRC49-226ENST00000560980 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
LRRC49-226ENST00000560980 PROM2Q8N271 834 aa12.04□□□□□ -0.48
LRRC49-226ENST00000560980 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
LRRC49-226ENST00000560980 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
LRRC49-226ENST00000560980 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
LRRC49-226ENST00000560980 HAX1O00165 279 aa11.98□□□□□ -0.49
LRRC49-226ENST00000560980 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
LRRC49-226ENST00000560980 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.49
LRRC49-226ENST00000560980 UNC13AQ9UPW8 1703 aa11.92□□□□□ -0.5
LRRC49-226ENST00000560980 AMER1Q5JTC6 1135 aaPredicted RBP11.92□□□□□ -0.5
LRRC49-226ENST00000560980 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
LRRC49-226ENST00000560980 LHX8Q68G74 356 aa11.9□□□□□ -0.5
LRRC49-226ENST00000560980 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
LRRC49-226ENST00000560980 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
LRRC49-226ENST00000560980 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
LRRC49-226ENST00000560980 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
LRRC49-226ENST00000560980 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
LRRC49-226ENST00000560980 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
LRRC49-226ENST00000560980 EVX2Q03828 476 aa11.72□□□□□ -0.53
LRRC49-226ENST00000560980 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
LRRC49-226ENST00000560980 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
LRRC49-226ENST00000560980 MIER1Q8N108 512 aa11.69□□□□□ -0.54
LRRC49-226ENST00000560980 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
LRRC49-226ENST00000560980 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
LRRC49-226ENST00000560980 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms