RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 LAS1LQ9Y4W2 734 aaKnown RBP8.98□□□□□ -0.97
AP4E1-203ENST00000560508 DHX57Q6P158 1386 aaKnown RBP8.98□□□□□ -0.97
AP4E1-203ENST00000560508 RALBP1Q15311 655 aa8.98□□□□□ -0.97
AP4E1-203ENST00000560508 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
AP4E1-203ENST00000560508 UNC13AQ9UPW8 1703 aa8.97□□□□□ -0.97
AP4E1-203ENST00000560508 TNNT2P45379 298 aaPredicted RBP8.97□□□□□ -0.97
AP4E1-203ENST00000560508 RAD54L2Q9Y4B4 1467 aa8.97□□□□□ -0.97
AP4E1-203ENST00000560508 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.97
AP4E1-203ENST00000560508 NEUROD2Q15784 382 aa8.96□□□□□ -0.97
AP4E1-203ENST00000560508 MORC1Q86VD1 984 aa8.96□□□□□ -0.97
AP4E1-203ENST00000560508 CC2D2AQ9P2K1 1620 aa8.96□□□□□ -0.98
AP4E1-203ENST00000560508 EFCAB5A4FU69 1503 aa8.96□□□□□ -0.98
AP4E1-203ENST00000560508 U2SURPO15042 1029 aaKnown RBP8.95□□□□□ -0.98
AP4E1-203ENST00000560508 HNRNPMP52272 730 aaKnown RBP eCLIP8.95□□□□□ -0.98
AP4E1-203ENST00000560508 SRPK2P78362 688 aaKnown RBP8.95□□□□□ -0.98
AP4E1-203ENST00000560508 FYCO1Q9BQS8 1478 aa8.95□□□□□ -0.98
AP4E1-203ENST00000560508 NCLP19338 710 aaKnown RBP8.95□□□□□ -0.98
AP4E1-203ENST00000560508 GOLGA6L22H0YM25 854 aa8.95□□□□□ -0.98
AP4E1-203ENST00000560508 LRRC9Q6ZRR7 1453 aa8.95□□□□□ -0.98
AP4E1-203ENST00000560508 IGF1RP08069 1367 aa8.94□□□□□ -0.98
AP4E1-203ENST00000560508 ERICH6BQ5W0A0 696 aa8.94□□□□□ -0.98
AP4E1-203ENST00000560508 FRAT1Q92837 279 aaPredicted RBP8.94□□□□□ -0.98
AP4E1-203ENST00000560508 HAP1P54257 671 aaPredicted RBP8.94□□□□□ -0.98
AP4E1-203ENST00000560508 JPH4Q96JJ6 628 aa8.94□□□□□ -0.98
AP4E1-203ENST00000560508 UACAQ9BZF9 1416 aa8.94□□□□□ -0.98
AP4E1-203ENST00000560508 HDGFL2Q7Z4V5 671 aaPredicted RBP8.94□□□□□ -0.98
AP4E1-203ENST00000560508 PLEKHG5O94827 1062 aa8.93□□□□□ -0.98
AP4E1-203ENST00000560508 HECW1Q76N89 1606 aa8.93□□□□□ -0.98
AP4E1-203ENST00000560508 CASKIN1Q8WXD9 1431 aa8.93□□□□□ -0.98
AP4E1-203ENST00000560508 CFTRP13569 1480 aa8.93□□□□□ -0.98
AP4E1-203ENST00000560508 SUPT6HQ7KZ85 1726 aaKnown RBP8.92□□□□□ -0.98
AP4E1-203ENST00000560508 GGT6Q6P531 493 aa8.92□□□□□ -0.98
AP4E1-203ENST00000560508 SPAG9O60271 1321 aaKnown RBP8.92□□□□□ -0.98
AP4E1-203ENST00000560508 ARXQ96QS3 562 aa8.92□□□□□ -0.98
AP4E1-203ENST00000560508 NOP58Q9Y2X3 529 aaKnown RBP8.92□□□□□ -0.98
AP4E1-203ENST00000560508 KIF15Q9NS87 1388 aa8.92□□□□□ -0.98
AP4E1-203ENST00000560508 EHBP1L1Q8N3D4 1523 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 CCDC144AA2RUR9 1427 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 MYOM3Q5VTT5 1437 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 FGD6Q6ZV73 1430 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 PHLDB1Q86UU1 1377 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 A0A0G2JS52 829 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 L3MBTL2Q969R5 705 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 DNMBPQ6XZF7 1577 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 CUL7Q14999 1698 aa8.91□□□□□ -0.98
AP4E1-203ENST00000560508 PTPRGP23470 1445 aa8.9□□□□□ -0.99
AP4E1-203ENST00000560508 MLECQ14165 292 aa8.9□□□□□ -0.99
AP4E1-203ENST00000560508 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
AP4E1-203ENST00000560508 ARAP1Q96P48 1450 aa8.89□□□□□ -0.99
AP4E1-203ENST00000560508 RGS3P49796 1198 aa8.89□□□□□ -0.99
AP4E1-203ENST00000560508 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
AP4E1-203ENST00000560508 CALD1Q05682 793 aaKnown RBP8.88□□□□□ -0.99
AP4E1-203ENST00000560508 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
AP4E1-203ENST00000560508 STK26Q9P289 416 aa8.88□□□□□ -0.99
AP4E1-203ENST00000560508 KIF3BO15066 747 aa8.88□□□□□ -0.99
AP4E1-203ENST00000560508 TRIM44Q96DX7 344 aaPredicted RBP8.88□□□□□ -0.99
AP4E1-203ENST00000560508 RCAN3Q9UKA8 241 aa8.88□□□□□ -0.99
AP4E1-203ENST00000560508 NCOA2Q15596 1464 aa8.87□□□□□ -0.99
AP4E1-203ENST00000560508 SAFB2Q14151 953 aaKnown RBP eCLIP8.87□□□□□ -0.99
AP4E1-203ENST00000560508 TIAM1Q13009 1591 aa8.87□□□□□ -0.99
AP4E1-203ENST00000560508 HSP90AB1P08238 724 aaKnown RBP8.87□□□□□ -0.99
AP4E1-203ENST00000560508 LMOD2Q6P5Q4 547 aa8.86□□□□□ -0.99
AP4E1-203ENST00000560508 RTF1Q92541 710 aaKnown RBP8.86□□□□□ -0.99
AP4E1-203ENST00000560508 TOPBP1Q92547 1522 aa8.86□□□□□ -0.99
AP4E1-203ENST00000560508 IPO8O15397 1037 aaKnown RBP8.86□□□□□ -0.99
AP4E1-203ENST00000560508 GLIPR1L2Q4G1C9 344 aa8.86□□□□□ -0.99
AP4E1-203ENST00000560508 MYBBP1AQ9BQG0 1328 aaKnown RBP8.85□□□□□ -0.99
AP4E1-203ENST00000560508 OS9Q13438 667 aaPredicted RBP8.85□□□□□ -0.99
AP4E1-203ENST00000560508 RRBP1Q9P2E9 1410 aaKnown RBP8.85□□□□□ -0.99
AP4E1-203ENST00000560508 IFT140Q96RY7 1462 aa8.85□□□□□ -0.99
AP4E1-203ENST00000560508 BIVM-ERCC5R4GMW8 1640 aa8.85□□□□□ -0.99
AP4E1-203ENST00000560508 BICRAQ9NZM4 1560 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 WASHC2CQ9Y4E1 1318 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 AQRO60306 1485 aaKnown RBP eCLIP8.84□□□□□ -0.99
AP4E1-203ENST00000560508 ARHGAP5Q13017 1502 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 PEG3Q9GZU2 1588 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 HSCBQ8IWL3 235 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 USP47Q96K76 1375 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 PDE3BQ13370 1112 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 TERF2IPQ9NYB0 399 aa8.84□□□□□ -0.99
AP4E1-203ENST00000560508 LAMC3Q9Y6N6 1575 aa8.84□□□□□ -1
AP4E1-203ENST00000560508 TRHP20396 242 aaPredicted RBP8.83□□□□□ -1
AP4E1-203ENST00000560508 NLRP13Q86W25 1043 aa8.83□□□□□ -1
AP4E1-203ENST00000560508 PRXQ9BXM0 1461 aa8.83□□□□□ -1
AP4E1-203ENST00000560508 MCCP23508 829 aa8.82□□□□□ -1
AP4E1-203ENST00000560508 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
AP4E1-203ENST00000560508 U2AF1L5P0DN76 240 aaPredicted RBP8.82□□□□□ -1
AP4E1-203ENST00000560508 U2AF1Q01081 240 aaKnown RBP eCLIP8.82□□□□□ -1
AP4E1-203ENST00000560508 TCERG1O14776 1098 aaKnown RBP8.82□□□□□ -1
AP4E1-203ENST00000560508 SYNJ2O15056 1496 aa8.81□□□□□ -1
AP4E1-203ENST00000560508 ZRSR1Q15695 479 aaKnown RBP8.81□□□□□ -1
AP4E1-203ENST00000560508 NESP48681 1621 aa8.81□□□□□ -1
AP4E1-203ENST00000560508 RWDD1Q9H446 243 aaPredicted RBP8.81□□□□□ -1
AP4E1-203ENST00000560508 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
AP4E1-203ENST00000560508 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
AP4E1-203ENST00000560508 GOLGA2Q08379 1002 aa8.81□□□□□ -1
AP4E1-203ENST00000560508 POLA1P09884 1462 aaPredicted RBP8.8□□□□□ -1
AP4E1-203ENST00000560508 SOX12O15370 315 aa8.8□□□□□ -1
AP4E1-203ENST00000560508 EID1Q9Y6B2 187 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms