RNA–Protein interactions for RNA: ENST00000559338.1

MEIS3-205, Transcript of Meis homeobox 3, humanhuman

TSL 5

Gene MEIS3, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-205ENST00000559338 ZFYVE16Q7Z3T8 1539 aa20.77■□□□□ 0.92
MEIS3-205ENST00000559338 SCAPERQ9BY12 1400 aa20.75■□□□□ 0.91
MEIS3-205ENST00000559338 TTC37Q6PGP7 1564 aa20.75■□□□□ 0.91
MEIS3-205ENST00000559338 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
MEIS3-205ENST00000559338 ATP10AO60312 1499 aa20.73■□□□□ 0.91
MEIS3-205ENST00000559338 ARHGEF12Q9NZN5 1544 aa20.73■□□□□ 0.91
MEIS3-205ENST00000559338 PLCH2O75038 1416 aa20.72■□□□□ 0.91
MEIS3-205ENST00000559338 CDK13Q14004 1512 aaKnown RBP20.71■□□□□ 0.91
MEIS3-205ENST00000559338 HECW1Q76N89 1606 aa20.7■□□□□ 0.9
MEIS3-205ENST00000559338 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
MEIS3-205ENST00000559338 PTPRTO14522 1441 aa20.67■□□□□ 0.9
MEIS3-205ENST00000559338 C9orf84Q5VXU9 1444 aa20.67■□□□□ 0.9
MEIS3-205ENST00000559338 CFAP74Q9C0B2 1584 aa20.64■□□□□ 0.9
MEIS3-205ENST00000559338 UHRF1BP1Q6BDS2 1440 aa20.64■□□□□ 0.89
MEIS3-205ENST00000559338 AFAP1Q8N556 730 aa20.64■□□□□ 0.89
MEIS3-205ENST00000559338 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
MEIS3-205ENST00000559338 STRCQ7RTU9 1775 aa20.61■□□□□ 0.89
MEIS3-205ENST00000559338 FER1L4A9Z1Z3 1794 aa20.58■□□□□ 0.89
MEIS3-205ENST00000559338 LTBP4Q8N2S1 1624 aa20.57■□□□□ 0.88
MEIS3-205ENST00000559338 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
MEIS3-205ENST00000559338 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
MEIS3-205ENST00000559338 SPATA31D1Q6ZQQ2 1576 aa20.55■□□□□ 0.88
MEIS3-205ENST00000559338 TRAPPC8Q9Y2L5 1435 aa20.54■□□□□ 0.88
MEIS3-205ENST00000559338 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
MEIS3-205ENST00000559338 SETD1BQ9UPS6 1966 aaKnown RBP20.53■□□□□ 0.88
MEIS3-205ENST00000559338 ZNF518AQ6AHZ1 1483 aa20.52■□□□□ 0.88
MEIS3-205ENST00000559338 UBTFP17480 764 aaKnown RBP20.51■□□□□ 0.87
MEIS3-205ENST00000559338 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
MEIS3-205ENST00000559338 KIF14Q15058 1648 aa20.5■□□□□ 0.87
MEIS3-205ENST00000559338 CDK11AQ9UQ88 783 aaPredicted RBP20.5■□□□□ 0.87
MEIS3-205ENST00000559338 NCOA1Q15788 1441 aa20.5■□□□□ 0.87
MEIS3-205ENST00000559338 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
MEIS3-205ENST00000559338 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
MEIS3-205ENST00000559338 MLH3Q9UHC1 1453 aa20.47■□□□□ 0.87
MEIS3-205ENST00000559338 KDM5CP41229 1560 aa20.46■□□□□ 0.87
MEIS3-205ENST00000559338 TROQ12816 1431 aaPredicted RBP20.45■□□□□ 0.86
MEIS3-205ENST00000559338 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
MEIS3-205ENST00000559338 UBAP1LF5GYI3 381 aa20.44■□□□□ 0.86
MEIS3-205ENST00000559338 AGLP35573 1532 aa20.43■□□□□ 0.86
MEIS3-205ENST00000559338 REREQ9P2R6 1566 aa20.43■□□□□ 0.86
MEIS3-205ENST00000559338 DIP2CQ9Y2E4 1556 aa20.43■□□□□ 0.86
MEIS3-205ENST00000559338 ZNF335Q9H4Z2 1342 aaPredicted RBP20.43■□□□□ 0.86
MEIS3-205ENST00000559338 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
MEIS3-205ENST00000559338 ARHGAP5Q13017 1502 aa20.43■□□□□ 0.86
MEIS3-205ENST00000559338 CNTLNQ9NXG0 1405 aa20.4■□□□□ 0.86
MEIS3-205ENST00000559338 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.86
MEIS3-205ENST00000559338 NPATQ14207 1427 aa20.38■□□□□ 0.85
MEIS3-205ENST00000559338 ZMYM3Q14202 1370 aa20.38■□□□□ 0.85
MEIS3-205ENST00000559338 ABCA6Q8N139 1617 aa20.38■□□□□ 0.85
MEIS3-205ENST00000559338 PKD2Q13563 968 aa20.36■□□□□ 0.85
MEIS3-205ENST00000559338 C3P01024 1663 aa20.35■□□□□ 0.85
MEIS3-205ENST00000559338 CLIP1P30622 1438 aa20.34■□□□□ 0.85
MEIS3-205ENST00000559338 CAMSAP1Q5T5Y3 1602 aa20.32■□□□□ 0.84
MEIS3-205ENST00000559338 LRRIQ1Q96JM4 1722 aa20.32■□□□□ 0.84
MEIS3-205ENST00000559338 ABCC1P33527 1531 aa20.32■□□□□ 0.84
MEIS3-205ENST00000559338 HSPA1LP34931 641 aa20.3■□□□□ 0.84
MEIS3-205ENST00000559338 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
MEIS3-205ENST00000559338 PLA2R1Q13018 1463 aa20.27■□□□□ 0.84
MEIS3-205ENST00000559338 TCOF1Q13428 1488 aaKnown RBP20.27■□□□□ 0.84
MEIS3-205ENST00000559338 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
MEIS3-205ENST00000559338 CASKIN1Q8WXD9 1431 aa20.25■□□□□ 0.83
MEIS3-205ENST00000559338 PREX2Q70Z35 1606 aa20.24■□□□□ 0.83
MEIS3-205ENST00000559338 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
MEIS3-205ENST00000559338 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
MEIS3-205ENST00000559338 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
MEIS3-205ENST00000559338 HNRNPMP52272 730 aaKnown RBP eCLIP20.23■□□□□ 0.83
MEIS3-205ENST00000559338 SPAG9O60271 1321 aaKnown RBP20.22■□□□□ 0.83
MEIS3-205ENST00000559338 TOM1O60784 492 aa20.21■□□□□ 0.83
MEIS3-205ENST00000559338 ITSN2Q9NZM3 1697 aa20.21■□□□□ 0.83
MEIS3-205ENST00000559338 SAMD9LQ8IVG5 1584 aa20.21■□□□□ 0.83
MEIS3-205ENST00000559338 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
MEIS3-205ENST00000559338 PIP4K2BP78356 416 aa20.2■□□□□ 0.82
MEIS3-205ENST00000559338 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
MEIS3-205ENST00000559338 GGT6Q6P531 493 aa20.18■□□□□ 0.82
MEIS3-205ENST00000559338 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
MEIS3-205ENST00000559338 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
MEIS3-205ENST00000559338 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
MEIS3-205ENST00000559338 CDC42BPAQ5VT25 1732 aa20.14■□□□□ 0.81
MEIS3-205ENST00000559338 MED1Q15648 1581 aaPredicted RBP20.13■□□□□ 0.81
MEIS3-205ENST00000559338 KIAA1107Q9UPP5 1409 aa20.13■□□□□ 0.81
MEIS3-205ENST00000559338 MROH2AA6NES4 1674 aa20.13■□□□□ 0.81
MEIS3-205ENST00000559338 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
MEIS3-205ENST00000559338 A2MP01023 1474 aa20.11■□□□□ 0.81
MEIS3-205ENST00000559338 ZNF644Q9H582 1327 aaPredicted RBP20.11■□□□□ 0.81
MEIS3-205ENST00000559338 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
MEIS3-205ENST00000559338 PLXNC1O60486 1568 aa20.09■□□□□ 0.81
MEIS3-205ENST00000559338 ATP7AQ04656 1500 aa20.09■□□□□ 0.81
MEIS3-205ENST00000559338 CFDP1Q9UEE9 299 aaPredicted RBP20.09■□□□□ 0.81
MEIS3-205ENST00000559338 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
MEIS3-205ENST00000559338 FYCO1Q9BQS8 1478 aa20.09■□□□□ 0.81
MEIS3-205ENST00000559338 SHANK2Q9UPX8 1470 aa20.09■□□□□ 0.81
MEIS3-205ENST00000559338 FBXO31Q5XUX0 539 aaPredicted RBP20.08■□□□□ 0.81
MEIS3-205ENST00000559338 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
MEIS3-205ENST00000559338 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
MEIS3-205ENST00000559338 CPS1P31327 1500 aa20.07■□□□□ 0.8
MEIS3-205ENST00000559338 MYO3AQ8NEV4 1616 aa20.06■□□□□ 0.8
MEIS3-205ENST00000559338 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
MEIS3-205ENST00000559338 ZNF142P52746 1687 aaPredicted RBP20.06■□□□□ 0.8
MEIS3-205ENST00000559338 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
MEIS3-205ENST00000559338 CLTCQ00610 1675 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms