RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
HMG20A-208ENST00000559099 GOLGA3Q08378 1498 aa13.96□□□□□ -0.17
HMG20A-208ENST00000559099 PHF23Q9BUL5 403 aaPredicted RBP13.96□□□□□ -0.17
HMG20A-208ENST00000559099 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
HMG20A-208ENST00000559099 CTTNBP2Q8WZ74 1663 aa13.95□□□□□ -0.18
HMG20A-208ENST00000559099 C3P01024 1663 aa13.94□□□□□ -0.18
HMG20A-208ENST00000559099 CFAP74Q9C0B2 1584 aa13.93□□□□□ -0.18
HMG20A-208ENST00000559099 SRCAPQ6ZRS2 3230 aa13.92□□□□□ -0.18
HMG20A-208ENST00000559099 C9orf84Q5VXU9 1444 aa13.9□□□□□ -0.18
HMG20A-208ENST00000559099 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.18
HMG20A-208ENST00000559099 ATP10AO60312 1499 aa13.9□□□□□ -0.18
HMG20A-208ENST00000559099 PIP4K2BP78356 416 aa13.87□□□□□ -0.19
HMG20A-208ENST00000559099 RGS17Q9UGC6 210 aaPredicted RBP13.87□□□□□ -0.19
HMG20A-208ENST00000559099 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
HMG20A-208ENST00000559099 TRAPPC8Q9Y2L5 1435 aa13.86□□□□□ -0.19
HMG20A-208ENST00000559099 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
HMG20A-208ENST00000559099 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
HMG20A-208ENST00000559099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.84□□□□□ -0.19
HMG20A-208ENST00000559099 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
HMG20A-208ENST00000559099 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
HMG20A-208ENST00000559099 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
HMG20A-208ENST00000559099 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
HMG20A-208ENST00000559099 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
HMG20A-208ENST00000559099 TOM1O60784 492 aa13.78□□□□□ -0.2
HMG20A-208ENST00000559099 SETD1AO15047 1707 aaKnown RBP13.77□□□□□ -0.21
HMG20A-208ENST00000559099 PLA2R1Q13018 1463 aa13.77□□□□□ -0.21
HMG20A-208ENST00000559099 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
HMG20A-208ENST00000559099 ZNF142P52746 1687 aaPredicted RBP13.76□□□□□ -0.21
HMG20A-208ENST00000559099 DIP2CQ9Y2E4 1556 aa13.76□□□□□ -0.21
HMG20A-208ENST00000559099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
HMG20A-208ENST00000559099 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
HMG20A-208ENST00000559099 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
HMG20A-208ENST00000559099 CPS1P31327 1500 aa13.74□□□□□ -0.21
HMG20A-208ENST00000559099 AGLP35573 1532 aa13.74□□□□□ -0.21
HMG20A-208ENST00000559099 NPATQ14207 1427 aa13.73□□□□□ -0.21
HMG20A-208ENST00000559099 PKD2Q13563 968 aa13.73□□□□□ -0.21
HMG20A-208ENST00000559099 KDM5CP41229 1560 aa13.73□□□□□ -0.21
HMG20A-208ENST00000559099 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
HMG20A-208ENST00000559099 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
HMG20A-208ENST00000559099 SUPT6HQ7KZ85 1726 aaKnown RBP13.72□□□□□ -0.21
HMG20A-208ENST00000559099 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
HMG20A-208ENST00000559099 SAMD9Q5K651 1589 aa13.71□□□□□ -0.21
HMG20A-208ENST00000559099 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
HMG20A-208ENST00000559099 PTPRKQ15262 1439 aa13.7□□□□□ -0.22
HMG20A-208ENST00000559099 CEP170BQ9Y4F5 1589 aaPredicted RBP13.7□□□□□ -0.22
HMG20A-208ENST00000559099 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
HMG20A-208ENST00000559099 PLCH2O75038 1416 aa13.69□□□□□ -0.22
HMG20A-208ENST00000559099 CNTLNQ9NXG0 1405 aa13.69□□□□□ -0.22
HMG20A-208ENST00000559099 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
HMG20A-208ENST00000559099 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
HMG20A-208ENST00000559099 SENP3Q9H4L4 574 aaPredicted RBP13.68□□□□□ -0.22
HMG20A-208ENST00000559099 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
HMG20A-208ENST00000559099 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
HMG20A-208ENST00000559099 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
HMG20A-208ENST00000559099 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
HMG20A-208ENST00000559099 VWDEQ8N2E2 1590 aa13.65□□□□□ -0.22
HMG20A-208ENST00000559099 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
HMG20A-208ENST00000559099 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
HMG20A-208ENST00000559099 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
HMG20A-208ENST00000559099 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
HMG20A-208ENST00000559099 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
HMG20A-208ENST00000559099 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
HMG20A-208ENST00000559099 RNF17Q9BXT8 1623 aaKnown RBP13.6□□□□□ -0.23
HMG20A-208ENST00000559099 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
HMG20A-208ENST00000559099 DNMT1P26358 1616 aaKnown RBP13.59□□□□□ -0.23
HMG20A-208ENST00000559099 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
HMG20A-208ENST00000559099 CLTCQ00610 1675 aaKnown RBP13.57□□□□□ -0.24
HMG20A-208ENST00000559099 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
HMG20A-208ENST00000559099 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
HMG20A-208ENST00000559099 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
HMG20A-208ENST00000559099 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
HMG20A-208ENST00000559099 LRRC7Q96NW7 1537 aa13.54□□□□□ -0.24
HMG20A-208ENST00000559099 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
HMG20A-208ENST00000559099 KIF14Q15058 1648 aa13.53□□□□□ -0.24
HMG20A-208ENST00000559099 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
HMG20A-208ENST00000559099 SYNMO15061 1565 aa13.52□□□□□ -0.25
HMG20A-208ENST00000559099 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
HMG20A-208ENST00000559099 ABCC1P33527 1531 aa13.49□□□□□ -0.25
HMG20A-208ENST00000559099 MED14O60244 1454 aa13.47□□□□□ -0.25
HMG20A-208ENST00000559099 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
HMG20A-208ENST00000559099 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
HMG20A-208ENST00000559099 IQGAP1P46940 1657 aa13.45□□□□□ -0.26
HMG20A-208ENST00000559099 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
HMG20A-208ENST00000559099 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
HMG20A-208ENST00000559099 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
HMG20A-208ENST00000559099 FAM135BQ49AJ0 1406 aa13.42□□□□□ -0.26
HMG20A-208ENST00000559099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
HMG20A-208ENST00000559099 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
HMG20A-208ENST00000559099 PREX2Q70Z35 1606 aa13.4□□□□□ -0.26
HMG20A-208ENST00000559099 ANKLE2Q86XL3 938 aa13.4□□□□□ -0.26
HMG20A-208ENST00000559099 TRIM52Q96A61 297 aa13.39□□□□□ -0.27
HMG20A-208ENST00000559099 ROBO1Q9Y6N7 1651 aa13.38□□□□□ -0.27
HMG20A-208ENST00000559099 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
HMG20A-208ENST00000559099 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
HMG20A-208ENST00000559099 TNRQ92752 1358 aa13.36□□□□□ -0.27
HMG20A-208ENST00000559099 TROQ12816 1431 aaPredicted RBP13.36□□□□□ -0.27
HMG20A-208ENST00000559099 LRP6O75581 1613 aa13.35□□□□□ -0.27
HMG20A-208ENST00000559099 A2MP01023 1474 aa13.34□□□□□ -0.27
HMG20A-208ENST00000559099 UGGT1Q9NYU2 1555 aa13.33□□□□□ -0.28
HMG20A-208ENST00000559099 INO80Q9ULG1 1556 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms