RNA–Protein interactions for RNA: ENST00000558892.1

USP8-206, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-206ENST00000558892 SCAPERQ9BY12 1400 aa24.55■■□□□ 1.52
USP8-206ENST00000558892 PLCH2O75038 1416 aa24.52■■□□□ 1.52
USP8-206ENST00000558892 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
USP8-206ENST00000558892 ATP10AO60312 1499 aa24.5■■□□□ 1.51
USP8-206ENST00000558892 ARHGEF12Q9NZN5 1544 aa24.47■■□□□ 1.51
USP8-206ENST00000558892 C9orf84Q5VXU9 1444 aa24.47■■□□□ 1.51
USP8-206ENST00000558892 EFCAB2Q5VUJ9 269 aa24.46■■□□□ 1.51
USP8-206ENST00000558892 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
USP8-206ENST00000558892 MYO5CQ9NQX4 1742 aa24.43■■□□□ 1.5
USP8-206ENST00000558892 CEBPAP49715 358 aaPredicted RBP24.42■■□□□ 1.5
USP8-206ENST00000558892 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
USP8-206ENST00000558892 DMRT2Q9Y5R5 561 aa24.41■■□□□ 1.5
USP8-206ENST00000558892 CDK11AQ9UQ88 783 aaPredicted RBP24.4■■□□□ 1.5
USP8-206ENST00000558892 ZNF518AQ6AHZ1 1483 aa24.38■■□□□ 1.49
USP8-206ENST00000558892 FMN1Q68DA7 1419 aa24.37■■□□□ 1.49
USP8-206ENST00000558892 SETD1BQ9UPS6 1966 aaKnown RBP24.36■■□□□ 1.49
USP8-206ENST00000558892 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
USP8-206ENST00000558892 MYT1LQ9UL68 1186 aa24.34■■□□□ 1.49
USP8-206ENST00000558892 STRCQ7RTU9 1775 aa24.34■■□□□ 1.49
USP8-206ENST00000558892 AFAP1Q8N556 730 aa24.33■■□□□ 1.49
USP8-206ENST00000558892 KIF14Q15058 1648 aa24.32■■□□□ 1.48
USP8-206ENST00000558892 DISP3Q9P2K9 1392 aa24.32■■□□□ 1.48
USP8-206ENST00000558892 ARHGAP5Q13017 1502 aa24.32■■□□□ 1.48
USP8-206ENST00000558892 KDM5CP41229 1560 aa24.32■■□□□ 1.48
USP8-206ENST00000558892 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
USP8-206ENST00000558892 TROQ12816 1431 aaPredicted RBP24.29■■□□□ 1.48
USP8-206ENST00000558892 CLIP1P30622 1438 aa24.28■■□□□ 1.48
USP8-206ENST00000558892 DIP2CQ9Y2E4 1556 aa24.27■■□□□ 1.48
USP8-206ENST00000558892 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
USP8-206ENST00000558892 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
USP8-206ENST00000558892 REREQ9P2R6 1566 aa24.25■■□□□ 1.47
USP8-206ENST00000558892 ESF1Q9H501 851 aaKnown RBP24.25■■□□□ 1.47
USP8-206ENST00000558892 ILDR2Q71H61 639 aa24.24■■□□□ 1.47
USP8-206ENST00000558892 PTPRTO14522 1441 aa24.23■■□□□ 1.47
USP8-206ENST00000558892 C3P01024 1663 aa24.22■■□□□ 1.47
USP8-206ENST00000558892 MLH3Q9UHC1 1453 aa24.22■■□□□ 1.47
USP8-206ENST00000558892 ABCA6Q8N139 1617 aa24.21■■□□□ 1.47
USP8-206ENST00000558892 SOCS7O14512 581 aa24.21■■□□□ 1.47
USP8-206ENST00000558892 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
USP8-206ENST00000558892 AGLP35573 1532 aa24.19■■□□□ 1.46
USP8-206ENST00000558892 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
USP8-206ENST00000558892 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
USP8-206ENST00000558892 PREX2Q70Z35 1606 aa24.14■■□□□ 1.46
USP8-206ENST00000558892 ABCC1P33527 1531 aa24.14■■□□□ 1.45
USP8-206ENST00000558892 CNTLNQ9NXG0 1405 aa24.13■■□□□ 1.45
USP8-206ENST00000558892 LTBP4Q8N2S1 1624 aa24.12■■□□□ 1.45
USP8-206ENST00000558892 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
USP8-206ENST00000558892 ITSN2Q9NZM3 1697 aa24.11■■□□□ 1.45
USP8-206ENST00000558892 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
USP8-206ENST00000558892 IQSEC2Q5JU85 1478 aa24.1■■□□□ 1.45
USP8-206ENST00000558892 KIDINS220Q9ULH0 1771 aa24.09■■□□□ 1.45
USP8-206ENST00000558892 CCDC18Q5T9S5 1454 aa24.07■■□□□ 1.44
USP8-206ENST00000558892 NPATQ14207 1427 aa24.04■■□□□ 1.44
USP8-206ENST00000558892 CAMSAP1Q5T5Y3 1602 aa24.03■■□□□ 1.44
USP8-206ENST00000558892 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
USP8-206ENST00000558892 MROH2AA6NES4 1674 aa24.03■■□□□ 1.44
USP8-206ENST00000558892 CDC42BPAQ5VT25 1732 aa24.03■■□□□ 1.44
USP8-206ENST00000558892 SAMD9LQ8IVG5 1584 aa24.01■■□□□ 1.43
USP8-206ENST00000558892 ZMYM3Q14202 1370 aa24.01■■□□□ 1.43
USP8-206ENST00000558892 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
USP8-206ENST00000558892 SPAG9O60271 1321 aaKnown RBP23.98■■□□□ 1.43
USP8-206ENST00000558892 NCKAP5LQ9HCH0 1330 aa23.97■■□□□ 1.43
USP8-206ENST00000558892 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
USP8-206ENST00000558892 SYCP2Q9BX26 1530 aa23.95■■□□□ 1.43
USP8-206ENST00000558892 ZNF335Q9H4Z2 1342 aaPredicted RBP23.94■■□□□ 1.42
USP8-206ENST00000558892 HNRNPMP52272 730 aaKnown RBP eCLIP23.93■■□□□ 1.42
USP8-206ENST00000558892 UBAP1LF5GYI3 381 aa23.92■■□□□ 1.42
USP8-206ENST00000558892 PKD2Q13563 968 aa23.92■■□□□ 1.42
USP8-206ENST00000558892 FYCO1Q9BQS8 1478 aa23.92■■□□□ 1.42
USP8-206ENST00000558892 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
USP8-206ENST00000558892 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
USP8-206ENST00000558892 GPATCH8Q9UKJ3 1502 aaKnown RBP23.91■■□□□ 1.42
USP8-206ENST00000558892 PLA2R1Q13018 1463 aa23.91■■□□□ 1.42
USP8-206ENST00000558892 ZNF142P52746 1687 aaPredicted RBP23.9■■□□□ 1.42
USP8-206ENST00000558892 MYO3AQ8NEV4 1616 aa23.89■■□□□ 1.42
USP8-206ENST00000558892 A2MP01023 1474 aa23.88■■□□□ 1.41
USP8-206ENST00000558892 KIAA1107Q9UPP5 1409 aa23.88■■□□□ 1.41
USP8-206ENST00000558892 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
USP8-206ENST00000558892 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
USP8-206ENST00000558892 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
USP8-206ENST00000558892 CEP170BQ9Y4F5 1589 aaPredicted RBP23.87■■□□□ 1.41
USP8-206ENST00000558892 PTPRKQ15262 1439 aa23.87■■□□□ 1.41
USP8-206ENST00000558892 GGT6Q6P531 493 aa23.87■■□□□ 1.41
USP8-206ENST00000558892 CFDP1Q9UEE9 299 aaPredicted RBP23.87■■□□□ 1.41
USP8-206ENST00000558892 TCOF1Q13428 1488 aaKnown RBP23.86■■□□□ 1.41
USP8-206ENST00000558892 INO80Q9ULG1 1556 aaPredicted RBP23.86■■□□□ 1.41
USP8-206ENST00000558892 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
USP8-206ENST00000558892 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
USP8-206ENST00000558892 ADGBQ8N7X0 1667 aa23.79■■□□□ 1.4
USP8-206ENST00000558892 A2ML1A8K2U0 1454 aa23.76■■□□□ 1.39
USP8-206ENST00000558892 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
USP8-206ENST00000558892 DNMT1P26358 1616 aaKnown RBP23.73■■□□□ 1.39
USP8-206ENST00000558892 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
USP8-206ENST00000558892 ZNF644Q9H582 1327 aaPredicted RBP23.7■■□□□ 1.38
USP8-206ENST00000558892 TOM1O60784 492 aa23.69■■□□□ 1.38
USP8-206ENST00000558892 PIP4K2BP78356 416 aa23.69■■□□□ 1.38
USP8-206ENST00000558892 CPS1P31327 1500 aa23.69■■□□□ 1.38
USP8-206ENST00000558892 RTEL1-TNFRSF6BF6WH68 1400 aa23.68■■□□□ 1.38
USP8-206ENST00000558892 POLR1AO95602 1720 aaPredicted RBP23.68■■□□□ 1.38
USP8-206ENST00000558892 HSPA1LP34931 641 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms