RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 LAS1LQ9Y4W2 734 aaKnown RBP14.16□□□□□ -0.14
TMC3-202ENST00000558726 CFTRP13569 1480 aa14.16□□□□□ -0.14
TMC3-202ENST00000558726 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
TMC3-202ENST00000558726 TIAM1Q13009 1591 aa14.15□□□□□ -0.14
TMC3-202ENST00000558726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
TMC3-202ENST00000558726 CFAP53Q96M91 514 aa14.14□□□□□ -0.15
TMC3-202ENST00000558726 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
TMC3-202ENST00000558726 CC2D1BQ5T0F9 858 aaKnown RBP14.13□□□□□ -0.15
TMC3-202ENST00000558726 NLRP13Q86W25 1043 aa14.13□□□□□ -0.15
TMC3-202ENST00000558726 EFCAB5A4FU69 1503 aa14.13□□□□□ -0.15
TMC3-202ENST00000558726 CNTLNQ9NXG0 1405 aa14.13□□□□□ -0.15
TMC3-202ENST00000558726 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
TMC3-202ENST00000558726 NUP155O75694 1391 aa14.12□□□□□ -0.15
TMC3-202ENST00000558726 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
TMC3-202ENST00000558726 ARID4BQ4LE39 1312 aaPredicted RBP14.11□□□□□ -0.15
TMC3-202ENST00000558726 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
TMC3-202ENST00000558726 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
TMC3-202ENST00000558726 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
TMC3-202ENST00000558726 MYBBP1AQ9BQG0 1328 aaKnown RBP14.09□□□□□ -0.15
TMC3-202ENST00000558726 RGS3P49796 1198 aa14.08□□□□□ -0.16
TMC3-202ENST00000558726 MS4A1P11836 297 aa14.08□□□□□ -0.16
TMC3-202ENST00000558726 USP35Q9P2H5 1018 aa14.07□□□□□ -0.16
TMC3-202ENST00000558726 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
TMC3-202ENST00000558726 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
TMC3-202ENST00000558726 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMC3-202ENST00000558726 RSPH4AQ5TD94 716 aa14.07□□□□□ -0.16
TMC3-202ENST00000558726 USP47Q96K76 1375 aa14.05□□□□□ -0.16
TMC3-202ENST00000558726 WDR97A6NE52 1622 aa14.05□□□□□ -0.16
TMC3-202ENST00000558726 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
TMC3-202ENST00000558726 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
TMC3-202ENST00000558726 GAPVD1Q14C86 1478 aa14.03□□□□□ -0.16
TMC3-202ENST00000558726 FTSJ3Q8IY81 847 aaKnown RBP14.02□□□□□ -0.16
TMC3-202ENST00000558726 GOLGA6L22H0YM25 854 aa14.02□□□□□ -0.16
TMC3-202ENST00000558726 KIF7Q2M1P5 1343 aa14.02□□□□□ -0.17
TMC3-202ENST00000558726 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
TMC3-202ENST00000558726 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
TMC3-202ENST00000558726 RRP1P56182 461 aaKnown RBP14.01□□□□□ -0.17
TMC3-202ENST00000558726 CHMP4BQ9H444 224 aaKnown RBP14□□□□□ -0.17
TMC3-202ENST00000558726 TRIM44Q96DX7 344 aaPredicted RBP14□□□□□ -0.17
TMC3-202ENST00000558726 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
TMC3-202ENST00000558726 KANK1Q14678 1352 aa13.99□□□□□ -0.17
TMC3-202ENST00000558726 L1TD1Q5T7N2 865 aaKnown RBP13.99□□□□□ -0.17
TMC3-202ENST00000558726 ARXQ96QS3 562 aa13.99□□□□□ -0.17
TMC3-202ENST00000558726 ST20-MTHFSA0A0A6YYL1 179 aa13.99□□□□□ -0.17
TMC3-202ENST00000558726 FRAT1Q92837 279 aaPredicted RBP13.98□□□□□ -0.17
TMC3-202ENST00000558726 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
TMC3-202ENST00000558726 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.17
TMC3-202ENST00000558726 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
TMC3-202ENST00000558726 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
TMC3-202ENST00000558726 PDE4AP27815 886 aa13.97□□□□□ -0.17
TMC3-202ENST00000558726 MIA2Q96PC5 1412 aa13.97□□□□□ -0.17
TMC3-202ENST00000558726 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
TMC3-202ENST00000558726 MAPK8IP3Q9UPT6 1336 aa13.96□□□□□ -0.17
TMC3-202ENST00000558726 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.18
TMC3-202ENST00000558726 NEUROD2Q15784 382 aa13.95□□□□□ -0.18
TMC3-202ENST00000558726 EIF3AQ14152 1382 aaKnown RBP13.95□□□□□ -0.18
TMC3-202ENST00000558726 CCDC144AA2RUR9 1427 aa13.94□□□□□ -0.18
TMC3-202ENST00000558726 CENPQQ7L2Z9 268 aaPredicted RBP13.94□□□□□ -0.18
TMC3-202ENST00000558726 PNNQ9H307 717 aaKnown RBP13.94□□□□□ -0.18
TMC3-202ENST00000558726 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
TMC3-202ENST00000558726 EXOC6Q8TAG9 804 aa13.93□□□□□ -0.18
TMC3-202ENST00000558726 NAIPQ13075 1403 aa13.92□□□□□ -0.18
TMC3-202ENST00000558726 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
TMC3-202ENST00000558726 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
TMC3-202ENST00000558726 ESF1Q9H501 851 aaKnown RBP13.91□□□□□ -0.18
TMC3-202ENST00000558726 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
TMC3-202ENST00000558726 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
TMC3-202ENST00000558726 EFCAB2Q5VUJ9 269 aa13.9□□□□□ -0.18
TMC3-202ENST00000558726 NGEFQ8N5V2 710 aa13.9□□□□□ -0.18
TMC3-202ENST00000558726 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
TMC3-202ENST00000558726 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
TMC3-202ENST00000558726 HNRNPMP52272 730 aaKnown RBP eCLIP13.89□□□□□ -0.19
TMC3-202ENST00000558726 FAM161AQ3B820 660 aa13.89□□□□□ -0.19
TMC3-202ENST00000558726 SMG6Q86US8 1419 aaKnown RBP13.89□□□□□ -0.19
TMC3-202ENST00000558726 CASC1Q6TDU7 716 aa13.88□□□□□ -0.19
TMC3-202ENST00000558726 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
TMC3-202ENST00000558726 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
TMC3-202ENST00000558726 PANK3Q9H999 370 aa13.87□□□□□ -0.19
TMC3-202ENST00000558726 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
TMC3-202ENST00000558726 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
TMC3-202ENST00000558726 ANKRD50Q9ULJ7 1429 aa13.86□□□□□ -0.19
TMC3-202ENST00000558726 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
TMC3-202ENST00000558726 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
TMC3-202ENST00000558726 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
TMC3-202ENST00000558726 MAPKBP1O60336 1514 aa13.85□□□□□ -0.19
TMC3-202ENST00000558726 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
TMC3-202ENST00000558726 PTMSP20962 102 aa13.85□□□□□ -0.19
TMC3-202ENST00000558726 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
TMC3-202ENST00000558726 WASHC2CQ9Y4E1 1318 aa13.85□□□□□ -0.19
TMC3-202ENST00000558726 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
TMC3-202ENST00000558726 CRBNQ96SW2 442 aa13.85□□□□□ -0.19
TMC3-202ENST00000558726 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
TMC3-202ENST00000558726 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
TMC3-202ENST00000558726 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
TMC3-202ENST00000558726 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
TMC3-202ENST00000558726 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.19
TMC3-202ENST00000558726 CUL7Q14999 1698 aa13.83□□□□□ -0.2
TMC3-202ENST00000558726 KIAA1107Q9UPP5 1409 aa13.83□□□□□ -0.2
TMC3-202ENST00000558726 NBPF8Q3BBV2 869 aa13.83□□□□□ -0.2
TMC3-202ENST00000558726 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms