RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MADDQ8WXG6 1647 aa8.8□□□□□ -1
SPG11-208ENST00000558155 DENND4BO75064 1496 aaPredicted RBP8.8□□□□□ -1
SPG11-208ENST00000558155 PRXQ9BXM0 1461 aa8.8□□□□□ -1
SPG11-208ENST00000558155 AKNAQ7Z591 1439 aa8.79□□□□□ -1
SPG11-208ENST00000558155 RIMS1Q86UR5 1692 aaKnown RBP8.78□□□□□ -1
SPG11-208ENST00000558155 MLECQ14165 292 aa8.78□□□□□ -1
SPG11-208ENST00000558155 SOCS7O14512 581 aa8.77□□□□□ -1.01
SPG11-208ENST00000558155 CSRNP3Q8WYN3 585 aa8.77□□□□□ -1.01
SPG11-208ENST00000558155 FHOD3Q2V2M9 1422 aa8.77□□□□□ -1.01
SPG11-208ENST00000558155 FANCAO15360 1455 aa8.77□□□□□ -1.01
SPG11-208ENST00000558155 RAPGEF6Q8TEU7 1601 aa8.76□□□□□ -1.01
SPG11-208ENST00000558155 DISP3Q9P2K9 1392 aa8.76□□□□□ -1.01
SPG11-208ENST00000558155 RANGAP1P46060 587 aaPredicted RBP8.76□□□□□ -1.01
SPG11-208ENST00000558155 FRMPD1Q5SYB0 1578 aa8.76□□□□□ -1.01
SPG11-208ENST00000558155 MAGI2Q86UL8 1455 aa8.75□□□□□ -1.01
SPG11-208ENST00000558155 SLC4A2P04920 1241 aa8.74□□□□□ -1.01
SPG11-208ENST00000558155 ARHGEF40Q8TER5 1519 aa8.74□□□□□ -1.01
SPG11-208ENST00000558155 ILDR2Q71H61 639 aa8.73□□□□□ -1.01
SPG11-208ENST00000558155 RICTORQ6R327 1708 aa8.73□□□□□ -1.01
SPG11-208ENST00000558155 CFAP74Q9C0B2 1584 aa8.73□□□□□ -1.01
SPG11-208ENST00000558155 NUP153P49790 1475 aaKnown RBP8.72□□□□□ -1.01
SPG11-208ENST00000558155 SETD1BQ9UPS6 1966 aaKnown RBP8.72□□□□□ -1.01
SPG11-208ENST00000558155 EFCAB5A4FU69 1503 aa8.72□□□□□ -1.01
SPG11-208ENST00000558155 ZFYVE16Q7Z3T8 1539 aa8.72□□□□□ -1.01
SPG11-208ENST00000558155 SAMD9Q5K651 1589 aa8.72□□□□□ -1.01
SPG11-208ENST00000558155 YEATS2Q9ULM3 1422 aa8.71□□□□□ -1.01
SPG11-208ENST00000558155 CEBPAP49715 358 aaPredicted RBP8.71□□□□□ -1.02
SPG11-208ENST00000558155 EFCAB2Q5VUJ9 269 aa8.71□□□□□ -1.02
SPG11-208ENST00000558155 SCAPERQ9BY12 1400 aa8.71□□□□□ -1.02
SPG11-208ENST00000558155 ATP10AO60312 1499 aa8.7□□□□□ -1.02
SPG11-208ENST00000558155 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
SPG11-208ENST00000558155 FER1L4A9Z1Z3 1794 aa8.7□□□□□ -1.02
SPG11-208ENST00000558155 ZMYM4Q5VZL5 1548 aa8.7□□□□□ -1.02
SPG11-208ENST00000558155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
SPG11-208ENST00000558155 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
SPG11-208ENST00000558155 CDK11AQ9UQ88 783 aaPredicted RBP8.69□□□□□ -1.02
SPG11-208ENST00000558155 PLCH2O75038 1416 aa8.69□□□□□ -1.02
SPG11-208ENST00000558155 HECW1Q76N89 1606 aa8.69□□□□□ -1.02
SPG11-208ENST00000558155 ATP1B4Q9UN42 357 aaPredicted RBP8.68□□□□□ -1.02
SPG11-208ENST00000558155 TTC37Q6PGP7 1564 aa8.68□□□□□ -1.02
SPG11-208ENST00000558155 C9orf84Q5VXU9 1444 aa8.67□□□□□ -1.02
SPG11-208ENST00000558155 PREX1Q8TCU6 1659 aa8.67□□□□□ -1.02
SPG11-208ENST00000558155 ARHGEF12Q9NZN5 1544 aa8.66□□□□□ -1.02
SPG11-208ENST00000558155 UHRF1BP1Q6BDS2 1440 aa8.66□□□□□ -1.02
SPG11-208ENST00000558155 SIGLEC1Q9BZZ2 1709 aa8.66□□□□□ -1.02
SPG11-208ENST00000558155 PTPRTO14522 1441 aa8.65□□□□□ -1.02
SPG11-208ENST00000558155 ABCB7O75027 752 aa8.65□□□□□ -1.02
SPG11-208ENST00000558155 KCNA4P22459 653 aa8.65□□□□□ -1.02
SPG11-208ENST00000558155 AFAP1Q8N556 730 aa8.65□□□□□ -1.02
SPG11-208ENST00000558155 STRCQ7RTU9 1775 aa8.65□□□□□ -1.02
SPG11-208ENST00000558155 EEA1Q15075 1411 aa8.63□□□□□ -1.03
SPG11-208ENST00000558155 CDK13Q14004 1512 aaKnown RBP8.61□□□□□ -1.03
SPG11-208ENST00000558155 ZNF518AQ6AHZ1 1483 aa8.61□□□□□ -1.03
SPG11-208ENST00000558155 TRAPPC8Q9Y2L5 1435 aa8.61□□□□□ -1.03
SPG11-208ENST00000558155 IQSEC2Q5JU85 1478 aa8.6□□□□□ -1.03
SPG11-208ENST00000558155 UBTFP17480 764 aaKnown RBP8.6□□□□□ -1.03
SPG11-208ENST00000558155 SPATA31D1Q6ZQQ2 1576 aa8.6□□□□□ -1.03
SPG11-208ENST00000558155 MYO5CQ9NQX4 1742 aa8.6□□□□□ -1.03
SPG11-208ENST00000558155 UBAP1LF5GYI3 381 aa8.59□□□□□ -1.03
SPG11-208ENST00000558155 FMN1Q68DA7 1419 aa8.59□□□□□ -1.03
SPG11-208ENST00000558155 CLIP1P30622 1438 aa8.58□□□□□ -1.04
SPG11-208ENST00000558155 ARHGAP5Q13017 1502 aa8.58□□□□□ -1.04
SPG11-208ENST00000558155 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
SPG11-208ENST00000558155 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
SPG11-208ENST00000558155 TROQ12816 1431 aaPredicted RBP8.57□□□□□ -1.04
SPG11-208ENST00000558155 CNTLNQ9NXG0 1405 aa8.57□□□□□ -1.04
SPG11-208ENST00000558155 C3P01024 1663 aa8.57□□□□□ -1.04
SPG11-208ENST00000558155 PKD2Q13563 968 aa8.57□□□□□ -1.04
SPG11-208ENST00000558155 REREQ9P2R6 1566 aa8.56□□□□□ -1.04
SPG11-208ENST00000558155 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
SPG11-208ENST00000558155 NCOA1Q15788 1441 aa8.56□□□□□ -1.04
SPG11-208ENST00000558155 AGLP35573 1532 aa8.56□□□□□ -1.04
SPG11-208ENST00000558155 KDM5CP41229 1560 aa8.56□□□□□ -1.04
SPG11-208ENST00000558155 KIF14Q15058 1648 aa8.55□□□□□ -1.04
SPG11-208ENST00000558155 EHMT2Q96KQ7 1210 aa8.55□□□□□ -1.04
SPG11-208ENST00000558155 ZNF219Q9P2Y4 722 aaPredicted RBP8.55□□□□□ -1.04
SPG11-208ENST00000558155 ZMYM3Q14202 1370 aa8.55□□□□□ -1.04
SPG11-208ENST00000558155 DIP2CQ9Y2E4 1556 aa8.55□□□□□ -1.04
SPG11-208ENST00000558155 NPATQ14207 1427 aa8.54□□□□□ -1.04
SPG11-208ENST00000558155 ZNF335Q9H4Z2 1342 aaPredicted RBP8.54□□□□□ -1.04
SPG11-208ENST00000558155 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
SPG11-208ENST00000558155 CAMSAP1Q5T5Y3 1602 aa8.53□□□□□ -1.04
SPG11-208ENST00000558155 CDC42BPBQ9Y5S2 1711 aa8.52□□□□□ -1.05
SPG11-208ENST00000558155 TOM1O60784 492 aa8.52□□□□□ -1.05
SPG11-208ENST00000558155 SPAG9O60271 1321 aaKnown RBP8.52□□□□□ -1.05
SPG11-208ENST00000558155 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
SPG11-208ENST00000558155 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
SPG11-208ENST00000558155 HNRNPMP52272 730 aaKnown RBP eCLIP8.5□□□□□ -1.05
SPG11-208ENST00000558155 GGT6Q6P531 493 aa8.5□□□□□ -1.05
SPG11-208ENST00000558155 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
SPG11-208ENST00000558155 HSPA1LP34931 641 aa8.49□□□□□ -1.05
SPG11-208ENST00000558155 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
SPG11-208ENST00000558155 MROH2AA6NES4 1674 aa8.49□□□□□ -1.05
SPG11-208ENST00000558155 ABCC1P33527 1531 aa8.49□□□□□ -1.05
SPG11-208ENST00000558155 PLA2R1Q13018 1463 aa8.48□□□□□ -1.05
SPG11-208ENST00000558155 ITSN2Q9NZM3 1697 aa8.48□□□□□ -1.05
SPG11-208ENST00000558155 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
SPG11-208ENST00000558155 APLP2Q06481 763 aa8.47□□□□□ -1.05
SPG11-208ENST00000558155 CFDP1Q9UEE9 299 aaPredicted RBP8.47□□□□□ -1.05
SPG11-208ENST00000558155 PREX2Q70Z35 1606 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms