RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 CCDC136Q96JN2 1154 aa18.65■□□□□ 0.58
LINC00639-205ENST00000557440 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.58
LINC00639-205ENST00000557440 KIF7Q2M1P5 1343 aa18.64■□□□□ 0.57
LINC00639-205ENST00000557440 ST20-MTHFSA0A0A6YYL1 179 aa18.64■□□□□ 0.57
LINC00639-205ENST00000557440 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.57
LINC00639-205ENST00000557440 PRDM2Q13029 1718 aa18.64■□□□□ 0.57
LINC00639-205ENST00000557440 MAP3K1Q13233 1512 aa18.61■□□□□ 0.57
LINC00639-205ENST00000557440 EPRSP07814 1512 aaKnown RBP18.6■□□□□ 0.57
LINC00639-205ENST00000557440 ANP32EQ9BTT0 268 aa18.59■□□□□ 0.57
LINC00639-205ENST00000557440 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.57
LINC00639-205ENST00000557440 NBR1Q14596 966 aa18.57■□□□□ 0.56
LINC00639-205ENST00000557440 CCDC7Q96M83 1385 aa18.57■□□□□ 0.56
LINC00639-205ENST00000557440 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
LINC00639-205ENST00000557440 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
LINC00639-205ENST00000557440 BCL11AQ9H165 835 aa18.53■□□□□ 0.56
LINC00639-205ENST00000557440 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
LINC00639-205ENST00000557440 PTPN23Q9H3S7 1636 aa18.52■□□□□ 0.56
LINC00639-205ENST00000557440 USP47Q96K76 1375 aa18.52■□□□□ 0.56
LINC00639-205ENST00000557440 ANKRD30AQ9BXX3 1397 aa18.52■□□□□ 0.56
LINC00639-205ENST00000557440 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.55
LINC00639-205ENST00000557440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC00639-205ENST00000557440 EHBP1L1Q8N3D4 1523 aa18.51■□□□□ 0.55
LINC00639-205ENST00000557440 CARMIL2Q6F5E8 1435 aa18.5■□□□□ 0.55
LINC00639-205ENST00000557440 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
LINC00639-205ENST00000557440 CUL7Q14999 1698 aa18.49■□□□□ 0.55
LINC00639-205ENST00000557440 MAGI3Q5TCQ9 1506 aa18.49■□□□□ 0.55
LINC00639-205ENST00000557440 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
LINC00639-205ENST00000557440 DAPK1P53355 1430 aa18.48■□□□□ 0.55
LINC00639-205ENST00000557440 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
LINC00639-205ENST00000557440 ABCC5O15440 1437 aa18.47■□□□□ 0.55
LINC00639-205ENST00000557440 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
LINC00639-205ENST00000557440 IQGAP2Q13576 1575 aa18.46■□□□□ 0.55
LINC00639-205ENST00000557440 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
LINC00639-205ENST00000557440 CNTLNQ9NXG0 1405 aa18.45■□□□□ 0.54
LINC00639-205ENST00000557440 ANKRD30BQ9BXX2 1392 aa18.44■□□□□ 0.54
LINC00639-205ENST00000557440 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
LINC00639-205ENST00000557440 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
LINC00639-205ENST00000557440 ANKRD50Q9ULJ7 1429 aa18.43■□□□□ 0.54
LINC00639-205ENST00000557440 PLIN1O60240 522 aa18.41■□□□□ 0.54
LINC00639-205ENST00000557440 PTPRGP23470 1445 aa18.4■□□□□ 0.54
LINC00639-205ENST00000557440 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
LINC00639-205ENST00000557440 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
LINC00639-205ENST00000557440 CTTNBP2Q8WZ74 1663 aa18.39■□□□□ 0.53
LINC00639-205ENST00000557440 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.53
LINC00639-205ENST00000557440 MIA2Q96PC5 1412 aa18.38■□□□□ 0.53
LINC00639-205ENST00000557440 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
LINC00639-205ENST00000557440 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
LINC00639-205ENST00000557440 KDM6BO15054 1643 aa18.38■□□□□ 0.53
LINC00639-205ENST00000557440 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
LINC00639-205ENST00000557440 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
LINC00639-205ENST00000557440 TROQ12816 1431 aaPredicted RBP18.35■□□□□ 0.53
LINC00639-205ENST00000557440 KIAA0586Q9BVV6 1533 aa18.35■□□□□ 0.53
LINC00639-205ENST00000557440 ANP32AP39687 249 aaKnown RBP18.35■□□□□ 0.53
LINC00639-205ENST00000557440 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
LINC00639-205ENST00000557440 PANK3Q9H999 370 aa18.35■□□□□ 0.53
LINC00639-205ENST00000557440 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
LINC00639-205ENST00000557440 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
LINC00639-205ENST00000557440 ARHGEF11O15085 1522 aa18.34■□□□□ 0.53
LINC00639-205ENST00000557440 NUP153P49790 1475 aaKnown RBP18.34■□□□□ 0.53
LINC00639-205ENST00000557440 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
LINC00639-205ENST00000557440 AFAP1Q8N556 730 aa18.33■□□□□ 0.53
LINC00639-205ENST00000557440 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
LINC00639-205ENST00000557440 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
LINC00639-205ENST00000557440 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
LINC00639-205ENST00000557440 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
LINC00639-205ENST00000557440 SAFB2Q14151 953 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC00639-205ENST00000557440 EXOC6Q8TAG9 804 aa18.3■□□□□ 0.52
LINC00639-205ENST00000557440 SKAP1Q86WV1 359 aa18.29■□□□□ 0.52
LINC00639-205ENST00000557440 CCDC146Q8IYE0 955 aa18.29■□□□□ 0.52
LINC00639-205ENST00000557440 KIF3BO15066 747 aa18.29■□□□□ 0.52
LINC00639-205ENST00000557440 MSH5O43196 834 aa18.29■□□□□ 0.52
LINC00639-205ENST00000557440 CAMSAP2Q08AD1 1489 aa18.29■□□□□ 0.52
LINC00639-205ENST00000557440 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
LINC00639-205ENST00000557440 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
LINC00639-205ENST00000557440 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
LINC00639-205ENST00000557440 C9orf84Q5VXU9 1444 aa18.28■□□□□ 0.52
LINC00639-205ENST00000557440 TMF1P82094 1093 aa18.28■□□□□ 0.52
LINC00639-205ENST00000557440 CCDC144AA2RUR9 1427 aa18.27■□□□□ 0.52
LINC00639-205ENST00000557440 CANXP27824 592 aaKnown RBP18.27■□□□□ 0.52
LINC00639-205ENST00000557440 GGT6Q6P531 493 aa18.27■□□□□ 0.52
LINC00639-205ENST00000557440 DAXXQ9UER7 740 aaPredicted RBP18.27■□□□□ 0.52
LINC00639-205ENST00000557440 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
LINC00639-205ENST00000557440 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.51
LINC00639-205ENST00000557440 PNISRQ8TF01 805 aaKnown RBP18.26■□□□□ 0.51
LINC00639-205ENST00000557440 GPATCH8Q9UKJ3 1502 aaKnown RBP18.24■□□□□ 0.51
LINC00639-205ENST00000557440 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
LINC00639-205ENST00000557440 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
LINC00639-205ENST00000557440 EFCAB2Q5VUJ9 269 aa18.24■□□□□ 0.51
LINC00639-205ENST00000557440 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
LINC00639-205ENST00000557440 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
LINC00639-205ENST00000557440 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
LINC00639-205ENST00000557440 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
LINC00639-205ENST00000557440 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
LINC00639-205ENST00000557440 ROCK1Q13464 1354 aa18.22■□□□□ 0.51
LINC00639-205ENST00000557440 MYBBP1AQ9BQG0 1328 aaKnown RBP18.22■□□□□ 0.51
LINC00639-205ENST00000557440 RGS3P49796 1198 aa18.21■□□□□ 0.51
LINC00639-205ENST00000557440 DENND4BO75064 1496 aaPredicted RBP18.21■□□□□ 0.51
LINC00639-205ENST00000557440 PRKCSHP14314 528 aaPredicted RBP18.21■□□□□ 0.51
LINC00639-205ENST00000557440 WDR62O43379 1518 aa18.21■□□□□ 0.51
LINC00639-205ENST00000557440 SPAG9O60271 1321 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms