RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
PPP4R3A-212ENST00000557382 DAPK1P53355 1430 aa12.84□□□□□ -0.35
PPP4R3A-212ENST00000557382 PLB1Q6P1J6 1458 aa12.82□□□□□ -0.36
PPP4R3A-212ENST00000557382 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
PPP4R3A-212ENST00000557382 ABCC5O15440 1437 aa12.81□□□□□ -0.36
PPP4R3A-212ENST00000557382 ADGBQ8N7X0 1667 aa12.81□□□□□ -0.36
PPP4R3A-212ENST00000557382 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
PPP4R3A-212ENST00000557382 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
PPP4R3A-212ENST00000557382 FBLN2P98095 1184 aa12.79□□□□□ -0.36
PPP4R3A-212ENST00000557382 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
PPP4R3A-212ENST00000557382 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
PPP4R3A-212ENST00000557382 RRP7BPQ9NSQ0 103 aa12.78□□□□□ -0.36
PPP4R3A-212ENST00000557382 PRG4Q92954 1404 aaPredicted RBP12.78□□□□□ -0.36
PPP4R3A-212ENST00000557382 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
PPP4R3A-212ENST00000557382 KIF14Q15058 1648 aa12.77□□□□□ -0.36
PPP4R3A-212ENST00000557382 CHD1O14646 1710 aa12.77□□□□□ -0.36
PPP4R3A-212ENST00000557382 KDM6BO15054 1643 aa12.77□□□□□ -0.37
PPP4R3A-212ENST00000557382 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
PPP4R3A-212ENST00000557382 ATP10BO94823 1461 aa12.76□□□□□ -0.37
PPP4R3A-212ENST00000557382 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
PPP4R3A-212ENST00000557382 ABCC10Q5T3U5 1492 aa12.75□□□□□ -0.37
PPP4R3A-212ENST00000557382 CDC42BPAQ5VT25 1732 aa12.75□□□□□ -0.37
PPP4R3A-212ENST00000557382 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
PPP4R3A-212ENST00000557382 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
PPP4R3A-212ENST00000557382 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
PPP4R3A-212ENST00000557382 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
PPP4R3A-212ENST00000557382 ARID3CA6NKF2 412 aa12.73□□□□□ -0.37
PPP4R3A-212ENST00000557382 MPHOSPH9Q99550 1183 aa12.73□□□□□ -0.37
PPP4R3A-212ENST00000557382 PTPRGP23470 1445 aa12.72□□□□□ -0.37
PPP4R3A-212ENST00000557382 TRIM52Q96A61 297 aa12.72□□□□□ -0.37
PPP4R3A-212ENST00000557382 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
PPP4R3A-212ENST00000557382 ARHGEF5Q12774 1597 aa12.71□□□□□ -0.37
PPP4R3A-212ENST00000557382 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
PPP4R3A-212ENST00000557382 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
PPP4R3A-212ENST00000557382 ANKRD30AQ9BXX3 1397 aa12.69□□□□□ -0.38
PPP4R3A-212ENST00000557382 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3A-212ENST00000557382 RPRD2Q5VT52 1461 aaKnown RBP12.68□□□□□ -0.38
PPP4R3A-212ENST00000557382 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
PPP4R3A-212ENST00000557382 PREX2Q70Z35 1606 aa12.66□□□□□ -0.38
PPP4R3A-212ENST00000557382 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
PPP4R3A-212ENST00000557382 PZPP20742 1482 aa12.65□□□□□ -0.38
PPP4R3A-212ENST00000557382 KDM5DQ9BY66 1539 aa12.65□□□□□ -0.38
PPP4R3A-212ENST00000557382 ABCC2Q92887 1545 aa12.64□□□□□ -0.39
PPP4R3A-212ENST00000557382 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
PPP4R3A-212ENST00000557382 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
PPP4R3A-212ENST00000557382 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
PPP4R3A-212ENST00000557382 TEX14Q8IWB6 1497 aa12.63□□□□□ -0.39
PPP4R3A-212ENST00000557382 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
PPP4R3A-212ENST00000557382 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
PPP4R3A-212ENST00000557382 CLASP1Q7Z460 1538 aa12.62□□□□□ -0.39
PPP4R3A-212ENST00000557382 MAST1Q9Y2H9 1570 aa12.62□□□□□ -0.39
PPP4R3A-212ENST00000557382 UHRF1BP1LA0JNW5 1464 aa12.62□□□□□ -0.39
PPP4R3A-212ENST00000557382 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
PPP4R3A-212ENST00000557382 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
PPP4R3A-212ENST00000557382 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
PPP4R3A-212ENST00000557382 CCDC141Q6ZP82 1450 aa12.6□□□□□ -0.39
PPP4R3A-212ENST00000557382 PLEKHH2Q8IVE3 1493 aa12.6□□□□□ -0.39
PPP4R3A-212ENST00000557382 MBD5Q9P267 1494 aa12.6□□□□□ -0.39
PPP4R3A-212ENST00000557382 TSPY4P0CV99 314 aa12.6□□□□□ -0.39
PPP4R3A-212ENST00000557382 TSPY10P0CW01 314 aa12.6□□□□□ -0.39
PPP4R3A-212ENST00000557382 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
PPP4R3A-212ENST00000557382 SAMD9LQ8IVG5 1584 aa12.6□□□□□ -0.39
PPP4R3A-212ENST00000557382 POLR1AO95602 1720 aaPredicted RBP12.59□□□□□ -0.39
PPP4R3A-212ENST00000557382 ANP32CO43423 234 aa12.59□□□□□ -0.39
PPP4R3A-212ENST00000557382 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
PPP4R3A-212ENST00000557382 L3MBTL2Q969R5 705 aa12.59□□□□□ -0.39
PPP4R3A-212ENST00000557382 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
PPP4R3A-212ENST00000557382 EIF4G2P78344 907 aaKnown RBP eCLIP12.58□□□□□ -0.4
PPP4R3A-212ENST00000557382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.4
PPP4R3A-212ENST00000557382 HSPA5P11021 654 aaKnown RBP12.55□□□□□ -0.4
PPP4R3A-212ENST00000557382 PLXNC1O60486 1568 aa12.55□□□□□ -0.4
PPP4R3A-212ENST00000557382 TTC37Q6PGP7 1564 aa12.55□□□□□ -0.4
PPP4R3A-212ENST00000557382 ARHGEF12Q9NZN5 1544 aa12.54□□□□□ -0.4
PPP4R3A-212ENST00000557382 ERCC6L2Q5T890 1561 aa12.54□□□□□ -0.4
PPP4R3A-212ENST00000557382 ZCCHC11Q5TAX3 1644 aaKnown RBP12.54□□□□□ -0.4
PPP4R3A-212ENST00000557382 KIF15Q9NS87 1388 aa12.54□□□□□ -0.4
PPP4R3A-212ENST00000557382 ARAP3Q8WWN8 1544 aa12.53□□□□□ -0.4
PPP4R3A-212ENST00000557382 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
PPP4R3A-212ENST00000557382 ARHGAP5Q13017 1502 aa12.52□□□□□ -0.4
PPP4R3A-212ENST00000557382 UNC13BO14795 1591 aa12.52□□□□□ -0.4
PPP4R3A-212ENST00000557382 PKD2Q13563 968 aa12.52□□□□□ -0.41
PPP4R3A-212ENST00000557382 NUP155O75694 1391 aa12.52□□□□□ -0.41
PPP4R3A-212ENST00000557382 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.41
PPP4R3A-212ENST00000557382 HIRIP3Q9BW71 556 aaPredicted RBP12.51□□□□□ -0.41
PPP4R3A-212ENST00000557382 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.41
PPP4R3A-212ENST00000557382 NBPF8Q3BBV2 869 aa12.5□□□□□ -0.41
PPP4R3A-212ENST00000557382 PLCH2O75038 1416 aa12.5□□□□□ -0.41
PPP4R3A-212ENST00000557382 SYCP2Q9BX26 1530 aa12.5□□□□□ -0.41
PPP4R3A-212ENST00000557382 CNTLNQ9NXG0 1405 aa12.49□□□□□ -0.41
PPP4R3A-212ENST00000557382 CCDC7Q96M83 1385 aa12.49□□□□□ -0.41
PPP4R3A-212ENST00000557382 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
PPP4R3A-212ENST00000557382 DUOX2Q9NRD8 1548 aa12.48□□□□□ -0.41
PPP4R3A-212ENST00000557382 FAM135AQ9P2D6 1515 aa12.47□□□□□ -0.41
PPP4R3A-212ENST00000557382 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
PPP4R3A-212ENST00000557382 IQGAP3Q86VI3 1631 aa12.47□□□□□ -0.41
PPP4R3A-212ENST00000557382 RALGAPBQ86X10 1494 aa12.46□□□□□ -0.41
PPP4R3A-212ENST00000557382 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
PPP4R3A-212ENST00000557382 EFCAB2Q5VUJ9 269 aa12.45□□□□□ -0.42
PPP4R3A-212ENST00000557382 KCNH8Q96L42 1107 aa12.45□□□□□ -0.42
PPP4R3A-212ENST00000557382 ABCC1P33527 1531 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms