RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■■□□□ 13.5
ATXN3-247ENST00000557311 WDR62O43379 1518 aa9.35□□□□□ -0.91
ATXN3-247ENST00000557311 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
ATXN3-247ENST00000557311 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
ATXN3-247ENST00000557311 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
ATXN3-247ENST00000557311 PDAP1Q13442 181 aaKnown RBP9.33□□□□□ -0.92
ATXN3-247ENST00000557311 MARVELD3Q96A59 401 aa9.32□□□□□ -0.92
ATXN3-247ENST00000557311 RGL2O15211 777 aa9.31□□□□□ -0.92
ATXN3-247ENST00000557311 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
ATXN3-247ENST00000557311 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-247ENST00000557311 CABP2Q9NPB3 220 aa9.3□□□□□ -0.92
ATXN3-247ENST00000557311 RTN4Q9NQC3 1192 aaKnown RBP9.3□□□□□ -0.92
ATXN3-247ENST00000557311 VGFO15240 615 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-247ENST00000557311 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
ATXN3-247ENST00000557311 SNPHO15079 494 aa9.28□□□□□ -0.92
ATXN3-247ENST00000557311 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
ATXN3-247ENST00000557311 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-247ENST00000557311 TMEM121BQ9BXQ6 578 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-247ENST00000557311 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
ATXN3-247ENST00000557311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-247ENST00000557311 STK25O00506 426 aa9.25□□□□□ -0.93
ATXN3-247ENST00000557311 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-247ENST00000557311 CFTRP13569 1480 aa9.25□□□□□ -0.93
ATXN3-247ENST00000557311 POTEB3A0JP26 581 aa9.24□□□□□ -0.93
ATXN3-247ENST00000557311 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
ATXN3-247ENST00000557311 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
ATXN3-247ENST00000557311 CHGAP10645 457 aaKnown RBP9.21□□□□□ -0.94
ATXN3-247ENST00000557311 EFCAB3Q8N7B9 438 aa9.21□□□□□ -0.94
ATXN3-247ENST00000557311 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-247ENST00000557311 BOLA1Q9Y3E2 137 aa9.21□□□□□ -0.94
ATXN3-247ENST00000557311 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
ATXN3-247ENST00000557311 SPNS2Q8IVW8 549 aa9.2□□□□□ -0.94
ATXN3-247ENST00000557311 HOXB3P14651 431 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-247ENST00000557311 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
ATXN3-247ENST00000557311 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
ATXN3-247ENST00000557311 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
ATXN3-247ENST00000557311 ARHGEF11O15085 1522 aa9.17□□□□□ -0.94
ATXN3-247ENST00000557311 EMP3P54852 163 aa9.17□□□□□ -0.94
ATXN3-247ENST00000557311 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
ATXN3-247ENST00000557311 IFT140Q96RY7 1462 aa9.16□□□□□ -0.94
ATXN3-247ENST00000557311 WIZO95785 1651 aa9.16□□□□□ -0.94
ATXN3-247ENST00000557311 FAM205CA6NFA0 338 aa9.15□□□□□ -0.94
ATXN3-247ENST00000557311 HS3ST6Q96QI5 342 aa9.15□□□□□ -0.94
ATXN3-247ENST00000557311 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-247ENST00000557311 KRTAP3-3Q9BYR6 98 aa9.14□□□□□ -0.95
ATXN3-247ENST00000557311 KRTAP3-2Q9BYR7 98 aa9.14□□□□□ -0.95
ATXN3-247ENST00000557311 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-247ENST00000557311 TMEM92Q6UXU6 159 aa9.12□□□□□ -0.95
ATXN3-247ENST00000557311 MS4A4AQ96JQ5 239 aa9.12□□□□□ -0.95
ATXN3-247ENST00000557311 G3V3G9 751 aa9.11□□□□□ -0.95
ATXN3-247ENST00000557311 HS6ST3Q8IZP7 471 aa9.09□□□□□ -0.95
ATXN3-247ENST00000557311 MICALL2Q8IY33 904 aa9.08□□□□□ -0.96
ATXN3-247ENST00000557311 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
ATXN3-247ENST00000557311 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN3-247ENST00000557311 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
ATXN3-247ENST00000557311 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
ATXN3-247ENST00000557311 SOX12O15370 315 aa9.07□□□□□ -0.96
ATXN3-247ENST00000557311 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-247ENST00000557311 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
ATXN3-247ENST00000557311 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
ATXN3-247ENST00000557311 NLRP6P59044 892 aa9.05□□□□□ -0.96
ATXN3-247ENST00000557311 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-247ENST00000557311 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
ATXN3-247ENST00000557311 ZNF710Q8N1W2 664 aa9.03□□□□□ -0.96
ATXN3-247ENST00000557311 DOK7Q18PE1 504 aa9.02□□□□□ -0.97
ATXN3-247ENST00000557311 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
ATXN3-247ENST00000557311 FBXO22Q8NEZ5 403 aa8.99□□□□□ -0.97
ATXN3-247ENST00000557311 MFRPQ9BY79 579 aa8.99□□□□□ -0.97
ATXN3-247ENST00000557311 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-247ENST00000557311 ERBB3P21860 1342 aa8.99□□□□□ -0.97
ATXN3-247ENST00000557311 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
ATXN3-247ENST00000557311 SOGA1O94964 1423 aa8.98□□□□□ -0.97
ATXN3-247ENST00000557311 GPR153Q6NV75 609 aa8.98□□□□□ -0.97
ATXN3-247ENST00000557311 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
ATXN3-247ENST00000557311 VARS2Q5ST30 1063 aaKnown RBP8.96□□□□□ -0.98
ATXN3-247ENST00000557311 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.98
ATXN3-247ENST00000557311 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-247ENST00000557311 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-247ENST00000557311 RAD54L2Q9Y4B4 1467 aa8.95□□□□□ -0.98
ATXN3-247ENST00000557311 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
ATXN3-247ENST00000557311 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
ATXN3-247ENST00000557311 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-247ENST00000557311 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
ATXN3-247ENST00000557311 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
ATXN3-247ENST00000557311 KHSRPQ92945 711 aaKnown RBP eCLIP8.92□□□□□ -0.98
ATXN3-247ENST00000557311 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
ATXN3-247ENST00000557311 ZSWIM6Q9HCJ5 1215 aa8.92□□□□□ -0.98
ATXN3-247ENST00000557311 CHD1O14646 1710 aa8.91□□□□□ -0.98
ATXN3-247ENST00000557311 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-247ENST00000557311 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
ATXN3-247ENST00000557311 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
ATXN3-247ENST00000557311 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
ATXN3-247ENST00000557311 PAXIP1Q6ZW49 1069 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-247ENST00000557311 ZNF687Q8N1G0 1237 aa8.89□□□□□ -0.99
ATXN3-247ENST00000557311 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
ATXN3-247ENST00000557311 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
ATXN3-247ENST00000557311 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
ATXN3-247ENST00000557311 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
ATXN3-247ENST00000557311 KIF3CO14782 793 aa8.87□□□□□ -0.99
ATXN3-247ENST00000557311 PPP1R37O75864 691 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms