RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 SYNJ2O15056 1496 aa7.81□□□□□ -1.16
GPHN-213ENST00000556501 NUP153P49790 1475 aaKnown RBP7.81□□□□□ -1.16
GPHN-213ENST00000556501 ITSN2Q9NZM3 1697 aa7.8□□□□□ -1.16
GPHN-213ENST00000556501 RNF216Q9NWF9 866 aaPredicted RBP7.8□□□□□ -1.16
GPHN-213ENST00000556501 NUP160Q12769 1436 aa7.78□□□□□ -1.16
GPHN-213ENST00000556501 KDM5BQ9UGL1 1544 aa7.78□□□□□ -1.16
GPHN-213ENST00000556501 CROCC2H7BZ55 1655 aa7.78□□□□□ -1.16
GPHN-213ENST00000556501 ADGBQ8N7X0 1667 aa7.78□□□□□ -1.16
GPHN-213ENST00000556501 KDM6BO15054 1643 aa7.78□□□□□ -1.16
GPHN-213ENST00000556501 GTF3C3Q9Y5Q9 886 aa7.77□□□□□ -1.17
GPHN-213ENST00000556501 YTHDC1Q96MU7 727 aaKnown RBP7.76□□□□□ -1.17
GPHN-213ENST00000556501 SIN3AQ96ST3 1273 aa7.76□□□□□ -1.17
GPHN-213ENST00000556501 DENND4BO75064 1496 aaPredicted RBP7.75□□□□□ -1.17
GPHN-213ENST00000556501 ROCK1Q13464 1354 aa7.75□□□□□ -1.17
GPHN-213ENST00000556501 DAPK1P53355 1430 aa7.75□□□□□ -1.17
GPHN-213ENST00000556501 TROQ12816 1431 aaPredicted RBP7.75□□□□□ -1.17
GPHN-213ENST00000556501 ABCA8O94911 1581 aa7.75□□□□□ -1.17
GPHN-213ENST00000556501 TONSLQ96HA7 1378 aa7.74□□□□□ -1.17
GPHN-213ENST00000556501 PPP1R15AO75807 674 aaPredicted RBP7.74□□□□□ -1.17
GPHN-213ENST00000556501 PELP1Q8IZL8 1130 aaKnown RBP7.74□□□□□ -1.17
GPHN-213ENST00000556501 KIF14Q15058 1648 aa7.74□□□□□ -1.17
GPHN-213ENST00000556501 CARMIL2Q6F5E8 1435 aa7.73□□□□□ -1.17
GPHN-213ENST00000556501 CAMSAP2Q08AD1 1489 aa7.73□□□□□ -1.17
GPHN-213ENST00000556501 ABCC5O15440 1437 aa7.72□□□□□ -1.17
GPHN-213ENST00000556501 DCAF8L1A6NGE4 600 aa7.72□□□□□ -1.17
GPHN-213ENST00000556501 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
GPHN-213ENST00000556501 ADGRL2O95490 1459 aa7.71□□□□□ -1.18
GPHN-213ENST00000556501 PLB1Q6P1J6 1458 aa7.71□□□□□ -1.18
GPHN-213ENST00000556501 FKBP8Q14318 412 aa7.71□□□□□ -1.18
GPHN-213ENST00000556501 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
GPHN-213ENST00000556501 PRG4Q92954 1404 aaPredicted RBP7.69□□□□□ -1.18
GPHN-213ENST00000556501 CHD1O14646 1710 aa7.69□□□□□ -1.18
GPHN-213ENST00000556501 SHANK2Q9UPX8 1470 aa7.69□□□□□ -1.18
GPHN-213ENST00000556501 GPATCH8Q9UKJ3 1502 aaKnown RBP7.69□□□□□ -1.18
GPHN-213ENST00000556501 ATXN8OSP0DMR3 200 aa7.69□□□□□ -1.18
GPHN-213ENST00000556501 RRP7BPQ9NSQ0 103 aa7.69□□□□□ -1.18
GPHN-213ENST00000556501 ABCC10Q5T3U5 1492 aa7.68□□□□□ -1.18
GPHN-213ENST00000556501 SHROOM2Q13796 1616 aa7.68□□□□□ -1.18
GPHN-213ENST00000556501 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
GPHN-213ENST00000556501 POLR1AO95602 1720 aaPredicted RBP7.68□□□□□ -1.18
GPHN-213ENST00000556501 RPRD2Q5VT52 1461 aaKnown RBP7.68□□□□□ -1.18
GPHN-213ENST00000556501 TEX14Q8IWB6 1497 aa7.68□□□□□ -1.18
GPHN-213ENST00000556501 ARID3CA6NKF2 412 aa7.67□□□□□ -1.18
GPHN-213ENST00000556501 SLC4A2P04920 1241 aa7.67□□□□□ -1.18
GPHN-213ENST00000556501 CHIC2Q9UKJ5 165 aa7.67□□□□□ -1.18
GPHN-213ENST00000556501 PZPP20742 1482 aa7.67□□□□□ -1.18
GPHN-213ENST00000556501 ARHGEF5Q12774 1597 aa7.67□□□□□ -1.18
GPHN-213ENST00000556501 PREX2Q70Z35 1606 aa7.67□□□□□ -1.18
GPHN-213ENST00000556501 ANKRD30BQ9BXX2 1392 aa7.66□□□□□ -1.18
GPHN-213ENST00000556501 ATP10BO94823 1461 aa7.65□□□□□ -1.18
GPHN-213ENST00000556501 NCOA1Q15788 1441 aa7.65□□□□□ -1.18
GPHN-213ENST00000556501 KDM5DQ9BY66 1539 aa7.65□□□□□ -1.18
GPHN-213ENST00000556501 RNF39Q9H2S5 420 aa7.65□□□□□ -1.18
GPHN-213ENST00000556501 MBD5Q9P267 1494 aa7.64□□□□□ -1.19
GPHN-213ENST00000556501 ZNF644Q9H582 1327 aaPredicted RBP7.64□□□□□ -1.19
GPHN-213ENST00000556501 CCER2I3L3R5 266 aa7.64□□□□□ -1.19
GPHN-213ENST00000556501 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
GPHN-213ENST00000556501 DDX10Q13206 875 aaKnown RBP7.64□□□□□ -1.19
GPHN-213ENST00000556501 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
GPHN-213ENST00000556501 JPH4Q96JJ6 628 aa7.64□□□□□ -1.19
GPHN-213ENST00000556501 MPHOSPH9Q99550 1183 aa7.64□□□□□ -1.19
GPHN-213ENST00000556501 ANKRD30AQ9BXX3 1397 aa7.62□□□□□ -1.19
GPHN-213ENST00000556501 CDC42BPBQ9Y5S2 1711 aa7.62□□□□□ -1.19
GPHN-213ENST00000556501 CFDP1Q9UEE9 299 aaPredicted RBP7.62□□□□□ -1.19
GPHN-213ENST00000556501 SAMD9LQ8IVG5 1584 aa7.62□□□□□ -1.19
GPHN-213ENST00000556501 MAST1Q9Y2H9 1570 aa7.62□□□□□ -1.19
GPHN-213ENST00000556501 C9orf84Q5VXU9 1444 aa7.61□□□□□ -1.19
GPHN-213ENST00000556501 KIAA1107Q9UPP5 1409 aa7.61□□□□□ -1.19
GPHN-213ENST00000556501 MYCNP04198 464 aaPredicted RBP7.61□□□□□ -1.19
GPHN-213ENST00000556501 FBLN2P98095 1184 aa7.61□□□□□ -1.19
GPHN-213ENST00000556501 TTC37Q6PGP7 1564 aa7.6□□□□□ -1.19
GPHN-213ENST00000556501 ABCC2Q92887 1545 aa7.6□□□□□ -1.19
GPHN-213ENST00000556501 ARHGEF12Q9NZN5 1544 aa7.6□□□□□ -1.19
GPHN-213ENST00000556501 MYO5CQ9NQX4 1742 aa7.6□□□□□ -1.19
GPHN-213ENST00000556501 PTPRGP23470 1445 aa7.6□□□□□ -1.19
GPHN-213ENST00000556501 CNTLNQ9NXG0 1405 aa7.6□□□□□ -1.19
GPHN-213ENST00000556501 ANKRD50Q9ULJ7 1429 aa7.6□□□□□ -1.19
GPHN-213ENST00000556501 ANP32CO43423 234 aa7.59□□□□□ -1.19
GPHN-213ENST00000556501 HSPA5P11021 654 aaKnown RBP7.59□□□□□ -1.19
GPHN-213ENST00000556501 L3MBTL2Q969R5 705 aa7.59□□□□□ -1.19
GPHN-213ENST00000556501 KCNH8Q96L42 1107 aa7.59□□□□□ -1.19
GPHN-213ENST00000556501 HIRIP3Q9BW71 556 aaPredicted RBP7.59□□□□□ -1.19
GPHN-213ENST00000556501 CCDC141Q6ZP82 1450 aa7.59□□□□□ -1.19
GPHN-213ENST00000556501 UNC13BO14795 1591 aa7.59□□□□□ -1.2
GPHN-213ENST00000556501 PLXNC1O60486 1568 aa7.59□□□□□ -1.2
GPHN-213ENST00000556501 CLASP1Q7Z460 1538 aa7.58□□□□□ -1.2
GPHN-213ENST00000556501 PLEKHD1A6NEE1 506 aa7.58□□□□□ -1.2
GPHN-213ENST00000556501 EIF4G2P78344 907 aaKnown RBP eCLIP7.58□□□□□ -1.2
GPHN-213ENST00000556501 SPATA31E1Q6ZUB1 1445 aa7.58□□□□□ -1.2
GPHN-213ENST00000556501 WASHC2AQ641Q2 1341 aa7.57□□□□□ -1.2
GPHN-213ENST00000556501 SUPT16HQ9Y5B9 1047 aaKnown RBP7.57□□□□□ -1.2
GPHN-213ENST00000556501 KDM5CP41229 1560 aa7.57□□□□□ -1.2
GPHN-213ENST00000556501 CCDC7Q96M83 1385 aa7.57□□□□□ -1.2
GPHN-213ENST00000556501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.57□□□□□ -1.2
GPHN-213ENST00000556501 ERCC6L2Q5T890 1561 aa7.56□□□□□ -1.2
GPHN-213ENST00000556501 UHRF1BP1Q6BDS2 1440 aa7.56□□□□□ -1.2
GPHN-213ENST00000556501 SYCP2Q9BX26 1530 aa7.56□□□□□ -1.2
GPHN-213ENST00000556501 KIF15Q9NS87 1388 aa7.56□□□□□ -1.2
GPHN-213ENST00000556501 ZCCHC11Q5TAX3 1644 aaKnown RBP7.56□□□□□ -1.2
GPHN-213ENST00000556501 RALGAPBQ86X10 1494 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms