RNA–Protein interactions for RNA: ENST00000556143.5

ZFYVE1-208, Transcript of zinc finger FYVE-type containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFYVE1, Length 4,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-208ENST00000556143 CC2D1BQ5T0F9 858 aaKnown RBP13.61□□□□□ -0.23
ZFYVE1-208ENST00000556143 RAB3GAP2Q9H2M9 1393 aa13.6□□□□□ -0.23
ZFYVE1-208ENST00000556143 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
ZFYVE1-208ENST00000556143 EIF3AQ14152 1382 aaKnown RBP13.6□□□□□ -0.23
ZFYVE1-208ENST00000556143 GAPVD1Q14C86 1478 aa13.59□□□□□ -0.23
ZFYVE1-208ENST00000556143 STK26Q9P289 416 aa13.59□□□□□ -0.23
ZFYVE1-208ENST00000556143 BECN1Q14457 450 aa13.58□□□□□ -0.24
ZFYVE1-208ENST00000556143 CASC1Q6TDU7 716 aa13.58□□□□□ -0.24
ZFYVE1-208ENST00000556143 SAFB2Q14151 953 aaKnown RBP eCLIP13.57□□□□□ -0.24
ZFYVE1-208ENST00000556143 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
ZFYVE1-208ENST00000556143 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
ZFYVE1-208ENST00000556143 CHMP4AQ9BY43 222 aa13.57□□□□□ -0.24
ZFYVE1-208ENST00000556143 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
ZFYVE1-208ENST00000556143 CCER2I3L3R5 266 aa13.56□□□□□ -0.24
ZFYVE1-208ENST00000556143 FGD5Q6ZNL6 1462 aa13.56□□□□□ -0.24
ZFYVE1-208ENST00000556143 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
ZFYVE1-208ENST00000556143 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
ZFYVE1-208ENST00000556143 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
ZFYVE1-208ENST00000556143 IGF1RP08069 1367 aa13.54□□□□□ -0.24
ZFYVE1-208ENST00000556143 TERF2IPQ9NYB0 399 aa13.54□□□□□ -0.24
ZFYVE1-208ENST00000556143 CALD1Q05682 793 aaKnown RBP13.53□□□□□ -0.24
ZFYVE1-208ENST00000556143 FOXD1Q16676 465 aa13.53□□□□□ -0.24
ZFYVE1-208ENST00000556143 NPHP1O15259 732 aa13.53□□□□□ -0.24
ZFYVE1-208ENST00000556143 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
ZFYVE1-208ENST00000556143 RALBP1Q15311 655 aa13.52□□□□□ -0.25
ZFYVE1-208ENST00000556143 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
ZFYVE1-208ENST00000556143 SOX12O15370 315 aa13.51□□□□□ -0.25
ZFYVE1-208ENST00000556143 UACAQ9BZF9 1416 aa13.5□□□□□ -0.25
ZFYVE1-208ENST00000556143 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
ZFYVE1-208ENST00000556143 NCLP19338 710 aaKnown RBP13.49□□□□□ -0.25
ZFYVE1-208ENST00000556143 NBR1Q14596 966 aa13.49□□□□□ -0.25
ZFYVE1-208ENST00000556143 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
ZFYVE1-208ENST00000556143 L3MBTL2Q969R5 705 aa13.48□□□□□ -0.25
ZFYVE1-208ENST00000556143 PPP4R2Q9NY27 417 aa13.48□□□□□ -0.25
ZFYVE1-208ENST00000556143 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
ZFYVE1-208ENST00000556143 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
ZFYVE1-208ENST00000556143 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
ZFYVE1-208ENST00000556143 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
ZFYVE1-208ENST00000556143 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
ZFYVE1-208ENST00000556143 CSB-PGBD3P0DP91 1061 aa13.45□□□□□ -0.26
ZFYVE1-208ENST00000556143 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
ZFYVE1-208ENST00000556143 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
ZFYVE1-208ENST00000556143 RAD54L2Q9Y4B4 1467 aa13.45□□□□□ -0.26
ZFYVE1-208ENST00000556143 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
ZFYVE1-208ENST00000556143 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
ZFYVE1-208ENST00000556143 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
ZFYVE1-208ENST00000556143 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
ZFYVE1-208ENST00000556143 MYOM3Q5VTT5 1437 aa13.44□□□□□ -0.26
ZFYVE1-208ENST00000556143 SENP3-EIF4A1A0A087X0R7 540 aa13.44□□□□□ -0.26
ZFYVE1-208ENST00000556143 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
ZFYVE1-208ENST00000556143 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
ZFYVE1-208ENST00000556143 CFTRP13569 1480 aa13.42□□□□□ -0.26
ZFYVE1-208ENST00000556143 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
ZFYVE1-208ENST00000556143 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
ZFYVE1-208ENST00000556143 CDK11BP21127 795 aaKnown RBP13.41□□□□□ -0.26
ZFYVE1-208ENST00000556143 HDAC5Q9UQL6 1122 aa13.41□□□□□ -0.26
ZFYVE1-208ENST00000556143 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
ZFYVE1-208ENST00000556143 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
ZFYVE1-208ENST00000556143 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
ZFYVE1-208ENST00000556143 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
ZFYVE1-208ENST00000556143 LMOD3Q0VAK6 560 aa13.39□□□□□ -0.27
ZFYVE1-208ENST00000556143 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
ZFYVE1-208ENST00000556143 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
ZFYVE1-208ENST00000556143 RGS3P49796 1198 aa13.37□□□□□ -0.27
ZFYVE1-208ENST00000556143 KCNJ4P48050 445 aa13.37□□□□□ -0.27
ZFYVE1-208ENST00000556143 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
ZFYVE1-208ENST00000556143 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
ZFYVE1-208ENST00000556143 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
ZFYVE1-208ENST00000556143 FGD1P98174 961 aa13.36□□□□□ -0.27
ZFYVE1-208ENST00000556143 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
ZFYVE1-208ENST00000556143 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
ZFYVE1-208ENST00000556143 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
ZFYVE1-208ENST00000556143 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
ZFYVE1-208ENST00000556143 AMPHP49418 695 aa13.35□□□□□ -0.27
ZFYVE1-208ENST00000556143 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
ZFYVE1-208ENST00000556143 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
ZFYVE1-208ENST00000556143 CUX1P39880 1505 aa13.35□□□□□ -0.27
ZFYVE1-208ENST00000556143 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.27
ZFYVE1-208ENST00000556143 PDE3BQ13370 1112 aa13.33□□□□□ -0.28
ZFYVE1-208ENST00000556143 KIF15Q9NS87 1388 aa13.32□□□□□ -0.28
ZFYVE1-208ENST00000556143 MCCP23508 829 aa13.31□□□□□ -0.28
ZFYVE1-208ENST00000556143 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
ZFYVE1-208ENST00000556143 FGD6Q6ZV73 1430 aa13.31□□□□□ -0.28
ZFYVE1-208ENST00000556143 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
ZFYVE1-208ENST00000556143 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
ZFYVE1-208ENST00000556143 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
ZFYVE1-208ENST00000556143 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
ZFYVE1-208ENST00000556143 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
ZFYVE1-208ENST00000556143 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
ZFYVE1-208ENST00000556143 CGNL1Q0VF96 1302 aa13.29□□□□□ -0.28
ZFYVE1-208ENST00000556143 DEKP35659 375 aaKnown RBP13.29□□□□□ -0.28
ZFYVE1-208ENST00000556143 COG3Q96JB2 828 aa13.29□□□□□ -0.28
ZFYVE1-208ENST00000556143 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
ZFYVE1-208ENST00000556143 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
ZFYVE1-208ENST00000556143 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
ZFYVE1-208ENST00000556143 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
ZFYVE1-208ENST00000556143 AEBP2Q6ZN18 517 aaPredicted RBP13.27□□□□□ -0.28
ZFYVE1-208ENST00000556143 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.28
ZFYVE1-208ENST00000556143 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.28
ZFYVE1-208ENST00000556143 HMMRO75330 724 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms