RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 ARHGEF11O15085 1522 aa12.92□□□□□ -0.34
SUPT16H-204ENST00000555943 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
SUPT16H-204ENST00000555943 MS4A3Q96HJ5 214 aa12.9□□□□□ -0.34
SUPT16H-204ENST00000555943 HAX1O00165 279 aa12.89□□□□□ -0.35
SUPT16H-204ENST00000555943 SOGA1O94964 1423 aa12.88□□□□□ -0.35
SUPT16H-204ENST00000555943 AQRO60306 1485 aaKnown RBP eCLIP12.88□□□□□ -0.35
SUPT16H-204ENST00000555943 CHD1O14646 1710 aa12.87□□□□□ -0.35
SUPT16H-204ENST00000555943 EVX2Q03828 476 aa12.86□□□□□ -0.35
SUPT16H-204ENST00000555943 RYDENQ9NUL5 291 aaKnown RBP12.86□□□□□ -0.35
SUPT16H-204ENST00000555943 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
SUPT16H-204ENST00000555943 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
SUPT16H-204ENST00000555943 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
SUPT16H-204ENST00000555943 CUX1P39880 1505 aa12.84□□□□□ -0.35
SUPT16H-204ENST00000555943 RAD54L2Q9Y4B4 1467 aa12.84□□□□□ -0.35
SUPT16H-204ENST00000555943 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
SUPT16H-204ENST00000555943 MFRPQ9BY79 579 aa12.82□□□□□ -0.36
SUPT16H-204ENST00000555943 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-204ENST00000555943 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
SUPT16H-204ENST00000555943 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
SUPT16H-204ENST00000555943 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
SUPT16H-204ENST00000555943 GRIN2BQ13224 1484 aa12.79□□□□□ -0.36
SUPT16H-204ENST00000555943 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
SUPT16H-204ENST00000555943 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
SUPT16H-204ENST00000555943 GALR2O43603 387 aaPredicted RBP12.77□□□□□ -0.37
SUPT16H-204ENST00000555943 ARAP1Q96P48 1450 aa12.77□□□□□ -0.37
SUPT16H-204ENST00000555943 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
SUPT16H-204ENST00000555943 SYNJ2O15056 1496 aa12.75□□□□□ -0.37
SUPT16H-204ENST00000555943 SOX12O15370 315 aa12.75□□□□□ -0.37
SUPT16H-204ENST00000555943 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
SUPT16H-204ENST00000555943 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
SUPT16H-204ENST00000555943 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SUPT16H-204ENST00000555943 PBRM1Q86U86 1689 aa12.74□□□□□ -0.37
SUPT16H-204ENST00000555943 GAPVD1Q14C86 1478 aa12.74□□□□□ -0.37
SUPT16H-204ENST00000555943 TIE1P35590 1138 aa12.74□□□□□ -0.37
SUPT16H-204ENST00000555943 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
SUPT16H-204ENST00000555943 NLRP6P59044 892 aa12.73□□□□□ -0.37
SUPT16H-204ENST00000555943 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
SUPT16H-204ENST00000555943 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
SUPT16H-204ENST00000555943 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
SUPT16H-204ENST00000555943 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
SUPT16H-204ENST00000555943 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
SUPT16H-204ENST00000555943 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
SUPT16H-204ENST00000555943 CLCN6P51797 869 aa12.7□□□□□ -0.38
SUPT16H-204ENST00000555943 GOLGA2Q08379 1002 aa12.7□□□□□ -0.38
SUPT16H-204ENST00000555943 PPP1R37O75864 691 aa12.69□□□□□ -0.38
SUPT16H-204ENST00000555943 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-204ENST00000555943 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
SUPT16H-204ENST00000555943 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
SUPT16H-204ENST00000555943 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
SUPT16H-204ENST00000555943 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
SUPT16H-204ENST00000555943 ADAMTS12P58397 1594 aa12.61□□□□□ -0.39
SUPT16H-204ENST00000555943 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
SUPT16H-204ENST00000555943 BCANQ96GW7 911 aa12.61□□□□□ -0.39
SUPT16H-204ENST00000555943 GABBR2O75899 941 aa12.6□□□□□ -0.39
SUPT16H-204ENST00000555943 FHAD1B1AJZ9 1412 aa12.6□□□□□ -0.39
SUPT16H-204ENST00000555943 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
SUPT16H-204ENST00000555943 NUP160Q12769 1436 aa12.57□□□□□ -0.4
SUPT16H-204ENST00000555943 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
SUPT16H-204ENST00000555943 ASTLQ6HA08 431 aaPredicted RBP12.56□□□□□ -0.4
SUPT16H-204ENST00000555943 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
SUPT16H-204ENST00000555943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
SUPT16H-204ENST00000555943 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
SUPT16H-204ENST00000555943 SHROOM2Q13796 1616 aa12.53□□□□□ -0.4
SUPT16H-204ENST00000555943 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
SUPT16H-204ENST00000555943 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
SUPT16H-204ENST00000555943 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
SUPT16H-204ENST00000555943 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
SUPT16H-204ENST00000555943 EEA1Q15075 1411 aa12.46□□□□□ -0.41
SUPT16H-204ENST00000555943 IRX5P78411 483 aaPredicted RBP12.46□□□□□ -0.41
SUPT16H-204ENST00000555943 IER5LQ5T953 404 aa12.46□□□□□ -0.41
SUPT16H-204ENST00000555943 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
SUPT16H-204ENST00000555943 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
SUPT16H-204ENST00000555943 ERCC6L2Q5T890 1561 aa12.46□□□□□ -0.42
SUPT16H-204ENST00000555943 CUL7Q14999 1698 aa12.45□□□□□ -0.42
SUPT16H-204ENST00000555943 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
SUPT16H-204ENST00000555943 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
SUPT16H-204ENST00000555943 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
SUPT16H-204ENST00000555943 JPH4Q96JJ6 628 aa12.43□□□□□ -0.42
SUPT16H-204ENST00000555943 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
SUPT16H-204ENST00000555943 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-204ENST00000555943 IGF1RP08069 1367 aa12.42□□□□□ -0.42
SUPT16H-204ENST00000555943 NBR1Q14596 966 aa12.41□□□□□ -0.42
SUPT16H-204ENST00000555943 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-204ENST00000555943 CRISPLD2Q9H0B8 497 aa12.4□□□□□ -0.42
SUPT16H-204ENST00000555943 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
SUPT16H-204ENST00000555943 PDE4AP27815 886 aa12.39□□□□□ -0.43
SUPT16H-204ENST00000555943 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
SUPT16H-204ENST00000555943 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
SUPT16H-204ENST00000555943 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
SUPT16H-204ENST00000555943 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
SUPT16H-204ENST00000555943 PLCG2P16885 1265 aa12.37□□□□□ -0.43
SUPT16H-204ENST00000555943 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
SUPT16H-204ENST00000555943 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
SUPT16H-204ENST00000555943 MFSD10Q14728 455 aa12.35□□□□□ -0.43
SUPT16H-204ENST00000555943 COLQQ9Y215 455 aaPredicted RBP12.35□□□□□ -0.43
SUPT16H-204ENST00000555943 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
SUPT16H-204ENST00000555943 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
SUPT16H-204ENST00000555943 SEC24BO95487 1268 aa12.32□□□□□ -0.44
SUPT16H-204ENST00000555943 E2F4Q16254 413 aa12.32□□□□□ -0.44
SUPT16H-204ENST00000555943 DDX27Q96GQ7 796 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms