RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 DMRT2Q9Y5R5 561 aa24.46■■□□□ 1.51
TUBB3-210ENST00000555810 ZMYM4Q5VZL5 1548 aa24.45■■□□□ 1.5
TUBB3-210ENST00000555810 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.5
TUBB3-210ENST00000555810 HECW1Q76N89 1606 aa24.43■■□□□ 1.5
TUBB3-210ENST00000555810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.4■■□□□ 1.5
TUBB3-210ENST00000555810 MAGI2Q86UL8 1455 aa24.38■■□□□ 1.49
TUBB3-210ENST00000555810 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
TUBB3-210ENST00000555810 SCAPERQ9BY12 1400 aa24.35■■□□□ 1.49
TUBB3-210ENST00000555810 UHRF1BP1Q6BDS2 1440 aa24.33■■□□□ 1.49
TUBB3-210ENST00000555810 ATP10AO60312 1499 aa24.32■■□□□ 1.48
TUBB3-210ENST00000555810 SETD1BQ9UPS6 1966 aaKnown RBP24.31■■□□□ 1.48
TUBB3-210ENST00000555810 C9orf84Q5VXU9 1444 aa24.29■■□□□ 1.48
TUBB3-210ENST00000555810 PTPRTO14522 1441 aa24.25■■□□□ 1.47
TUBB3-210ENST00000555810 MYT1LQ9UL68 1186 aa24.24■■□□□ 1.47
TUBB3-210ENST00000555810 LTBP4Q8N2S1 1624 aa24.23■■□□□ 1.47
TUBB3-210ENST00000555810 PLCH2O75038 1416 aa24.22■■□□□ 1.47
TUBB3-210ENST00000555810 CSRNP3Q8WYN3 585 aa24.2■■□□□ 1.46
TUBB3-210ENST00000555810 CDK13Q14004 1512 aaKnown RBP24.19■■□□□ 1.46
TUBB3-210ENST00000555810 C3P01024 1663 aa24.18■■□□□ 1.46
TUBB3-210ENST00000555810 EFCAB2Q5VUJ9 269 aa24.17■■□□□ 1.46
TUBB3-210ENST00000555810 AFAP1Q8N556 730 aa24.15■■□□□ 1.46
TUBB3-210ENST00000555810 ESF1Q9H501 851 aaKnown RBP24.15■■□□□ 1.46
TUBB3-210ENST00000555810 MYO5CQ9NQX4 1742 aa24.15■■□□□ 1.46
TUBB3-210ENST00000555810 IQSEC2Q5JU85 1478 aa24.14■■□□□ 1.46
TUBB3-210ENST00000555810 ATP1B4Q9UN42 357 aaPredicted RBP24.13■■□□□ 1.45
TUBB3-210ENST00000555810 UBAP1LF5GYI3 381 aa24.12■■□□□ 1.45
TUBB3-210ENST00000555810 ZNF518AQ6AHZ1 1483 aa24.09■■□□□ 1.45
TUBB3-210ENST00000555810 NCOA1Q15788 1441 aa24.08■■□□□ 1.44
TUBB3-210ENST00000555810 DIP2CQ9Y2E4 1556 aa24.08■■□□□ 1.44
TUBB3-210ENST00000555810 EEA1Q15075 1411 aa24.07■■□□□ 1.44
TUBB3-210ENST00000555810 TRAPPC8Q9Y2L5 1435 aa24.07■■□□□ 1.44
TUBB3-210ENST00000555810 ZNF335Q9H4Z2 1342 aaPredicted RBP24.05■■□□□ 1.44
TUBB3-210ENST00000555810 NCKAP5LQ9HCH0 1330 aa24.04■■□□□ 1.44
TUBB3-210ENST00000555810 ARHGAP5Q13017 1502 aa24.04■■□□□ 1.44
TUBB3-210ENST00000555810 KDM5CP41229 1560 aa24.03■■□□□ 1.44
TUBB3-210ENST00000555810 CAMSAP1Q5T5Y3 1602 aa24.03■■□□□ 1.44
TUBB3-210ENST00000555810 KIF14Q15058 1648 aa24.02■■□□□ 1.44
TUBB3-210ENST00000555810 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
TUBB3-210ENST00000555810 REREQ9P2R6 1566 aa23.99■■□□□ 1.43
TUBB3-210ENST00000555810 SCAF1Q9H7N4 1312 aaKnown RBP23.97■■□□□ 1.43
TUBB3-210ENST00000555810 CDK11AQ9UQ88 783 aaPredicted RBP23.97■■□□□ 1.43
TUBB3-210ENST00000555810 AGLP35573 1532 aa23.94■■□□□ 1.42
TUBB3-210ENST00000555810 MLH3Q9UHC1 1453 aa23.93■■□□□ 1.42
TUBB3-210ENST00000555810 SUPT6HQ7KZ85 1726 aaKnown RBP23.92■■□□□ 1.42
TUBB3-210ENST00000555810 CDC42BPBQ9Y5S2 1711 aa23.92■■□□□ 1.42
TUBB3-210ENST00000555810 CNTLNQ9NXG0 1405 aa23.92■■□□□ 1.42
TUBB3-210ENST00000555810 MED1Q15648 1581 aaPredicted RBP23.91■■□□□ 1.42
TUBB3-210ENST00000555810 HSPA1LP34931 641 aa23.91■■□□□ 1.42
TUBB3-210ENST00000555810 PIP4K2BP78356 416 aa23.91■■□□□ 1.42
TUBB3-210ENST00000555810 EHMT2Q96KQ7 1210 aa23.89■■□□□ 1.41
TUBB3-210ENST00000555810 TROQ12816 1431 aaPredicted RBP23.87■■□□□ 1.41
TUBB3-210ENST00000555810 FMN1Q68DA7 1419 aa23.87■■□□□ 1.41
TUBB3-210ENST00000555810 ZMYM3Q14202 1370 aa23.87■■□□□ 1.41
TUBB3-210ENST00000555810 NPATQ14207 1427 aa23.86■■□□□ 1.41
TUBB3-210ENST00000555810 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
TUBB3-210ENST00000555810 CLIP1P30622 1438 aa23.85■■□□□ 1.41
TUBB3-210ENST00000555810 PKD2Q13563 968 aa23.85■■□□□ 1.41
TUBB3-210ENST00000555810 MROH2AA6NES4 1674 aa23.85■■□□□ 1.41
TUBB3-210ENST00000555810 ITSN2Q9NZM3 1697 aa23.85■■□□□ 1.41
TUBB3-210ENST00000555810 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
TUBB3-210ENST00000555810 PPP6R1Q9UPN7 881 aa23.82■■□□□ 1.4
TUBB3-210ENST00000555810 ABCC1P33527 1531 aa23.82■■□□□ 1.4
TUBB3-210ENST00000555810 CLTCQ00610 1675 aaKnown RBP23.81■■□□□ 1.4
TUBB3-210ENST00000555810 MYO3AQ8NEV4 1616 aa23.81■■□□□ 1.4
TUBB3-210ENST00000555810 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
TUBB3-210ENST00000555810 PREX2Q70Z35 1606 aa23.79■■□□□ 1.4
TUBB3-210ENST00000555810 PLA2R1Q13018 1463 aa23.78■■□□□ 1.4
TUBB3-210ENST00000555810 ZNF142P52746 1687 aaPredicted RBP23.78■■□□□ 1.4
TUBB3-210ENST00000555810 TOM1O60784 492 aa23.77■■□□□ 1.4
TUBB3-210ENST00000555810 CEP170BQ9Y4F5 1589 aaPredicted RBP23.77■■□□□ 1.4
TUBB3-210ENST00000555810 TCOF1Q13428 1488 aaKnown RBP23.76■■□□□ 1.39
TUBB3-210ENST00000555810 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
TUBB3-210ENST00000555810 ZNF777Q9ULD5 760 aaPredicted RBP23.75■■□□□ 1.39
TUBB3-210ENST00000555810 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
TUBB3-210ENST00000555810 ARHGAP35Q9NRY4 1499 aa23.74■■□□□ 1.39
TUBB3-210ENST00000555810 SAMD9LQ8IVG5 1584 aa23.71■■□□□ 1.39
TUBB3-210ENST00000555810 GGT6Q6P531 493 aa23.71■■□□□ 1.39
TUBB3-210ENST00000555810 CDC42BPAQ5VT25 1732 aa23.7■■□□□ 1.39
TUBB3-210ENST00000555810 PTPRKQ15262 1439 aa23.7■■□□□ 1.38
TUBB3-210ENST00000555810 SPAG9O60271 1321 aaKnown RBP23.69■■□□□ 1.38
TUBB3-210ENST00000555810 HNRNPMP52272 730 aaKnown RBP eCLIP23.67■■□□□ 1.38
TUBB3-210ENST00000555810 CPS1P31327 1500 aa23.64■■□□□ 1.38
TUBB3-210ENST00000555810 DNMT1P26358 1616 aaKnown RBP23.64■■□□□ 1.38
TUBB3-210ENST00000555810 SYCP2Q9BX26 1530 aa23.64■■□□□ 1.37
TUBB3-210ENST00000555810 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
TUBB3-210ENST00000555810 POLR1AO95602 1720 aaPredicted RBP23.63■■□□□ 1.37
TUBB3-210ENST00000555810 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
TUBB3-210ENST00000555810 A2ML1A8K2U0 1454 aa23.62■■□□□ 1.37
TUBB3-210ENST00000555810 A2MP01023 1474 aa23.61■■□□□ 1.37
TUBB3-210ENST00000555810 ATP7AQ04656 1500 aa23.6■■□□□ 1.37
TUBB3-210ENST00000555810 PLXNC1O60486 1568 aa23.57■■□□□ 1.36
TUBB3-210ENST00000555810 NEURL4Q96JN8 1562 aa23.57■■□□□ 1.36
TUBB3-210ENST00000555810 ALKQ9UM73 1620 aa23.54■■□□□ 1.36
TUBB3-210ENST00000555810 INO80Q9ULG1 1556 aaPredicted RBP23.53■■□□□ 1.36
TUBB3-210ENST00000555810 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
TUBB3-210ENST00000555810 FBXO31Q5XUX0 539 aaPredicted RBP23.53■■□□□ 1.36
TUBB3-210ENST00000555810 ANKLE2Q86XL3 938 aa23.52■■□□□ 1.36
TUBB3-210ENST00000555810 VWDEQ8N2E2 1590 aa23.51■■□□□ 1.35
TUBB3-210ENST00000555810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.51■■□□□ 1.35
TUBB3-210ENST00000555810 GPATCH8Q9UKJ3 1502 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms