RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 MLECQ14165 292 aa18.96■□□□□ 0.63
MTHFD1-211ENST00000555709 PTPRTO14522 1441 aa18.96■□□□□ 0.63
MTHFD1-211ENST00000555709 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
MTHFD1-211ENST00000555709 MAGI2Q86UL8 1455 aa18.94■□□□□ 0.62
MTHFD1-211ENST00000555709 CEBPAP49715 358 aaPredicted RBP18.93■□□□□ 0.62
MTHFD1-211ENST00000555709 HECW1Q76N89 1606 aa18.9■□□□□ 0.62
MTHFD1-211ENST00000555709 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
MTHFD1-211ENST00000555709 CFAP74Q9C0B2 1584 aa18.89■□□□□ 0.62
MTHFD1-211ENST00000555709 UHRF1BP1Q6BDS2 1440 aa18.89■□□□□ 0.61
MTHFD1-211ENST00000555709 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.61
MTHFD1-211ENST00000555709 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
MTHFD1-211ENST00000555709 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
MTHFD1-211ENST00000555709 SAMD9Q5K651 1589 aa18.88■□□□□ 0.61
MTHFD1-211ENST00000555709 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
MTHFD1-211ENST00000555709 CLIP1P30622 1438 aa18.84■□□□□ 0.61
MTHFD1-211ENST00000555709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.61
MTHFD1-211ENST00000555709 ATP10AO60312 1499 aa18.84■□□□□ 0.61
MTHFD1-211ENST00000555709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
MTHFD1-211ENST00000555709 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.6
MTHFD1-211ENST00000555709 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.6
MTHFD1-211ENST00000555709 C9orf84Q5VXU9 1444 aa18.82■□□□□ 0.6
MTHFD1-211ENST00000555709 NCOA1Q15788 1441 aa18.78■□□□□ 0.6
MTHFD1-211ENST00000555709 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
MTHFD1-211ENST00000555709 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
MTHFD1-211ENST00000555709 MED1Q15648 1581 aaPredicted RBP18.75■□□□□ 0.59
MTHFD1-211ENST00000555709 C3P01024 1663 aa18.74■□□□□ 0.59
MTHFD1-211ENST00000555709 UBAP1LF5GYI3 381 aa18.74■□□□□ 0.59
MTHFD1-211ENST00000555709 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
MTHFD1-211ENST00000555709 PLCH2O75038 1416 aa18.7■□□□□ 0.58
MTHFD1-211ENST00000555709 TRAPPC8Q9Y2L5 1435 aa18.7■□□□□ 0.58
MTHFD1-211ENST00000555709 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
MTHFD1-211ENST00000555709 REREQ9P2R6 1566 aa18.66■□□□□ 0.58
MTHFD1-211ENST00000555709 CAMSAP1Q5T5Y3 1602 aa18.65■□□□□ 0.58
MTHFD1-211ENST00000555709 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
MTHFD1-211ENST00000555709 HSPA1LP34931 641 aa18.64■□□□□ 0.57
MTHFD1-211ENST00000555709 KDM5CP41229 1560 aa18.64■□□□□ 0.57
MTHFD1-211ENST00000555709 DIP2CQ9Y2E4 1556 aa18.64■□□□□ 0.57
MTHFD1-211ENST00000555709 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
MTHFD1-211ENST00000555709 ZNF518AQ6AHZ1 1483 aa18.61■□□□□ 0.57
MTHFD1-211ENST00000555709 AGLP35573 1532 aa18.6■□□□□ 0.57
MTHFD1-211ENST00000555709 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
MTHFD1-211ENST00000555709 EFCAB2Q5VUJ9 269 aa18.59■□□□□ 0.57
MTHFD1-211ENST00000555709 AFAP1Q8N556 730 aa18.58■□□□□ 0.56
MTHFD1-211ENST00000555709 ABCA6Q8N139 1617 aa18.57■□□□□ 0.56
MTHFD1-211ENST00000555709 MYO5CQ9NQX4 1742 aa18.56■□□□□ 0.56
MTHFD1-211ENST00000555709 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
MTHFD1-211ENST00000555709 NPATQ14207 1427 aa18.56■□□□□ 0.56
MTHFD1-211ENST00000555709 CASKIN1Q8WXD9 1431 aa18.56■□□□□ 0.56
MTHFD1-211ENST00000555709 CDK13Q14004 1512 aaKnown RBP18.55■□□□□ 0.56
MTHFD1-211ENST00000555709 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
MTHFD1-211ENST00000555709 PLA2R1Q13018 1463 aa18.54■□□□□ 0.56
MTHFD1-211ENST00000555709 TCOF1Q13428 1488 aaKnown RBP18.53■□□□□ 0.56
MTHFD1-211ENST00000555709 MLH3Q9UHC1 1453 aa18.53■□□□□ 0.56
MTHFD1-211ENST00000555709 ESF1Q9H501 851 aaKnown RBP18.52■□□□□ 0.56
MTHFD1-211ENST00000555709 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
MTHFD1-211ENST00000555709 PKD2Q13563 968 aa18.51■□□□□ 0.55
MTHFD1-211ENST00000555709 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
MTHFD1-211ENST00000555709 PIP4K2BP78356 416 aa18.5■□□□□ 0.55
MTHFD1-211ENST00000555709 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
MTHFD1-211ENST00000555709 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
MTHFD1-211ENST00000555709 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
MTHFD1-211ENST00000555709 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
MTHFD1-211ENST00000555709 KIF14Q15058 1648 aa18.46■□□□□ 0.55
MTHFD1-211ENST00000555709 MYO3AQ8NEV4 1616 aa18.46■□□□□ 0.55
MTHFD1-211ENST00000555709 TOM1O60784 492 aa18.46■□□□□ 0.55
MTHFD1-211ENST00000555709 MYT1LQ9UL68 1186 aa18.46■□□□□ 0.55
MTHFD1-211ENST00000555709 ARHGAP5Q13017 1502 aa18.45■□□□□ 0.54
MTHFD1-211ENST00000555709 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
MTHFD1-211ENST00000555709 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
MTHFD1-211ENST00000555709 CEP170BQ9Y4F5 1589 aaPredicted RBP18.44■□□□□ 0.54
MTHFD1-211ENST00000555709 MAP3K1Q13233 1512 aa18.44■□□□□ 0.54
MTHFD1-211ENST00000555709 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
MTHFD1-211ENST00000555709 CCDC18Q5T9S5 1454 aa18.43■□□□□ 0.54
MTHFD1-211ENST00000555709 CPS1P31327 1500 aa18.43■□□□□ 0.54
MTHFD1-211ENST00000555709 KIDINS220Q9ULH0 1771 aa18.42■□□□□ 0.54
MTHFD1-211ENST00000555709 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
MTHFD1-211ENST00000555709 RGS17Q9UGC6 210 aaPredicted RBP18.4■□□□□ 0.54
MTHFD1-211ENST00000555709 PTPRKQ15262 1439 aa18.39■□□□□ 0.53
MTHFD1-211ENST00000555709 ABCC1P33527 1531 aa18.39■□□□□ 0.53
MTHFD1-211ENST00000555709 CDC42BPBQ9Y5S2 1711 aa18.38■□□□□ 0.53
MTHFD1-211ENST00000555709 SHANK2Q9UPX8 1470 aa18.38■□□□□ 0.53
MTHFD1-211ENST00000555709 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
MTHFD1-211ENST00000555709 ITSN2Q9NZM3 1697 aa18.36■□□□□ 0.53
MTHFD1-211ENST00000555709 CLTCQ00610 1675 aaKnown RBP18.35■□□□□ 0.53
MTHFD1-211ENST00000555709 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
MTHFD1-211ENST00000555709 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
MTHFD1-211ENST00000555709 DNMT1P26358 1616 aaKnown RBP18.32■□□□□ 0.52
MTHFD1-211ENST00000555709 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
MTHFD1-211ENST00000555709 VWDEQ8N2E2 1590 aa18.31■□□□□ 0.52
MTHFD1-211ENST00000555709 A2ML1A8K2U0 1454 aa18.31■□□□□ 0.52
MTHFD1-211ENST00000555709 LRRC9Q6ZRR7 1453 aa18.31■□□□□ 0.52
MTHFD1-211ENST00000555709 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
MTHFD1-211ENST00000555709 EHBP1L1Q8N3D4 1523 aa18.3■□□□□ 0.52
MTHFD1-211ENST00000555709 POLR1AO95602 1720 aaPredicted RBP18.3■□□□□ 0.52
MTHFD1-211ENST00000555709 APLP2Q06481 763 aa18.28■□□□□ 0.52
MTHFD1-211ENST00000555709 SAMD9LQ8IVG5 1584 aa18.28■□□□□ 0.52
MTHFD1-211ENST00000555709 PLXNC1O60486 1568 aa18.27■□□□□ 0.52
MTHFD1-211ENST00000555709 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
MTHFD1-211ENST00000555709 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
MTHFD1-211ENST00000555709 POTEAQ6S8J7 498 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms