RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
LINC00641-202ENST00000555688 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
LINC00641-202ENST00000555688 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
LINC00641-202ENST00000555688 TARBP1Q13395 1621 aaKnown RBP12.1□□□□□ -0.47
LINC00641-202ENST00000555688 HRCP23327 699 aa12.1□□□□□ -0.47
LINC00641-202ENST00000555688 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
LINC00641-202ENST00000555688 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
LINC00641-202ENST00000555688 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
LINC00641-202ENST00000555688 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
LINC00641-202ENST00000555688 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
LINC00641-202ENST00000555688 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
LINC00641-202ENST00000555688 ARAP1Q96P48 1450 aa12.08□□□□□ -0.48
LINC00641-202ENST00000555688 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
LINC00641-202ENST00000555688 GAPVD1Q14C86 1478 aa12.06□□□□□ -0.48
LINC00641-202ENST00000555688 CUL7Q14999 1698 aa12.06□□□□□ -0.48
LINC00641-202ENST00000555688 ARHGAP35Q9NRY4 1499 aa12.05□□□□□ -0.48
LINC00641-202ENST00000555688 WDR62O43379 1518 aa12.05□□□□□ -0.48
LINC00641-202ENST00000555688 PDAP1Q13442 181 aaKnown RBP12.05□□□□□ -0.48
LINC00641-202ENST00000555688 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
LINC00641-202ENST00000555688 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
LINC00641-202ENST00000555688 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
LINC00641-202ENST00000555688 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
LINC00641-202ENST00000555688 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
LINC00641-202ENST00000555688 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
LINC00641-202ENST00000555688 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
LINC00641-202ENST00000555688 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
LINC00641-202ENST00000555688 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
LINC00641-202ENST00000555688 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
LINC00641-202ENST00000555688 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
LINC00641-202ENST00000555688 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC00641-202ENST00000555688 IFT140Q96RY7 1462 aa11.99□□□□□ -0.49
LINC00641-202ENST00000555688 MAP3K13O43283 966 aa11.99□□□□□ -0.49
LINC00641-202ENST00000555688 ERCC6Q03468 1493 aa11.98□□□□□ -0.49
LINC00641-202ENST00000555688 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
LINC00641-202ENST00000555688 PSEN1P49768 467 aa11.97□□□□□ -0.49
LINC00641-202ENST00000555688 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
LINC00641-202ENST00000555688 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
LINC00641-202ENST00000555688 PBRM1Q86U86 1689 aa11.96□□□□□ -0.5
LINC00641-202ENST00000555688 CTTNBP2Q8WZ74 1663 aa11.95□□□□□ -0.5
LINC00641-202ENST00000555688 GRIN2BQ13224 1484 aa11.93□□□□□ -0.5
LINC00641-202ENST00000555688 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
LINC00641-202ENST00000555688 FHAD1B1AJZ9 1412 aa11.93□□□□□ -0.5
LINC00641-202ENST00000555688 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
LINC00641-202ENST00000555688 ADAMTS12P58397 1594 aa11.91□□□□□ -0.5
LINC00641-202ENST00000555688 EFCAB5A4FU69 1503 aa11.9□□□□□ -0.5
LINC00641-202ENST00000555688 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
LINC00641-202ENST00000555688 P3H3Q8IVL6 736 aa11.9□□□□□ -0.51
LINC00641-202ENST00000555688 FHOD3Q2V2M9 1422 aa11.88□□□□□ -0.51
LINC00641-202ENST00000555688 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
LINC00641-202ENST00000555688 BCANQ96GW7 911 aa11.87□□□□□ -0.51
LINC00641-202ENST00000555688 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
LINC00641-202ENST00000555688 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
LINC00641-202ENST00000555688 SNAPC4Q5SXM2 1469 aa11.84□□□□□ -0.51
LINC00641-202ENST00000555688 TIAM1Q13009 1591 aa11.84□□□□□ -0.51
LINC00641-202ENST00000555688 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
LINC00641-202ENST00000555688 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
LINC00641-202ENST00000555688 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
LINC00641-202ENST00000555688 MFRPQ9BY79 579 aa11.82□□□□□ -0.52
LINC00641-202ENST00000555688 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
LINC00641-202ENST00000555688 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
LINC00641-202ENST00000555688 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
LINC00641-202ENST00000555688 SOX12O15370 315 aa11.81□□□□□ -0.52
LINC00641-202ENST00000555688 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
LINC00641-202ENST00000555688 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
LINC00641-202ENST00000555688 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
LINC00641-202ENST00000555688 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
LINC00641-202ENST00000555688 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
LINC00641-202ENST00000555688 RRBP1Q9P2E9 1410 aaKnown RBP11.79□□□□□ -0.52
LINC00641-202ENST00000555688 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
LINC00641-202ENST00000555688 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
LINC00641-202ENST00000555688 KIAA0586Q9BVV6 1533 aa11.78□□□□□ -0.52
LINC00641-202ENST00000555688 UGGT2Q9NYU1 1516 aa11.78□□□□□ -0.52
LINC00641-202ENST00000555688 SYNJ2O15056 1496 aa11.77□□□□□ -0.52
LINC00641-202ENST00000555688 NLRP6P59044 892 aa11.77□□□□□ -0.53
LINC00641-202ENST00000555688 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
LINC00641-202ENST00000555688 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
LINC00641-202ENST00000555688 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
LINC00641-202ENST00000555688 CHMP7Q8WUX9 453 aaPredicted RBP11.74□□□□□ -0.53
LINC00641-202ENST00000555688 ATP1B4Q9UN42 357 aaPredicted RBP11.74□□□□□ -0.53
LINC00641-202ENST00000555688 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
LINC00641-202ENST00000555688 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
LINC00641-202ENST00000555688 CEP170Q5SW79 1584 aa11.73□□□□□ -0.53
LINC00641-202ENST00000555688 HAX1O00165 279 aa11.73□□□□□ -0.53
LINC00641-202ENST00000555688 CLCN6P51797 869 aa11.73□□□□□ -0.53
LINC00641-202ENST00000555688 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
LINC00641-202ENST00000555688 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
LINC00641-202ENST00000555688 DISP1Q96F81 1524 aa11.73□□□□□ -0.53
LINC00641-202ENST00000555688 PHLDB1Q86UU1 1377 aa11.72□□□□□ -0.53
LINC00641-202ENST00000555688 NUP160Q12769 1436 aa11.72□□□□□ -0.53
LINC00641-202ENST00000555688 TIE1P35590 1138 aa11.72□□□□□ -0.53
LINC00641-202ENST00000555688 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
LINC00641-202ENST00000555688 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
LINC00641-202ENST00000555688 PPP1R37O75864 691 aa11.68□□□□□ -0.54
LINC00641-202ENST00000555688 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
LINC00641-202ENST00000555688 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
LINC00641-202ENST00000555688 EVX2Q03828 476 aa11.66□□□□□ -0.54
LINC00641-202ENST00000555688 MKRN3Q13064 507 aaKnown RBP11.66□□□□□ -0.54
LINC00641-202ENST00000555688 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
LINC00641-202ENST00000555688 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
LINC00641-202ENST00000555688 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms