RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ARHGEF12Q9NZN5 1544 aa18.17■□□□□ 0.5
TDP1-212ENST00000555565 EEA1Q15075 1411 aa18.16■□□□□ 0.5
TDP1-212ENST00000555565 CEBPAP49715 358 aaPredicted RBP18.16■□□□□ 0.5
TDP1-212ENST00000555565 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
TDP1-212ENST00000555565 PLCH2O75038 1416 aa18.15■□□□□ 0.5
TDP1-212ENST00000555565 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.5
TDP1-212ENST00000555565 RANGAP1P46060 587 aaPredicted RBP18.14■□□□□ 0.49
TDP1-212ENST00000555565 ATP10AO60312 1499 aa18.14■□□□□ 0.49
TDP1-212ENST00000555565 STRCQ7RTU9 1775 aa18.13■□□□□ 0.49
TDP1-212ENST00000555565 PREX1Q8TCU6 1659 aa18.1■□□□□ 0.49
TDP1-212ENST00000555565 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
TDP1-212ENST00000555565 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
TDP1-212ENST00000555565 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
TDP1-212ENST00000555565 EFCAB2Q5VUJ9 269 aa18.04■□□□□ 0.48
TDP1-212ENST00000555565 PTPRTO14522 1441 aa18.04■□□□□ 0.48
TDP1-212ENST00000555565 AFAP1Q8N556 730 aa18.03■□□□□ 0.48
TDP1-212ENST00000555565 UHRF1BP1Q6BDS2 1440 aa18.02■□□□□ 0.48
TDP1-212ENST00000555565 LTBP4Q8N2S1 1624 aa18.01■□□□□ 0.47
TDP1-212ENST00000555565 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
TDP1-212ENST00000555565 SETD1BQ9UPS6 1966 aaKnown RBP18■□□□□ 0.47
TDP1-212ENST00000555565 KDM5CP41229 1560 aa17.99■□□□□ 0.47
TDP1-212ENST00000555565 SPATA31D1Q6ZQQ2 1576 aa17.99■□□□□ 0.47
TDP1-212ENST00000555565 ZNF518AQ6AHZ1 1483 aa17.98■□□□□ 0.47
TDP1-212ENST00000555565 DIP2CQ9Y2E4 1556 aa17.96■□□□□ 0.46
TDP1-212ENST00000555565 REREQ9P2R6 1566 aa17.95■□□□□ 0.46
TDP1-212ENST00000555565 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
TDP1-212ENST00000555565 KIF14Q15058 1648 aa17.94■□□□□ 0.46
TDP1-212ENST00000555565 C3P01024 1663 aa17.93■□□□□ 0.46
TDP1-212ENST00000555565 TRAPPC8Q9Y2L5 1435 aa17.93■□□□□ 0.46
TDP1-212ENST00000555565 IQSEC2Q5JU85 1478 aa17.93■□□□□ 0.46
TDP1-212ENST00000555565 MLH3Q9UHC1 1453 aa17.93■□□□□ 0.46
TDP1-212ENST00000555565 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
TDP1-212ENST00000555565 AGLP35573 1532 aa17.91■□□□□ 0.46
TDP1-212ENST00000555565 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
TDP1-212ENST00000555565 ABCA6Q8N139 1617 aa17.9■□□□□ 0.46
TDP1-212ENST00000555565 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.46
TDP1-212ENST00000555565 ARHGAP5Q13017 1502 aa17.89■□□□□ 0.45
TDP1-212ENST00000555565 CDK11AQ9UQ88 783 aaPredicted RBP17.89■□□□□ 0.45
TDP1-212ENST00000555565 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
TDP1-212ENST00000555565 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
TDP1-212ENST00000555565 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
TDP1-212ENST00000555565 MYT1LQ9UL68 1186 aa17.86■□□□□ 0.45
TDP1-212ENST00000555565 ARHGAP35Q9NRY4 1499 aa17.86■□□□□ 0.45
TDP1-212ENST00000555565 CDC42BPBQ9Y5S2 1711 aa17.84■□□□□ 0.45
TDP1-212ENST00000555565 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
TDP1-212ENST00000555565 ZNF335Q9H4Z2 1342 aaPredicted RBP17.82■□□□□ 0.44
TDP1-212ENST00000555565 NCKAP5LQ9HCH0 1330 aa17.82■□□□□ 0.44
TDP1-212ENST00000555565 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
TDP1-212ENST00000555565 CAMSAP1Q5T5Y3 1602 aa17.82■□□□□ 0.44
TDP1-212ENST00000555565 NPATQ14207 1427 aa17.81■□□□□ 0.44
TDP1-212ENST00000555565 ABCC1P33527 1531 aa17.81■□□□□ 0.44
TDP1-212ENST00000555565 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
TDP1-212ENST00000555565 LRRIQ1Q96JM4 1722 aa17.8■□□□□ 0.44
TDP1-212ENST00000555565 CLIP1P30622 1438 aa17.8■□□□□ 0.44
TDP1-212ENST00000555565 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
TDP1-212ENST00000555565 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
TDP1-212ENST00000555565 PREX2Q70Z35 1606 aa17.76■□□□□ 0.43
TDP1-212ENST00000555565 ITSN2Q9NZM3 1697 aa17.76■□□□□ 0.43
TDP1-212ENST00000555565 MROH2AA6NES4 1674 aa17.74■□□□□ 0.43
TDP1-212ENST00000555565 PKD2Q13563 968 aa17.74■□□□□ 0.43
TDP1-212ENST00000555565 TCOF1Q13428 1488 aaKnown RBP17.74■□□□□ 0.43
TDP1-212ENST00000555565 PLA2R1Q13018 1463 aa17.73■□□□□ 0.43
TDP1-212ENST00000555565 SAMD9LQ8IVG5 1584 aa17.72■□□□□ 0.43
TDP1-212ENST00000555565 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
TDP1-212ENST00000555565 HSPA1LP34931 641 aa17.68■□□□□ 0.42
TDP1-212ENST00000555565 HNRNPMP52272 730 aaKnown RBP eCLIP17.68■□□□□ 0.42
TDP1-212ENST00000555565 CDC42BPAQ5VT25 1732 aa17.68■□□□□ 0.42
TDP1-212ENST00000555565 ZNF142P52746 1687 aaPredicted RBP17.67■□□□□ 0.42
TDP1-212ENST00000555565 CASKIN1Q8WXD9 1431 aa17.67■□□□□ 0.42
TDP1-212ENST00000555565 MYO3AQ8NEV4 1616 aa17.67■□□□□ 0.42
TDP1-212ENST00000555565 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
TDP1-212ENST00000555565 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
TDP1-212ENST00000555565 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
TDP1-212ENST00000555565 CLTCQ00610 1675 aaKnown RBP17.65■□□□□ 0.42
TDP1-212ENST00000555565 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
TDP1-212ENST00000555565 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
TDP1-212ENST00000555565 GPATCH8Q9UKJ3 1502 aaKnown RBP17.65■□□□□ 0.42
TDP1-212ENST00000555565 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
TDP1-212ENST00000555565 SYCP2Q9BX26 1530 aa17.64■□□□□ 0.41
TDP1-212ENST00000555565 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
TDP1-212ENST00000555565 A2MP01023 1474 aa17.63■□□□□ 0.41
TDP1-212ENST00000555565 MED1Q15648 1581 aaPredicted RBP17.62■□□□□ 0.41
TDP1-212ENST00000555565 GGT6Q6P531 493 aa17.62■□□□□ 0.41
TDP1-212ENST00000555565 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
TDP1-212ENST00000555565 ATP7AQ04656 1500 aa17.61■□□□□ 0.41
TDP1-212ENST00000555565 DNMT1P26358 1616 aaKnown RBP17.59■□□□□ 0.41
TDP1-212ENST00000555565 INO80Q9ULG1 1556 aaPredicted RBP17.59■□□□□ 0.41
TDP1-212ENST00000555565 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
TDP1-212ENST00000555565 PIP4K2BP78356 416 aa17.59■□□□□ 0.41
TDP1-212ENST00000555565 TOM1O60784 492 aa17.57■□□□□ 0.4
TDP1-212ENST00000555565 ALKQ9UM73 1620 aa17.56■□□□□ 0.4
TDP1-212ENST00000555565 NEURL4Q96JN8 1562 aa17.56■□□□□ 0.4
TDP1-212ENST00000555565 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
TDP1-212ENST00000555565 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
TDP1-212ENST00000555565 CPS1P31327 1500 aa17.55■□□□□ 0.4
TDP1-212ENST00000555565 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
TDP1-212ENST00000555565 FBXO31Q5XUX0 539 aaPredicted RBP17.54■□□□□ 0.4
TDP1-212ENST00000555565 PLEKHH2Q8IVE3 1493 aa17.53■□□□□ 0.4
TDP1-212ENST00000555565 FYCO1Q9BQS8 1478 aa17.53■□□□□ 0.4
TDP1-212ENST00000555565 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms