RNA–Protein interactions for RNA: ENST00000555499.1

MLH3-208, Transcript of mutL homolog 3, humanhuman

TSL 5

Gene MLH3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-208ENST00000555499 ARHGEF12Q9NZN5 1544 aa11.57□□□□□ -0.56
MLH3-208ENST00000555499 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
MLH3-208ENST00000555499 NUP153P49790 1475 aaKnown RBP11.56□□□□□ -0.56
MLH3-208ENST00000555499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
MLH3-208ENST00000555499 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
MLH3-208ENST00000555499 DMRT2Q9Y5R5 561 aa11.53□□□□□ -0.56
MLH3-208ENST00000555499 SAMD9Q5K651 1589 aa11.52□□□□□ -0.57
MLH3-208ENST00000555499 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
MLH3-208ENST00000555499 PTPRTO14522 1441 aa11.52□□□□□ -0.57
MLH3-208ENST00000555499 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
MLH3-208ENST00000555499 UBTFP17480 764 aaKnown RBP11.51□□□□□ -0.57
MLH3-208ENST00000555499 RANGAP1P46060 587 aaPredicted RBP11.5□□□□□ -0.57
MLH3-208ENST00000555499 SCAPERQ9BY12 1400 aa11.5□□□□□ -0.57
MLH3-208ENST00000555499 ATP10AO60312 1499 aa11.5□□□□□ -0.57
MLH3-208ENST00000555499 MAGI2Q86UL8 1455 aa11.5□□□□□ -0.57
MLH3-208ENST00000555499 C9orf84Q5VXU9 1444 aa11.48□□□□□ -0.57
MLH3-208ENST00000555499 C3P01024 1663 aa11.47□□□□□ -0.57
MLH3-208ENST00000555499 IQSEC2Q5JU85 1478 aa11.46□□□□□ -0.57
MLH3-208ENST00000555499 ZNF335Q9H4Z2 1342 aaPredicted RBP11.46□□□□□ -0.57
MLH3-208ENST00000555499 PLEKHD1A6NEE1 506 aa11.46□□□□□ -0.57
MLH3-208ENST00000555499 UBAP1LF5GYI3 381 aa11.46□□□□□ -0.57
MLH3-208ENST00000555499 MED1Q15648 1581 aaPredicted RBP11.45□□□□□ -0.58
MLH3-208ENST00000555499 NCOA1Q15788 1441 aa11.45□□□□□ -0.58
MLH3-208ENST00000555499 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
MLH3-208ENST00000555499 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
MLH3-208ENST00000555499 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
MLH3-208ENST00000555499 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
MLH3-208ENST00000555499 NCKAP5LQ9HCH0 1330 aa11.43□□□□□ -0.58
MLH3-208ENST00000555499 PLCH2O75038 1416 aa11.42□□□□□ -0.58
MLH3-208ENST00000555499 CAMSAP1Q5T5Y3 1602 aa11.42□□□□□ -0.58
MLH3-208ENST00000555499 DIP2CQ9Y2E4 1556 aa11.41□□□□□ -0.58
MLH3-208ENST00000555499 HSPA1LP34931 641 aa11.41□□□□□ -0.58
MLH3-208ENST00000555499 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
MLH3-208ENST00000555499 ABCA6Q8N139 1617 aa11.39□□□□□ -0.59
MLH3-208ENST00000555499 TRAPPC8Q9Y2L5 1435 aa11.39□□□□□ -0.59
MLH3-208ENST00000555499 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
MLH3-208ENST00000555499 KDM5CP41229 1560 aa11.37□□□□□ -0.59
MLH3-208ENST00000555499 PIP4K2BP78356 416 aa11.37□□□□□ -0.59
MLH3-208ENST00000555499 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
MLH3-208ENST00000555499 KIF14Q15058 1648 aa11.36□□□□□ -0.59
MLH3-208ENST00000555499 MYO5CQ9NQX4 1742 aa11.36□□□□□ -0.59
MLH3-208ENST00000555499 EFCAB2Q5VUJ9 269 aa11.35□□□□□ -0.59
MLH3-208ENST00000555499 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
MLH3-208ENST00000555499 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
MLH3-208ENST00000555499 REREQ9P2R6 1566 aa11.33□□□□□ -0.6
MLH3-208ENST00000555499 SENP3Q9H4L4 574 aaPredicted RBP11.33□□□□□ -0.6
MLH3-208ENST00000555499 ARHGAP5Q13017 1502 aa11.32□□□□□ -0.6
MLH3-208ENST00000555499 ESF1Q9H501 851 aaKnown RBP11.32□□□□□ -0.6
MLH3-208ENST00000555499 AGLP35573 1532 aa11.31□□□□□ -0.6
MLH3-208ENST00000555499 APLP2Q06481 763 aa11.31□□□□□ -0.6
MLH3-208ENST00000555499 PHF23Q9BUL5 403 aaPredicted RBP11.31□□□□□ -0.6
MLH3-208ENST00000555499 CLIP1P30622 1438 aa11.31□□□□□ -0.6
MLH3-208ENST00000555499 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
MLH3-208ENST00000555499 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
MLH3-208ENST00000555499 TCOF1Q13428 1488 aaKnown RBP11.3□□□□□ -0.6
MLH3-208ENST00000555499 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
MLH3-208ENST00000555499 MLH3Q9UHC1 1453 aa11.29□□□□□ -0.6
MLH3-208ENST00000555499 ZMYM3Q14202 1370 aa11.28□□□□□ -0.6
MLH3-208ENST00000555499 KIDINS220Q9ULH0 1771 aa11.28□□□□□ -0.6
MLH3-208ENST00000555499 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
MLH3-208ENST00000555499 SUPT6HQ7KZ85 1726 aaKnown RBP11.28□□□□□ -0.6
MLH3-208ENST00000555499 CDC42BPBQ9Y5S2 1711 aa11.28□□□□□ -0.6
MLH3-208ENST00000555499 NPATQ14207 1427 aa11.27□□□□□ -0.6
MLH3-208ENST00000555499 CNTLNQ9NXG0 1405 aa11.27□□□□□ -0.6
MLH3-208ENST00000555499 PPP6R1Q9UPN7 881 aa11.27□□□□□ -0.61
MLH3-208ENST00000555499 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.61
MLH3-208ENST00000555499 MROH2AA6NES4 1674 aa11.27□□□□□ -0.61
MLH3-208ENST00000555499 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.61
MLH3-208ENST00000555499 PLA2R1Q13018 1463 aa11.26□□□□□ -0.61
MLH3-208ENST00000555499 ABCC1P33527 1531 aa11.26□□□□□ -0.61
MLH3-208ENST00000555499 PKD2Q13563 968 aa11.26□□□□□ -0.61
MLH3-208ENST00000555499 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
MLH3-208ENST00000555499 ITSN2Q9NZM3 1697 aa11.26□□□□□ -0.61
MLH3-208ENST00000555499 LRRIQ1Q96JM4 1722 aa11.24□□□□□ -0.61
MLH3-208ENST00000555499 TOM1O60784 492 aa11.24□□□□□ -0.61
MLH3-208ENST00000555499 PTPRKQ15262 1439 aa11.24□□□□□ -0.61
MLH3-208ENST00000555499 TROQ12816 1431 aaPredicted RBP11.23□□□□□ -0.61
MLH3-208ENST00000555499 NEURL4Q96JN8 1562 aa11.23□□□□□ -0.61
MLH3-208ENST00000555499 PREX2Q70Z35 1606 aa11.21□□□□□ -0.61
MLH3-208ENST00000555499 SHANK2Q9UPX8 1470 aa11.21□□□□□ -0.61
MLH3-208ENST00000555499 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
MLH3-208ENST00000555499 SAMD9LQ8IVG5 1584 aa11.2□□□□□ -0.62
MLH3-208ENST00000555499 CPS1P31327 1500 aa11.2□□□□□ -0.62
MLH3-208ENST00000555499 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
MLH3-208ENST00000555499 VPS8Q8N3P4 1428 aa11.19□□□□□ -0.62
MLH3-208ENST00000555499 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
MLH3-208ENST00000555499 GGT6Q6P531 493 aa11.17□□□□□ -0.62
MLH3-208ENST00000555499 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
MLH3-208ENST00000555499 FMN1Q68DA7 1419 aa11.17□□□□□ -0.62
MLH3-208ENST00000555499 PLXNC1O60486 1568 aa11.16□□□□□ -0.62
MLH3-208ENST00000555499 STRCP1A6NGW2 1772 aa11.16□□□□□ -0.62
MLH3-208ENST00000555499 SYCP2Q9BX26 1530 aa11.16□□□□□ -0.62
MLH3-208ENST00000555499 CDC42BPAQ5VT25 1732 aa11.16□□□□□ -0.62
MLH3-208ENST00000555499 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
MLH3-208ENST00000555499 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
MLH3-208ENST00000555499 CDK11AQ9UQ88 783 aaPredicted RBP11.16□□□□□ -0.62
MLH3-208ENST00000555499 ARHGAP35Q9NRY4 1499 aa11.16□□□□□ -0.62
MLH3-208ENST00000555499 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.62
MLH3-208ENST00000555499 HNRNPMP52272 730 aaKnown RBP eCLIP11.15□□□□□ -0.62
MLH3-208ENST00000555499 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms