RNA–Protein interactions for RNA: ENST00000554054.5

SKOR1-203, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKOR1, Length 3,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-203ENST00000554054 PLIN1O60240 522 aa23.86■■□□□ 1.41
SKOR1-203ENST00000554054 PDE4AP27815 886 aa23.86■■□□□ 1.41
SKOR1-203ENST00000554054 KDM2AQ9Y2K7 1162 aa23.84■■□□□ 1.41
SKOR1-203ENST00000554054 PLEKHD1A6NEE1 506 aa23.83■■□□□ 1.41
SKOR1-203ENST00000554054 TIAM1Q13009 1591 aa23.81■■□□□ 1.4
SKOR1-203ENST00000554054 JPH4Q96JJ6 628 aa23.8■■□□□ 1.4
SKOR1-203ENST00000554054 NUDCQ9Y266 331 aa23.79■■□□□ 1.4
SKOR1-203ENST00000554054 GSE1Q14687 1217 aa23.78■■□□□ 1.4
SKOR1-203ENST00000554054 FRAT1Q92837 279 aaPredicted RBP23.78■■□□□ 1.4
SKOR1-203ENST00000554054 CASKIN1Q8WXD9 1431 aa23.78■■□□□ 1.4
SKOR1-203ENST00000554054 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
SKOR1-203ENST00000554054 C11orf95C9JLR9 678 aaPredicted RBP23.78■■□□□ 1.4
SKOR1-203ENST00000554054 NAP1L5Q96NT1 182 aaPredicted RBP23.77■■□□□ 1.4
SKOR1-203ENST00000554054 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
SKOR1-203ENST00000554054 L3MBTL2Q969R5 705 aa23.77■■□□□ 1.4
SKOR1-203ENST00000554054 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
SKOR1-203ENST00000554054 TSPY4P0CV99 314 aa23.74■■□□□ 1.39
SKOR1-203ENST00000554054 TSPY10P0CW01 314 aa23.74■■□□□ 1.39
SKOR1-203ENST00000554054 ZNF608Q9ULD9 1512 aaPredicted RBP23.73■■□□□ 1.39
SKOR1-203ENST00000554054 VSIG10Q8N0Z9 540 aa23.72■■□□□ 1.39
SKOR1-203ENST00000554054 SPRYD3Q8NCJ5 442 aa23.72■■□□□ 1.39
SKOR1-203ENST00000554054 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
SKOR1-203ENST00000554054 NFKBIBQ15653 356 aa23.71■■□□□ 1.39
SKOR1-203ENST00000554054 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.38
SKOR1-203ENST00000554054 NCOA2Q15596 1464 aa23.69■■□□□ 1.38
SKOR1-203ENST00000554054 SLKQ9H2G2 1235 aaPredicted RBP23.69■■□□□ 1.38
SKOR1-203ENST00000554054 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
SKOR1-203ENST00000554054 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
SKOR1-203ENST00000554054 GZF1Q9H116 711 aaPredicted RBP23.67■■□□□ 1.38
SKOR1-203ENST00000554054 FYCO1Q9BQS8 1478 aa23.66■■□□□ 1.38
SKOR1-203ENST00000554054 CCDC18Q5T9S5 1454 aa23.64■■□□□ 1.38
SKOR1-203ENST00000554054 RCAN3Q9UKA8 241 aa23.64■■□□□ 1.38
SKOR1-203ENST00000554054 DDRGK1Q96HY6 314 aa23.64■■□□□ 1.37
SKOR1-203ENST00000554054 FRAT2O75474 233 aaPredicted RBP23.63■■□□□ 1.37
SKOR1-203ENST00000554054 TCERG1O14776 1098 aaKnown RBP23.62■■□□□ 1.37
SKOR1-203ENST00000554054 HNRNPMP52272 730 aaKnown RBP eCLIP23.62■■□□□ 1.37
SKOR1-203ENST00000554054 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
SKOR1-203ENST00000554054 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
SKOR1-203ENST00000554054 GLIPR1L2Q4G1C9 344 aa23.61■■□□□ 1.37
SKOR1-203ENST00000554054 UBE2Q2Q8WVN8 375 aa23.61■■□□□ 1.37
SKOR1-203ENST00000554054 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
SKOR1-203ENST00000554054 CDK13Q14004 1512 aaKnown RBP23.61■■□□□ 1.37
SKOR1-203ENST00000554054 PKD2Q13563 968 aa23.57■■□□□ 1.36
SKOR1-203ENST00000554054 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
SKOR1-203ENST00000554054 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
SKOR1-203ENST00000554054 PKNOX2Q96KN3 472 aa23.56■■□□□ 1.36
SKOR1-203ENST00000554054 ARID3AQ99856 593 aa23.55■■□□□ 1.36
SKOR1-203ENST00000554054 USP35Q9P2H5 1018 aa23.55■■□□□ 1.36
SKOR1-203ENST00000554054 CDCA7LQ96GN5 454 aa23.55■■□□□ 1.36
SKOR1-203ENST00000554054 RRP1P56182 461 aaKnown RBP23.54■■□□□ 1.36
SKOR1-203ENST00000554054 PRDM2Q13029 1718 aa23.54■■□□□ 1.36
SKOR1-203ENST00000554054 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
SKOR1-203ENST00000554054 CC2D1BQ5T0F9 858 aaKnown RBP23.53■■□□□ 1.36
SKOR1-203ENST00000554054 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
SKOR1-203ENST00000554054 KIF7Q2M1P5 1343 aa23.52■■□□□ 1.36
SKOR1-203ENST00000554054 CRBNQ96SW2 442 aa23.51■■□□□ 1.35
SKOR1-203ENST00000554054 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
SKOR1-203ENST00000554054 BACH2Q9BYV9 841 aa23.51■■□□□ 1.35
SKOR1-203ENST00000554054 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
SKOR1-203ENST00000554054 PRG4Q92954 1404 aaPredicted RBP23.49■■□□□ 1.35
SKOR1-203ENST00000554054 CANXP27824 592 aaKnown RBP23.49■■□□□ 1.35
SKOR1-203ENST00000554054 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
SKOR1-203ENST00000554054 CUL7Q14999 1698 aa23.47■■□□□ 1.35
SKOR1-203ENST00000554054 NBPF8Q3BBV2 869 aa23.46■■□□□ 1.35
SKOR1-203ENST00000554054 CNTLNQ9NXG0 1405 aa23.45■■□□□ 1.34
SKOR1-203ENST00000554054 DCAF11Q8TEB1 546 aa23.43■■□□□ 1.34
SKOR1-203ENST00000554054 IFT140Q96RY7 1462 aa23.42■■□□□ 1.34
SKOR1-203ENST00000554054 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
SKOR1-203ENST00000554054 EPRSP07814 1512 aaKnown RBP23.42■■□□□ 1.34
SKOR1-203ENST00000554054 NAIPQ13075 1403 aa23.42■■□□□ 1.34
SKOR1-203ENST00000554054 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
SKOR1-203ENST00000554054 NUP155O75694 1391 aa23.41■■□□□ 1.34
SKOR1-203ENST00000554054 RSPH6AQ9H0K4 717 aa23.4■■□□□ 1.34
SKOR1-203ENST00000554054 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
SKOR1-203ENST00000554054 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.33
SKOR1-203ENST00000554054 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
SKOR1-203ENST00000554054 POGKQ9P215 609 aa23.38■■□□□ 1.33
SKOR1-203ENST00000554054 MAP3K1Q13233 1512 aa23.37■■□□□ 1.33
SKOR1-203ENST00000554054 CHGAP10645 457 aaKnown RBP23.37■■□□□ 1.33
SKOR1-203ENST00000554054 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
SKOR1-203ENST00000554054 PTPRGP23470 1445 aa23.35■■□□□ 1.33
SKOR1-203ENST00000554054 HSP90AA2PQ14568 343 aaPredicted RBP23.34■■□□□ 1.33
SKOR1-203ENST00000554054 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
SKOR1-203ENST00000554054 C20orf194Q5TEA3 1177 aa23.32■■□□□ 1.32
SKOR1-203ENST00000554054 HSP90AA1P07900 732 aaKnown RBP23.31■■□□□ 1.32
SKOR1-203ENST00000554054 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
SKOR1-203ENST00000554054 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
SKOR1-203ENST00000554054 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
SKOR1-203ENST00000554054 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
SKOR1-203ENST00000554054 GRIN2AQ12879 1464 aa23.28■■□□□ 1.32
SKOR1-203ENST00000554054 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
SKOR1-203ENST00000554054 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
SKOR1-203ENST00000554054 CTTNBP2Q8WZ74 1663 aa23.27■■□□□ 1.32
SKOR1-203ENST00000554054 SMG6Q86US8 1419 aaKnown RBP23.26■■□□□ 1.31
SKOR1-203ENST00000554054 ZMYND15Q9H091 742 aa23.25■■□□□ 1.31
SKOR1-203ENST00000554054 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
SKOR1-203ENST00000554054 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
SKOR1-203ENST00000554054 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
SKOR1-203ENST00000554054 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
SKOR1-203ENST00000554054 WASHC2CQ9Y4E1 1318 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms