RNA–Protein interactions for RNA: ENST00000553804.5

ITGA7-206, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGA7, Length 3,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-206ENST00000553804 SKAP1Q86WV1 359 aa13.81□□□□□ -0.2
ITGA7-206ENST00000553804 NUDCQ9Y266 331 aa13.8□□□□□ -0.2
ITGA7-206ENST00000553804 AKNAQ7Z591 1439 aa13.8□□□□□ -0.2
ITGA7-206ENST00000553804 FRAT1Q92837 279 aaPredicted RBP13.79□□□□□ -0.2
ITGA7-206ENST00000553804 PLIN1O60240 522 aa13.78□□□□□ -0.2
ITGA7-206ENST00000553804 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
ITGA7-206ENST00000553804 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
ITGA7-206ENST00000553804 ZBED9Q6R2W3 1325 aa13.78□□□□□ -0.2
ITGA7-206ENST00000553804 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
ITGA7-206ENST00000553804 TCERG1O14776 1098 aaKnown RBP13.76□□□□□ -0.21
ITGA7-206ENST00000553804 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
ITGA7-206ENST00000553804 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
ITGA7-206ENST00000553804 SLKQ9H2G2 1235 aaPredicted RBP13.75□□□□□ -0.21
ITGA7-206ENST00000553804 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
ITGA7-206ENST00000553804 PHLDB1Q86UU1 1377 aa13.74□□□□□ -0.21
ITGA7-206ENST00000553804 PKNOX2Q96KN3 472 aa13.74□□□□□ -0.21
ITGA7-206ENST00000553804 GZF1Q9H116 711 aaPredicted RBP13.74□□□□□ -0.21
ITGA7-206ENST00000553804 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
ITGA7-206ENST00000553804 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
ITGA7-206ENST00000553804 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
ITGA7-206ENST00000553804 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
ITGA7-206ENST00000553804 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
ITGA7-206ENST00000553804 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
ITGA7-206ENST00000553804 WDR62O43379 1518 aa13.71□□□□□ -0.21
ITGA7-206ENST00000553804 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
ITGA7-206ENST00000553804 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
ITGA7-206ENST00000553804 FRAT2O75474 233 aaPredicted RBP13.69□□□□□ -0.22
ITGA7-206ENST00000553804 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
ITGA7-206ENST00000553804 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
ITGA7-206ENST00000553804 ARID3AQ99856 593 aa13.68□□□□□ -0.22
ITGA7-206ENST00000553804 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
ITGA7-206ENST00000553804 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
ITGA7-206ENST00000553804 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
ITGA7-206ENST00000553804 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
ITGA7-206ENST00000553804 TIAM1Q13009 1591 aa13.65□□□□□ -0.23
ITGA7-206ENST00000553804 RRP1P56182 461 aaKnown RBP13.64□□□□□ -0.23
ITGA7-206ENST00000553804 THOC2Q8NI27 1593 aaKnown RBP13.63□□□□□ -0.23
ITGA7-206ENST00000553804 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
ITGA7-206ENST00000553804 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
ITGA7-206ENST00000553804 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
ITGA7-206ENST00000553804 CUL7Q14999 1698 aa13.63□□□□□ -0.23
ITGA7-206ENST00000553804 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
ITGA7-206ENST00000553804 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
ITGA7-206ENST00000553804 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
ITGA7-206ENST00000553804 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
ITGA7-206ENST00000553804 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
ITGA7-206ENST00000553804 EIF4G3O43432 1585 aaKnown RBP13.61□□□□□ -0.23
ITGA7-206ENST00000553804 CRBNQ96SW2 442 aa13.61□□□□□ -0.23
ITGA7-206ENST00000553804 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
ITGA7-206ENST00000553804 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
ITGA7-206ENST00000553804 TRIM44Q96DX7 344 aaPredicted RBP13.6□□□□□ -0.23
ITGA7-206ENST00000553804 CDCA7LQ96GN5 454 aa13.58□□□□□ -0.24
ITGA7-206ENST00000553804 CARD11Q9BXL7 1154 aa13.58□□□□□ -0.24
ITGA7-206ENST00000553804 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
ITGA7-206ENST00000553804 BECN1Q14457 450 aa13.58□□□□□ -0.24
ITGA7-206ENST00000553804 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
ITGA7-206ENST00000553804 MPHOSPH9Q99550 1183 aa13.58□□□□□ -0.24
ITGA7-206ENST00000553804 PBRM1Q86U86 1689 aa13.57□□□□□ -0.24
ITGA7-206ENST00000553804 MAPKBP1O60336 1514 aa13.57□□□□□ -0.24
ITGA7-206ENST00000553804 CCDC7Q96M83 1385 aa13.56□□□□□ -0.24
ITGA7-206ENST00000553804 FYCO1Q9BQS8 1478 aa13.56□□□□□ -0.24
ITGA7-206ENST00000553804 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
ITGA7-206ENST00000553804 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
ITGA7-206ENST00000553804 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
ITGA7-206ENST00000553804 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
ITGA7-206ENST00000553804 EFCAB5A4FU69 1503 aa13.54□□□□□ -0.24
ITGA7-206ENST00000553804 FGD6Q6ZV73 1430 aa13.54□□□□□ -0.24
ITGA7-206ENST00000553804 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
ITGA7-206ENST00000553804 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
ITGA7-206ENST00000553804 WDR43Q15061 677 aaKnown RBP eCLIP13.53□□□□□ -0.24
ITGA7-206ENST00000553804 RGL3Q3MIN7 710 aa13.53□□□□□ -0.24
ITGA7-206ENST00000553804 POGKQ9P215 609 aa13.53□□□□□ -0.24
ITGA7-206ENST00000553804 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
ITGA7-206ENST00000553804 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
ITGA7-206ENST00000553804 CFDP1Q9UEE9 299 aaPredicted RBP13.52□□□□□ -0.24
ITGA7-206ENST00000553804 MS4A1P11836 297 aa13.52□□□□□ -0.25
ITGA7-206ENST00000553804 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
ITGA7-206ENST00000553804 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
ITGA7-206ENST00000553804 NCOA2Q15596 1464 aa13.51□□□□□ -0.25
ITGA7-206ENST00000553804 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
ITGA7-206ENST00000553804 NBPF8Q3BBV2 869 aa13.5□□□□□ -0.25
ITGA7-206ENST00000553804 FAM43AQ8N2R8 423 aa13.5□□□□□ -0.25
ITGA7-206ENST00000553804 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
ITGA7-206ENST00000553804 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
ITGA7-206ENST00000553804 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
ITGA7-206ENST00000553804 GOLGA6L3A6NEY3 463 aa13.5□□□□□ -0.25
ITGA7-206ENST00000553804 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
ITGA7-206ENST00000553804 ANP32BQ92688 251 aaKnown RBP13.49□□□□□ -0.25
ITGA7-206ENST00000553804 WASHC2CQ9Y4E1 1318 aa13.49□□□□□ -0.25
ITGA7-206ENST00000553804 NEUROD2Q15784 382 aa13.49□□□□□ -0.25
ITGA7-206ENST00000553804 PLEKHD1A6NEE1 506 aa13.49□□□□□ -0.25
ITGA7-206ENST00000553804 KIAA0586Q9BVV6 1533 aa13.48□□□□□ -0.25
ITGA7-206ENST00000553804 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
ITGA7-206ENST00000553804 CDK13Q14004 1512 aaKnown RBP13.47□□□□□ -0.25
ITGA7-206ENST00000553804 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
ITGA7-206ENST00000553804 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
ITGA7-206ENST00000553804 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.26
ITGA7-206ENST00000553804 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.26
ITGA7-206ENST00000553804 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
ITGA7-206ENST00000553804 MAP3K1Q13233 1512 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms