RNA–Protein interactions for RNA: ENST00000552668.1

KRT4-205, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-205ENST00000552668 PREX1Q8TCU6 1659 aa17.46■□□□□ 0.39
KRT4-205ENST00000552668 CEBPAP49715 358 aaPredicted RBP17.46■□□□□ 0.39
KRT4-205ENST00000552668 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
KRT4-205ENST00000552668 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
KRT4-205ENST00000552668 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
KRT4-205ENST00000552668 ATP10AO60312 1499 aa17.41■□□□□ 0.38
KRT4-205ENST00000552668 LTBP4Q8N2S1 1624 aa17.4■□□□□ 0.38
KRT4-205ENST00000552668 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
KRT4-205ENST00000552668 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
KRT4-205ENST00000552668 PTPRTO14522 1441 aa17.38■□□□□ 0.37
KRT4-205ENST00000552668 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
KRT4-205ENST00000552668 PLCH2O75038 1416 aa17.37■□□□□ 0.37
KRT4-205ENST00000552668 UHRF1BP1Q6BDS2 1440 aa17.34■□□□□ 0.37
KRT4-205ENST00000552668 CDK13Q14004 1512 aaKnown RBP17.32■□□□□ 0.36
KRT4-205ENST00000552668 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
KRT4-205ENST00000552668 RANGAP1P46060 587 aaPredicted RBP17.3■□□□□ 0.36
KRT4-205ENST00000552668 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
KRT4-205ENST00000552668 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
KRT4-205ENST00000552668 KDM5CP41229 1560 aa17.28■□□□□ 0.36
KRT4-205ENST00000552668 C3P01024 1663 aa17.27■□□□□ 0.36
KRT4-205ENST00000552668 AFAP1Q8N556 730 aa17.27■□□□□ 0.36
KRT4-205ENST00000552668 NCOA1Q15788 1441 aa17.27■□□□□ 0.35
KRT4-205ENST00000552668 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
KRT4-205ENST00000552668 REREQ9P2R6 1566 aa17.24■□□□□ 0.35
KRT4-205ENST00000552668 EFCAB2Q5VUJ9 269 aa17.24■□□□□ 0.35
KRT4-205ENST00000552668 ZNF518AQ6AHZ1 1483 aa17.24■□□□□ 0.35
KRT4-205ENST00000552668 TRAPPC8Q9Y2L5 1435 aa17.22■□□□□ 0.35
KRT4-205ENST00000552668 KIF14Q15058 1648 aa17.21■□□□□ 0.35
KRT4-205ENST00000552668 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
KRT4-205ENST00000552668 MYO5CQ9NQX4 1742 aa17.21■□□□□ 0.35
KRT4-205ENST00000552668 AGLP35573 1532 aa17.2■□□□□ 0.34
KRT4-205ENST00000552668 ZNF335Q9H4Z2 1342 aaPredicted RBP17.18■□□□□ 0.34
KRT4-205ENST00000552668 MLH3Q9UHC1 1453 aa17.18■□□□□ 0.34
KRT4-205ENST00000552668 CAMSAP1Q5T5Y3 1602 aa17.16■□□□□ 0.34
KRT4-205ENST00000552668 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
KRT4-205ENST00000552668 ARHGAP5Q13017 1502 aa17.14■□□□□ 0.33
KRT4-205ENST00000552668 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
KRT4-205ENST00000552668 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
KRT4-205ENST00000552668 NPATQ14207 1427 aa17.12■□□□□ 0.33
KRT4-205ENST00000552668 CNTLNQ9NXG0 1405 aa17.1■□□□□ 0.33
KRT4-205ENST00000552668 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
KRT4-205ENST00000552668 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
KRT4-205ENST00000552668 ABCC1P33527 1531 aa17.09■□□□□ 0.33
KRT4-205ENST00000552668 MED1Q15648 1581 aaPredicted RBP17.08■□□□□ 0.32
KRT4-205ENST00000552668 TCOF1Q13428 1488 aaKnown RBP17.08■□□□□ 0.32
KRT4-205ENST00000552668 ZMYM3Q14202 1370 aa17.07■□□□□ 0.32
KRT4-205ENST00000552668 EEA1Q15075 1411 aa17.06■□□□□ 0.32
KRT4-205ENST00000552668 HSPA1LP34931 641 aa17.06■□□□□ 0.32
KRT4-205ENST00000552668 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
KRT4-205ENST00000552668 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
KRT4-205ENST00000552668 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
KRT4-205ENST00000552668 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
KRT4-205ENST00000552668 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
KRT4-205ENST00000552668 ARHGAP35Q9NRY4 1499 aa17.05■□□□□ 0.32
KRT4-205ENST00000552668 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
KRT4-205ENST00000552668 ATP1B4Q9UN42 357 aaPredicted RBP17.04■□□□□ 0.32
KRT4-205ENST00000552668 FMN1Q68DA7 1419 aa17.04■□□□□ 0.32
KRT4-205ENST00000552668 ZNF142P52746 1687 aaPredicted RBP17.04■□□□□ 0.32
KRT4-205ENST00000552668 CDK11AQ9UQ88 783 aaPredicted RBP17.03■□□□□ 0.32
KRT4-205ENST00000552668 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
KRT4-205ENST00000552668 PKD2Q13563 968 aa17.02■□□□□ 0.32
KRT4-205ENST00000552668 MYO3AQ8NEV4 1616 aa17.02■□□□□ 0.31
KRT4-205ENST00000552668 PTPRKQ15262 1439 aa17.02■□□□□ 0.31
KRT4-205ENST00000552668 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
KRT4-205ENST00000552668 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
KRT4-205ENST00000552668 CLIP1P30622 1438 aa16.99■□□□□ 0.31
KRT4-205ENST00000552668 ALKQ9UM73 1620 aa16.98■□□□□ 0.31
KRT4-205ENST00000552668 CLTCQ00610 1675 aaKnown RBP16.97■□□□□ 0.31
KRT4-205ENST00000552668 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
KRT4-205ENST00000552668 PLXNC1O60486 1568 aa16.96■□□□□ 0.31
KRT4-205ENST00000552668 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
KRT4-205ENST00000552668 CDC42BPAQ5VT25 1732 aa16.94■□□□□ 0.3
KRT4-205ENST00000552668 NEURL4Q96JN8 1562 aa16.94■□□□□ 0.3
KRT4-205ENST00000552668 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
KRT4-205ENST00000552668 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
KRT4-205ENST00000552668 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
KRT4-205ENST00000552668 A2ML1A8K2U0 1454 aa16.91■□□□□ 0.3
KRT4-205ENST00000552668 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
KRT4-205ENST00000552668 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
KRT4-205ENST00000552668 SPAG9O60271 1321 aaKnown RBP16.9■□□□□ 0.3
KRT4-205ENST00000552668 CPS1P31327 1500 aa16.9■□□□□ 0.3
KRT4-205ENST00000552668 INO80Q9ULG1 1556 aaPredicted RBP16.89■□□□□ 0.3
KRT4-205ENST00000552668 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.29
KRT4-205ENST00000552668 ATP7AQ04656 1500 aa16.89■□□□□ 0.29
KRT4-205ENST00000552668 VWDEQ8N2E2 1590 aa16.89■□□□□ 0.29
KRT4-205ENST00000552668 A2MP01023 1474 aa16.88■□□□□ 0.29
KRT4-205ENST00000552668 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
KRT4-205ENST00000552668 TOM1O60784 492 aa16.88■□□□□ 0.29
KRT4-205ENST00000552668 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
KRT4-205ENST00000552668 CASKIN1Q8WXD9 1431 aa16.86■□□□□ 0.29
KRT4-205ENST00000552668 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
KRT4-205ENST00000552668 GGT6Q6P531 493 aa16.85■□□□□ 0.29
KRT4-205ENST00000552668 RGS17Q9UGC6 210 aaPredicted RBP16.85■□□□□ 0.29
KRT4-205ENST00000552668 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
KRT4-205ENST00000552668 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
KRT4-205ENST00000552668 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.28
KRT4-205ENST00000552668 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.28
KRT4-205ENST00000552668 FBXO31Q5XUX0 539 aaPredicted RBP16.82■□□□□ 0.28
KRT4-205ENST00000552668 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
KRT4-205ENST00000552668 TNRQ92752 1358 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms