RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, humanhuman

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-223ENST00000552352 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
RPH3A-223ENST00000552352 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.61
RPH3A-223ENST00000552352 FAM50AQ14320 339 aaKnown RBP11.26□□□□□ -0.61
RPH3A-223ENST00000552352 ABCA8O94911 1581 aa11.25□□□□□ -0.61
RPH3A-223ENST00000552352 GCC2Q8IWJ2 1684 aa11.25□□□□□ -0.61
RPH3A-223ENST00000552352 ANP32CO43423 234 aa11.24□□□□□ -0.61
RPH3A-223ENST00000552352 TROQ12816 1431 aaPredicted RBP11.23□□□□□ -0.61
RPH3A-223ENST00000552352 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
RPH3A-223ENST00000552352 SHROOM2Q13796 1616 aa11.23□□□□□ -0.61
RPH3A-223ENST00000552352 SIN3AQ96ST3 1273 aa11.23□□□□□ -0.61
RPH3A-223ENST00000552352 NAIPQ13075 1403 aa11.22□□□□□ -0.61
RPH3A-223ENST00000552352 TRIM52Q96A61 297 aa11.22□□□□□ -0.61
RPH3A-223ENST00000552352 UACAQ9BZF9 1416 aa11.22□□□□□ -0.61
RPH3A-223ENST00000552352 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
RPH3A-223ENST00000552352 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
RPH3A-223ENST00000552352 ITSN2Q9NZM3 1697 aa11.21□□□□□ -0.61
RPH3A-223ENST00000552352 ROCK1Q13464 1354 aa11.2□□□□□ -0.62
RPH3A-223ENST00000552352 FANCIQ9NVI1 1328 aa11.2□□□□□ -0.62
RPH3A-223ENST00000552352 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
RPH3A-223ENST00000552352 MSH5O43196 834 aa11.19□□□□□ -0.62
RPH3A-223ENST00000552352 CHD1O14646 1710 aa11.19□□□□□ -0.62
RPH3A-223ENST00000552352 PLB1Q6P1J6 1458 aa11.18□□□□□ -0.62
RPH3A-223ENST00000552352 DAPK1P53355 1430 aa11.15□□□□□ -0.62
RPH3A-223ENST00000552352 HIRIP3Q9BW71 556 aaPredicted RBP11.14□□□□□ -0.63
RPH3A-223ENST00000552352 KIF14Q15058 1648 aa11.14□□□□□ -0.63
RPH3A-223ENST00000552352 PRG4Q92954 1404 aaPredicted RBP11.14□□□□□ -0.63
RPH3A-223ENST00000552352 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
RPH3A-223ENST00000552352 GPATCH8Q9UKJ3 1502 aaKnown RBP11.13□□□□□ -0.63
RPH3A-223ENST00000552352 ATP10BO94823 1461 aa11.13□□□□□ -0.63
RPH3A-223ENST00000552352 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
RPH3A-223ENST00000552352 CLASP1Q7Z460 1538 aa11.12□□□□□ -0.63
RPH3A-223ENST00000552352 FBLN2P98095 1184 aa11.12□□□□□ -0.63
RPH3A-223ENST00000552352 CROCC2H7BZ55 1655 aa11.12□□□□□ -0.63
RPH3A-223ENST00000552352 ABCC5O15440 1437 aa11.12□□□□□ -0.63
RPH3A-223ENST00000552352 TONSLQ96HA7 1378 aa11.12□□□□□ -0.63
RPH3A-223ENST00000552352 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
RPH3A-223ENST00000552352 ADGBQ8N7X0 1667 aa11.12□□□□□ -0.63
RPH3A-223ENST00000552352 ERICH6BQ5W0A0 696 aa11.11□□□□□ -0.63
RPH3A-223ENST00000552352 CAMSAP2Q08AD1 1489 aa11.11□□□□□ -0.63
RPH3A-223ENST00000552352 SHANK2Q9UPX8 1470 aa11.11□□□□□ -0.63
RPH3A-223ENST00000552352 PTPRGP23470 1445 aa11.11□□□□□ -0.63
RPH3A-223ENST00000552352 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
RPH3A-223ENST00000552352 MYT1LQ9UL68 1186 aa11.1□□□□□ -0.63
RPH3A-223ENST00000552352 CDC42BPAQ5VT25 1732 aa11.09□□□□□ -0.63
RPH3A-223ENST00000552352 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPH3A-223ENST00000552352 UHRF1BP1LA0JNW5 1464 aa11.08□□□□□ -0.64
RPH3A-223ENST00000552352 ARHGEF5Q12774 1597 aa11.08□□□□□ -0.64
RPH3A-223ENST00000552352 ABCC2Q92887 1545 aa11.07□□□□□ -0.64
RPH3A-223ENST00000552352 DENND4BO75064 1496 aaPredicted RBP11.07□□□□□ -0.64
RPH3A-223ENST00000552352 KDM6BO15054 1643 aa11.07□□□□□ -0.64
RPH3A-223ENST00000552352 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
RPH3A-223ENST00000552352 KDM5BQ9UGL1 1544 aa11.06□□□□□ -0.64
RPH3A-223ENST00000552352 PREX2Q70Z35 1606 aa11.05□□□□□ -0.64
RPH3A-223ENST00000552352 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
RPH3A-223ENST00000552352 CFDP1Q9UEE9 299 aaPredicted RBP11.04□□□□□ -0.64
RPH3A-223ENST00000552352 NCOA1Q15788 1441 aa11.04□□□□□ -0.64
RPH3A-223ENST00000552352 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
RPH3A-223ENST00000552352 NPM3O75607 178 aaKnown RBP11.03□□□□□ -0.64
RPH3A-223ENST00000552352 KDM5DQ9BY66 1539 aa11.01□□□□□ -0.65
RPH3A-223ENST00000552352 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
RPH3A-223ENST00000552352 RRP7BPQ9NSQ0 103 aa11.01□□□□□ -0.65
RPH3A-223ENST00000552352 MAST1Q9Y2H9 1570 aa11.01□□□□□ -0.65
RPH3A-223ENST00000552352 ANKRD30AQ9BXX3 1397 aa11.01□□□□□ -0.65
RPH3A-223ENST00000552352 WASHC2AQ641Q2 1341 aa11□□□□□ -0.65
RPH3A-223ENST00000552352 ZNF644Q9H582 1327 aaPredicted RBP11□□□□□ -0.65
RPH3A-223ENST00000552352 ERCC6L2Q5T890 1561 aa11□□□□□ -0.65
RPH3A-223ENST00000552352 MBD5Q9P267 1494 aa11□□□□□ -0.65
RPH3A-223ENST00000552352 CNTLNQ9NXG0 1405 aa10.99□□□□□ -0.65
RPH3A-223ENST00000552352 CDC42BPBQ9Y5S2 1711 aa10.99□□□□□ -0.65
RPH3A-223ENST00000552352 PLEKHH2Q8IVE3 1493 aa10.99□□□□□ -0.65
RPH3A-223ENST00000552352 RSPH4AQ5TD94 716 aa10.99□□□□□ -0.65
RPH3A-223ENST00000552352 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
RPH3A-223ENST00000552352 CHIC2Q9UKJ5 165 aa10.99□□□□□ -0.65
RPH3A-223ENST00000552352 PZPP20742 1482 aa10.99□□□□□ -0.65
RPH3A-223ENST00000552352 SAMD9LQ8IVG5 1584 aa10.98□□□□□ -0.65
RPH3A-223ENST00000552352 ARAP3Q8WWN8 1544 aa10.98□□□□□ -0.65
RPH3A-223ENST00000552352 ANKRD30BQ9BXX2 1392 aa10.98□□□□□ -0.65
RPH3A-223ENST00000552352 C9orf84Q5VXU9 1444 aa10.98□□□□□ -0.65
RPH3A-223ENST00000552352 MPHOSPH9Q99550 1183 aa10.98□□□□□ -0.65
RPH3A-223ENST00000552352 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
RPH3A-223ENST00000552352 KIAA1107Q9UPP5 1409 aa10.97□□□□□ -0.65
RPH3A-223ENST00000552352 CCDC141Q6ZP82 1450 aa10.97□□□□□ -0.65
RPH3A-223ENST00000552352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
RPH3A-223ENST00000552352 HSPA5P11021 654 aaKnown RBP10.97□□□□□ -0.65
RPH3A-223ENST00000552352 MAPK8IP2Q13387 824 aaPredicted RBP10.97□□□□□ -0.65
RPH3A-223ENST00000552352 CNKSR2Q8WXI2 1034 aa10.97□□□□□ -0.65
RPH3A-223ENST00000552352 ZCCHC11Q5TAX3 1644 aaKnown RBP10.96□□□□□ -0.65
RPH3A-223ENST00000552352 DEKP35659 375 aaKnown RBP10.96□□□□□ -0.65
RPH3A-223ENST00000552352 TTC37Q6PGP7 1564 aa10.96□□□□□ -0.66
RPH3A-223ENST00000552352 MYO5CQ9NQX4 1742 aa10.96□□□□□ -0.66
RPH3A-223ENST00000552352 ZBED9Q6R2W3 1325 aa10.96□□□□□ -0.66
RPH3A-223ENST00000552352 ANKRD50Q9ULJ7 1429 aa10.95□□□□□ -0.66
RPH3A-223ENST00000552352 PLXNC1O60486 1568 aa10.95□□□□□ -0.66
RPH3A-223ENST00000552352 TEX14Q8IWB6 1497 aa10.94□□□□□ -0.66
RPH3A-223ENST00000552352 EIF4G2P78344 907 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPH3A-223ENST00000552352 NOP58Q9Y2X3 529 aaKnown RBP10.94□□□□□ -0.66
RPH3A-223ENST00000552352 B4GALNT3Q6L9W6 998 aa10.93□□□□□ -0.66
RPH3A-223ENST00000552352 CCDC184Q52MB2 194 aa10.92□□□□□ -0.66
RPH3A-223ENST00000552352 PRKRIP1Q9H875 184 aaPredicted RBP10.92□□□□□ -0.66
RPH3A-223ENST00000552352 PLCH2O75038 1416 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms