RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 CTTNBP2Q8WZ74 1663 aa20.02■□□□□ 0.79
RBFOX1-214ENST00000552089 CFAP74Q9C0B2 1584 aa20.01■□□□□ 0.79
RBFOX1-214ENST00000552089 NCOA1Q15788 1441 aa20.01■□□□□ 0.79
RBFOX1-214ENST00000552089 HECW1Q76N89 1606 aa20■□□□□ 0.79
RBFOX1-214ENST00000552089 HSPA1LP34931 641 aa20■□□□□ 0.79
RBFOX1-214ENST00000552089 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-214ENST00000552089 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
RBFOX1-214ENST00000552089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
RBFOX1-214ENST00000552089 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
RBFOX1-214ENST00000552089 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
RBFOX1-214ENST00000552089 ATP10AO60312 1499 aa19.95■□□□□ 0.78
RBFOX1-214ENST00000552089 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
RBFOX1-214ENST00000552089 SETD1BQ9UPS6 1966 aaKnown RBP19.93■□□□□ 0.78
RBFOX1-214ENST00000552089 PIP4K2BP78356 416 aa19.89■□□□□ 0.77
RBFOX1-214ENST00000552089 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
RBFOX1-214ENST00000552089 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
RBFOX1-214ENST00000552089 RAPGEF6Q8TEU7 1601 aa19.87■□□□□ 0.77
RBFOX1-214ENST00000552089 C3P01024 1663 aa19.87■□□□□ 0.77
RBFOX1-214ENST00000552089 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
RBFOX1-214ENST00000552089 TRAPPC8Q9Y2L5 1435 aa19.86■□□□□ 0.77
RBFOX1-214ENST00000552089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.85■□□□□ 0.77
RBFOX1-214ENST00000552089 NCKAP5LQ9HCH0 1330 aa19.84■□□□□ 0.77
RBFOX1-214ENST00000552089 NUP153P49790 1475 aaKnown RBP19.81■□□□□ 0.76
RBFOX1-214ENST00000552089 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
RBFOX1-214ENST00000552089 TOM1O60784 492 aa19.77■□□□□ 0.76
RBFOX1-214ENST00000552089 ESF1Q9H501 851 aaKnown RBP19.76■□□□□ 0.75
RBFOX1-214ENST00000552089 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
RBFOX1-214ENST00000552089 PKD2Q13563 968 aa19.71■□□□□ 0.75
RBFOX1-214ENST00000552089 PLA2R1Q13018 1463 aa19.71■□□□□ 0.75
RBFOX1-214ENST00000552089 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
RBFOX1-214ENST00000552089 DIP2CQ9Y2E4 1556 aa19.7■□□□□ 0.74
RBFOX1-214ENST00000552089 SAMD9Q5K651 1589 aa19.69■□□□□ 0.74
RBFOX1-214ENST00000552089 REREQ9P2R6 1566 aa19.69■□□□□ 0.74
RBFOX1-214ENST00000552089 PLCH2O75038 1416 aa19.69■□□□□ 0.74
RBFOX1-214ENST00000552089 NPATQ14207 1427 aa19.69■□□□□ 0.74
RBFOX1-214ENST00000552089 RGS17Q9UGC6 210 aaPredicted RBP19.69■□□□□ 0.74
RBFOX1-214ENST00000552089 TCOF1Q13428 1488 aaKnown RBP19.69■□□□□ 0.74
RBFOX1-214ENST00000552089 ZNF518AQ6AHZ1 1483 aa19.68■□□□□ 0.74
RBFOX1-214ENST00000552089 CNTLNQ9NXG0 1405 aa19.68■□□□□ 0.74
RBFOX1-214ENST00000552089 AGLP35573 1532 aa19.67■□□□□ 0.74
RBFOX1-214ENST00000552089 MYT1LQ9UL68 1186 aa19.67■□□□□ 0.74
RBFOX1-214ENST00000552089 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
RBFOX1-214ENST00000552089 CPS1P31327 1500 aa19.65■□□□□ 0.74
RBFOX1-214ENST00000552089 KDM5CP41229 1560 aa19.65■□□□□ 0.74
RBFOX1-214ENST00000552089 PRXQ9BXM0 1461 aa19.64■□□□□ 0.73
RBFOX1-214ENST00000552089 ABCA6Q8N139 1617 aa19.63■□□□□ 0.73
RBFOX1-214ENST00000552089 PTPRKQ15262 1439 aa19.62■□□□□ 0.73
RBFOX1-214ENST00000552089 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
RBFOX1-214ENST00000552089 ZNF142P52746 1687 aaPredicted RBP19.61■□□□□ 0.73
RBFOX1-214ENST00000552089 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
RBFOX1-214ENST00000552089 ALKQ9UM73 1620 aa19.61■□□□□ 0.73
RBFOX1-214ENST00000552089 MYO3AQ8NEV4 1616 aa19.6■□□□□ 0.73
RBFOX1-214ENST00000552089 CEP170BQ9Y4F5 1589 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-214ENST00000552089 SHANK2Q9UPX8 1470 aa19.58■□□□□ 0.72
RBFOX1-214ENST00000552089 MROH2AA6NES4 1674 aa19.57■□□□□ 0.72
RBFOX1-214ENST00000552089 SUPT6HQ7KZ85 1726 aaKnown RBP19.56■□□□□ 0.72
RBFOX1-214ENST00000552089 POTEAQ6S8J7 498 aa19.55■□□□□ 0.72
RBFOX1-214ENST00000552089 ZMYM3Q14202 1370 aa19.55■□□□□ 0.72
RBFOX1-214ENST00000552089 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
RBFOX1-214ENST00000552089 MLH3Q9UHC1 1453 aa19.54■□□□□ 0.72
RBFOX1-214ENST00000552089 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
RBFOX1-214ENST00000552089 SETD1AO15047 1707 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-214ENST00000552089 ARHGAP5Q13017 1502 aa19.49■□□□□ 0.71
RBFOX1-214ENST00000552089 NEURL4Q96JN8 1562 aa19.46■□□□□ 0.71
RBFOX1-214ENST00000552089 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-214ENST00000552089 VWDEQ8N2E2 1590 aa19.46■□□□□ 0.7
RBFOX1-214ENST00000552089 A2ML1A8K2U0 1454 aa19.43■□□□□ 0.7
RBFOX1-214ENST00000552089 POLR1AO95602 1720 aaPredicted RBP19.42■□□□□ 0.7
RBFOX1-214ENST00000552089 CLTCQ00610 1675 aaKnown RBP19.42■□□□□ 0.7
RBFOX1-214ENST00000552089 SRCAPQ6ZRS2 3230 aa19.42■□□□□ 0.7
RBFOX1-214ENST00000552089 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
RBFOX1-214ENST00000552089 KIF14Q15058 1648 aa19.4■□□□□ 0.7
RBFOX1-214ENST00000552089 RNF17Q9BXT8 1623 aaKnown RBP19.4■□□□□ 0.7
RBFOX1-214ENST00000552089 KIDINS220Q9ULH0 1771 aa19.38■□□□□ 0.69
RBFOX1-214ENST00000552089 ABCC1P33527 1531 aa19.37■□□□□ 0.69
RBFOX1-214ENST00000552089 UPF1Q92900 1129 aaKnown RBP eCLIP19.36■□□□□ 0.69
RBFOX1-214ENST00000552089 LRRC7Q96NW7 1537 aa19.35■□□□□ 0.69
RBFOX1-214ENST00000552089 ITSN2Q9NZM3 1697 aa19.33■□□□□ 0.68
RBFOX1-214ENST00000552089 SYNMO15061 1565 aa19.31■□□□□ 0.68
RBFOX1-214ENST00000552089 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
RBFOX1-214ENST00000552089 ANKLE2Q86XL3 938 aa19.29■□□□□ 0.68
RBFOX1-214ENST00000552089 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
RBFOX1-214ENST00000552089 TROQ12816 1431 aaPredicted RBP19.28■□□□□ 0.68
RBFOX1-214ENST00000552089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.27■□□□□ 0.68
RBFOX1-214ENST00000552089 CDC42BPBQ9Y5S2 1711 aa19.27■□□□□ 0.68
RBFOX1-214ENST00000552089 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
RBFOX1-214ENST00000552089 STRCP1A6NGW2 1772 aa19.26■□□□□ 0.67
RBFOX1-214ENST00000552089 CLIP1P30622 1438 aa19.26■□□□□ 0.67
RBFOX1-214ENST00000552089 MED14O60244 1454 aa19.26■□□□□ 0.67
RBFOX1-214ENST00000552089 GGT6Q6P531 493 aa19.25■□□□□ 0.67
RBFOX1-214ENST00000552089 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
RBFOX1-214ENST00000552089 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
RBFOX1-214ENST00000552089 PREX2Q70Z35 1606 aa19.24■□□□□ 0.67
RBFOX1-214ENST00000552089 TNRQ92752 1358 aa19.24■□□□□ 0.67
RBFOX1-214ENST00000552089 DEPDC5O75140 1603 aa19.23■□□□□ 0.67
RBFOX1-214ENST00000552089 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
RBFOX1-214ENST00000552089 IQGAP1P46940 1657 aa19.22■□□□□ 0.67
RBFOX1-214ENST00000552089 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
RBFOX1-214ENST00000552089 A2MP01023 1474 aa19.2■□□□□ 0.66
RBFOX1-214ENST00000552089 EEA1Q15075 1411 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms