RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 UGGT2Q9NYU1 1516 aa9.3□□□□□ -0.92
PTPRR-211ENST00000551219 GCC2Q8IWJ2 1684 aa9.29□□□□□ -0.92
PTPRR-211ENST00000551219 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
PTPRR-211ENST00000551219 ABCA5Q8WWZ7 1642 aa9.29□□□□□ -0.92
PTPRR-211ENST00000551219 CNKSR2Q8WXI2 1034 aa9.28□□□□□ -0.92
PTPRR-211ENST00000551219 HIRIP3Q9BW71 556 aaPredicted RBP9.27□□□□□ -0.93
PTPRR-211ENST00000551219 LRRIQ1Q96JM4 1722 aa9.27□□□□□ -0.93
PTPRR-211ENST00000551219 LAMC3Q9Y6N6 1575 aa9.26□□□□□ -0.93
PTPRR-211ENST00000551219 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
PTPRR-211ENST00000551219 PIAS4Q8N2W9 510 aaPredicted RBP9.25□□□□□ -0.93
PTPRR-211ENST00000551219 CNTLNQ9NXG0 1405 aa9.25□□□□□ -0.93
PTPRR-211ENST00000551219 MIA2Q96PC5 1412 aa9.25□□□□□ -0.93
PTPRR-211ENST00000551219 NBR1Q14596 966 aa9.24□□□□□ -0.93
PTPRR-211ENST00000551219 GAPVD1Q14C86 1478 aa9.24□□□□□ -0.93
PTPRR-211ENST00000551219 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRR-211ENST00000551219 CDK11AQ9UQ88 783 aaPredicted RBP9.23□□□□□ -0.93
PTPRR-211ENST00000551219 URB2Q14146 1524 aaKnown RBP9.23□□□□□ -0.93
PTPRR-211ENST00000551219 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRR-211ENST00000551219 HSPA5P11021 654 aaKnown RBP9.22□□□□□ -0.93
PTPRR-211ENST00000551219 WASHC2AQ641Q2 1341 aa9.22□□□□□ -0.93
PTPRR-211ENST00000551219 SLC4A2P04920 1241 aa9.21□□□□□ -0.93
PTPRR-211ENST00000551219 NCOA1Q15788 1441 aa9.21□□□□□ -0.93
PTPRR-211ENST00000551219 MAGI3Q5TCQ9 1506 aa9.21□□□□□ -0.94
PTPRR-211ENST00000551219 DENND4BO75064 1496 aaPredicted RBP9.21□□□□□ -0.94
PTPRR-211ENST00000551219 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
PTPRR-211ENST00000551219 PPP4R2Q9NY27 417 aa9.2□□□□□ -0.94
PTPRR-211ENST00000551219 ROCK1Q13464 1354 aa9.2□□□□□ -0.94
PTPRR-211ENST00000551219 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.19□□□□□ -0.94
PTPRR-211ENST00000551219 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
PTPRR-211ENST00000551219 NESP48681 1621 aa9.19□□□□□ -0.94
PTPRR-211ENST00000551219 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
PTPRR-211ENST00000551219 CCDC7Q96M83 1385 aa9.18□□□□□ -0.94
PTPRR-211ENST00000551219 EPRSP07814 1512 aaKnown RBP9.18□□□□□ -0.94
PTPRR-211ENST00000551219 PDS5BQ9NTI5 1447 aa9.18□□□□□ -0.94
PTPRR-211ENST00000551219 RPRD2Q5VT52 1461 aaKnown RBP9.17□□□□□ -0.94
PTPRR-211ENST00000551219 TDRD9Q8NDG6 1382 aaKnown RBP9.17□□□□□ -0.94
PTPRR-211ENST00000551219 ZBED9Q6R2W3 1325 aa9.17□□□□□ -0.94
PTPRR-211ENST00000551219 ERICH6Q7L0X2 663 aa9.17□□□□□ -0.94
PTPRR-211ENST00000551219 BCL11AQ9H165 835 aa9.17□□□□□ -0.94
PTPRR-211ENST00000551219 MPHOSPH9Q99550 1183 aa9.17□□□□□ -0.94
PTPRR-211ENST00000551219 IQGAP2Q13576 1575 aa9.17□□□□□ -0.94
PTPRR-211ENST00000551219 WDR62O43379 1518 aa9.17□□□□□ -0.94
PTPRR-211ENST00000551219 POLR1AO95602 1720 aaPredicted RBP9.16□□□□□ -0.94
PTPRR-211ENST00000551219 RRP7BPQ9NSQ0 103 aa9.16□□□□□ -0.94
PTPRR-211ENST00000551219 TEX14Q8IWB6 1497 aa9.16□□□□□ -0.94
PTPRR-211ENST00000551219 KDM6BO15054 1643 aa9.16□□□□□ -0.94
PTPRR-211ENST00000551219 PRKRIP1Q9H875 184 aaPredicted RBP9.15□□□□□ -0.94
PTPRR-211ENST00000551219 TARBP1Q13395 1621 aaKnown RBP9.15□□□□□ -0.94
PTPRR-211ENST00000551219 ANKRD30BQ9BXX2 1392 aa9.15□□□□□ -0.94
PTPRR-211ENST00000551219 MSH5O43196 834 aa9.15□□□□□ -0.95
PTPRR-211ENST00000551219 DNMT1P26358 1616 aaKnown RBP9.14□□□□□ -0.95
PTPRR-211ENST00000551219 DAPK1P53355 1430 aa9.14□□□□□ -0.95
PTPRR-211ENST00000551219 L3MBTL2Q969R5 705 aa9.14□□□□□ -0.95
PTPRR-211ENST00000551219 ADAMTS12P58397 1594 aa9.13□□□□□ -0.95
PTPRR-211ENST00000551219 SPATA31E1Q6ZUB1 1445 aa9.13□□□□□ -0.95
PTPRR-211ENST00000551219 PBRM1Q86U86 1689 aa9.13□□□□□ -0.95
PTPRR-211ENST00000551219 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
PTPRR-211ENST00000551219 MRS2Q9HD23 443 aa9.12□□□□□ -0.95
PTPRR-211ENST00000551219 CHIC2Q9UKJ5 165 aa9.12□□□□□ -0.95
PTPRR-211ENST00000551219 CDK13Q14004 1512 aaKnown RBP9.11□□□□□ -0.95
PTPRR-211ENST00000551219 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
PTPRR-211ENST00000551219 ATF5Q9Y2D1 282 aaPredicted RBP9.11□□□□□ -0.95
PTPRR-211ENST00000551219 ABCC5O15440 1437 aa9.1□□□□□ -0.95
PTPRR-211ENST00000551219 IRX6P78412 446 aaPredicted RBP9.1□□□□□ -0.95
PTPRR-211ENST00000551219 ARID4BQ4LE39 1312 aaPredicted RBP9.1□□□□□ -0.95
PTPRR-211ENST00000551219 KIF7Q2M1P5 1343 aa9.1□□□□□ -0.95
PTPRR-211ENST00000551219 MBD5Q9P267 1494 aa9.09□□□□□ -0.95
PTPRR-211ENST00000551219 VASPP50552 380 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-211ENST00000551219 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-211ENST00000551219 CCDC184Q52MB2 194 aa9.09□□□□□ -0.95
PTPRR-211ENST00000551219 MAPK8IP2Q13387 824 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-211ENST00000551219 FAM9BQ8IZU0 186 aa9.08□□□□□ -0.96
PTPRR-211ENST00000551219 NBPF8Q3BBV2 869 aa9.08□□□□□ -0.96
PTPRR-211ENST00000551219 ARID3AQ99856 593 aa9.07□□□□□ -0.96
PTPRR-211ENST00000551219 KIF14Q15058 1648 aa9.07□□□□□ -0.96
PTPRR-211ENST00000551219 ADGBQ8N7X0 1667 aa9.07□□□□□ -0.96
PTPRR-211ENST00000551219 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
PTPRR-211ENST00000551219 KIAA0556O60303 1618 aa9.07□□□□□ -0.96
PTPRR-211ENST00000551219 ADGRL2O95490 1459 aa9.07□□□□□ -0.96
PTPRR-211ENST00000551219 PZPP20742 1482 aa9.07□□□□□ -0.96
PTPRR-211ENST00000551219 RNF123Q5XPI4 1314 aa9.06□□□□□ -0.96
PTPRR-211ENST00000551219 ITSN2Q9NZM3 1697 aa9.06□□□□□ -0.96
PTPRR-211ENST00000551219 DHX29Q7Z478 1369 aaKnown RBP9.06□□□□□ -0.96
PTPRR-211ENST00000551219 RAPGEF6Q8TEU7 1601 aa9.06□□□□□ -0.96
PTPRR-211ENST00000551219 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
PTPRR-211ENST00000551219 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
PTPRR-211ENST00000551219 NUDCQ9Y266 331 aa9.05□□□□□ -0.96
PTPRR-211ENST00000551219 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
PTPRR-211ENST00000551219 NUP153P49790 1475 aaKnown RBP9.05□□□□□ -0.96
PTPRR-211ENST00000551219 B4GALNT3Q6L9W6 998 aa9.04□□□□□ -0.96
PTPRR-211ENST00000551219 UHRF1BP1Q6BDS2 1440 aa9.04□□□□□ -0.96
PTPRR-211ENST00000551219 KTN1Q86UP2 1357 aaKnown RBP9.04□□□□□ -0.96
PTPRR-211ENST00000551219 TROQ12816 1431 aaPredicted RBP9.03□□□□□ -0.96
PTPRR-211ENST00000551219 DISP1Q96F81 1524 aa9.03□□□□□ -0.96
PTPRR-211ENST00000551219 USP47Q96K76 1375 aa9.03□□□□□ -0.96
PTPRR-211ENST00000551219 ADCY10Q96PN6 1610 aa9.03□□□□□ -0.96
PTPRR-211ENST00000551219 CAMSAP2Q08AD1 1489 aa9.03□□□□□ -0.96
PTPRR-211ENST00000551219 KDM5CP41229 1560 aa9.03□□□□□ -0.96
PTPRR-211ENST00000551219 CROCC2H7BZ55 1655 aa9.03□□□□□ -0.96
PTPRR-211ENST00000551219 ARHGEF12Q9NZN5 1544 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms