RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 CEBPAP49715 358 aaPredicted RBP17.44■□□□□ 0.38
BEST3-210ENST00000551160 ARHGEF12Q9NZN5 1544 aa17.43■□□□□ 0.38
BEST3-210ENST00000551160 SCAPERQ9BY12 1400 aa17.42■□□□□ 0.38
BEST3-210ENST00000551160 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
BEST3-210ENST00000551160 FER1L4A9Z1Z3 1794 aa17.41■□□□□ 0.38
BEST3-210ENST00000551160 C9orf84Q5VXU9 1444 aa17.39■□□□□ 0.38
BEST3-210ENST00000551160 ATP10AO60312 1499 aa17.39■□□□□ 0.37
BEST3-210ENST00000551160 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
BEST3-210ENST00000551160 PLCH2O75038 1416 aa17.37■□□□□ 0.37
BEST3-210ENST00000551160 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
BEST3-210ENST00000551160 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
BEST3-210ENST00000551160 UHRF1BP1Q6BDS2 1440 aa17.36■□□□□ 0.37
BEST3-210ENST00000551160 PREX1Q8TCU6 1659 aa17.36■□□□□ 0.37
BEST3-210ENST00000551160 STRCQ7RTU9 1775 aa17.33■□□□□ 0.37
BEST3-210ENST00000551160 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
BEST3-210ENST00000551160 PTPRTO14522 1441 aa17.3■□□□□ 0.36
BEST3-210ENST00000551160 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
BEST3-210ENST00000551160 ZNF518AQ6AHZ1 1483 aa17.26■□□□□ 0.35
BEST3-210ENST00000551160 LTBP4Q8N2S1 1624 aa17.26■□□□□ 0.35
BEST3-210ENST00000551160 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
BEST3-210ENST00000551160 KDM5CP41229 1560 aa17.23■□□□□ 0.35
BEST3-210ENST00000551160 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
BEST3-210ENST00000551160 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
BEST3-210ENST00000551160 EEA1Q15075 1411 aa17.21■□□□□ 0.35
BEST3-210ENST00000551160 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
BEST3-210ENST00000551160 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.35
BEST3-210ENST00000551160 KIF14Q15058 1648 aa17.21■□□□□ 0.35
BEST3-210ENST00000551160 TRAPPC8Q9Y2L5 1435 aa17.2■□□□□ 0.34
BEST3-210ENST00000551160 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
BEST3-210ENST00000551160 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
BEST3-210ENST00000551160 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
BEST3-210ENST00000551160 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
BEST3-210ENST00000551160 C3P01024 1663 aa17.17■□□□□ 0.34
BEST3-210ENST00000551160 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
BEST3-210ENST00000551160 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
BEST3-210ENST00000551160 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
BEST3-210ENST00000551160 MLH3Q9UHC1 1453 aa17.16■□□□□ 0.34
BEST3-210ENST00000551160 AGLP35573 1532 aa17.16■□□□□ 0.34
BEST3-210ENST00000551160 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
BEST3-210ENST00000551160 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
BEST3-210ENST00000551160 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
BEST3-210ENST00000551160 UBAP1LF5GYI3 381 aa17.13■□□□□ 0.33
BEST3-210ENST00000551160 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
BEST3-210ENST00000551160 CAMSAP1Q5T5Y3 1602 aa17.12■□□□□ 0.33
BEST3-210ENST00000551160 NCKAP5LQ9HCH0 1330 aa17.12■□□□□ 0.33
BEST3-210ENST00000551160 CLIP1P30622 1438 aa17.12■□□□□ 0.33
BEST3-210ENST00000551160 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
BEST3-210ENST00000551160 ARHGAP35Q9NRY4 1499 aa17.11■□□□□ 0.33
BEST3-210ENST00000551160 ABCC1P33527 1531 aa17.1■□□□□ 0.33
BEST3-210ENST00000551160 NPATQ14207 1427 aa17.09■□□□□ 0.33
BEST3-210ENST00000551160 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
BEST3-210ENST00000551160 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
BEST3-210ENST00000551160 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
BEST3-210ENST00000551160 KIDINS220Q9ULH0 1771 aa17.03■□□□□ 0.32
BEST3-210ENST00000551160 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
BEST3-210ENST00000551160 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.32
BEST3-210ENST00000551160 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
BEST3-210ENST00000551160 TCOF1Q13428 1488 aaKnown RBP17.01■□□□□ 0.31
BEST3-210ENST00000551160 PKD2Q13563 968 aa17.01■□□□□ 0.31
BEST3-210ENST00000551160 SAMD9LQ8IVG5 1584 aa16.99■□□□□ 0.31
BEST3-210ENST00000551160 PTPRKQ15262 1439 aa16.99■□□□□ 0.31
BEST3-210ENST00000551160 HSPA1LP34931 641 aa16.99■□□□□ 0.31
BEST3-210ENST00000551160 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
BEST3-210ENST00000551160 MROH2AA6NES4 1674 aa16.98■□□□□ 0.31
BEST3-210ENST00000551160 ZNF777Q9ULD5 760 aaPredicted RBP16.98■□□□□ 0.31
BEST3-210ENST00000551160 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
BEST3-210ENST00000551160 MYO3AQ8NEV4 1616 aa16.98■□□□□ 0.31
BEST3-210ENST00000551160 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
BEST3-210ENST00000551160 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
BEST3-210ENST00000551160 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
BEST3-210ENST00000551160 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
BEST3-210ENST00000551160 PIP4K2BP78356 416 aa16.96■□□□□ 0.31
BEST3-210ENST00000551160 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.3
BEST3-210ENST00000551160 ZNF142P52746 1687 aaPredicted RBP16.95■□□□□ 0.3
BEST3-210ENST00000551160 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.3
BEST3-210ENST00000551160 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
BEST3-210ENST00000551160 GGT6Q6P531 493 aa16.93■□□□□ 0.3
BEST3-210ENST00000551160 CASKIN1Q8WXD9 1431 aa16.93■□□□□ 0.3
BEST3-210ENST00000551160 CLTCQ00610 1675 aaKnown RBP16.92■□□□□ 0.3
BEST3-210ENST00000551160 PLXNC1O60486 1568 aa16.92■□□□□ 0.3
BEST3-210ENST00000551160 A2MP01023 1474 aa16.92■□□□□ 0.3
BEST3-210ENST00000551160 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
BEST3-210ENST00000551160 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
BEST3-210ENST00000551160 GPATCH8Q9UKJ3 1502 aaKnown RBP16.91■□□□□ 0.3
BEST3-210ENST00000551160 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
BEST3-210ENST00000551160 A2ML1A8K2U0 1454 aa16.89■□□□□ 0.29
BEST3-210ENST00000551160 TOM1O60784 492 aa16.88■□□□□ 0.29
BEST3-210ENST00000551160 INO80Q9ULG1 1556 aaPredicted RBP16.87■□□□□ 0.29
BEST3-210ENST00000551160 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
BEST3-210ENST00000551160 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
BEST3-210ENST00000551160 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
BEST3-210ENST00000551160 CPS1P31327 1500 aa16.86■□□□□ 0.29
BEST3-210ENST00000551160 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
BEST3-210ENST00000551160 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
BEST3-210ENST00000551160 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
BEST3-210ENST00000551160 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.28
BEST3-210ENST00000551160 PLEKHH2Q8IVE3 1493 aa16.83■□□□□ 0.28
BEST3-210ENST00000551160 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
BEST3-210ENST00000551160 TNRQ92752 1358 aa16.82■□□□□ 0.28
BEST3-210ENST00000551160 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms