RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
PTPRR-210ENST00000550661 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
PTPRR-210ENST00000550661 PKD2Q13563 968 aa9.85□□□□□ -0.83
PTPRR-210ENST00000550661 ZNF467Q7Z7K2 595 aaPredicted RBP9.85□□□□□ -0.83
PTPRR-210ENST00000550661 PRXQ9BXM0 1461 aa9.85□□□□□ -0.83
PTPRR-210ENST00000550661 ECM2O94769 699 aaPredicted RBP9.84□□□□□ -0.83
PTPRR-210ENST00000550661 CHD1O14646 1710 aa9.84□□□□□ -0.83
PTPRR-210ENST00000550661 CARMIL1Q5VZK9 1371 aa9.83□□□□□ -0.84
PTPRR-210ENST00000550661 RAPGEF2Q9Y4G8 1499 aa9.83□□□□□ -0.84
PTPRR-210ENST00000550661 KIF21BO75037 1637 aa9.82□□□□□ -0.84
PTPRR-210ENST00000550661 TIE1P35590 1138 aa9.82□□□□□ -0.84
PTPRR-210ENST00000550661 NUP160Q12769 1436 aa9.82□□□□□ -0.84
PTPRR-210ENST00000550661 BMP2KQ9NSY1 1161 aaPredicted RBP9.81□□□□□ -0.84
PTPRR-210ENST00000550661 ATMINO43313 823 aaPredicted RBP9.8□□□□□ -0.84
PTPRR-210ENST00000550661 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
PTPRR-210ENST00000550661 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
PTPRR-210ENST00000550661 CEP170Q5SW79 1584 aa9.79□□□□□ -0.84
PTPRR-210ENST00000550661 CLASP1Q7Z460 1538 aa9.78□□□□□ -0.84
PTPRR-210ENST00000550661 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
PTPRR-210ENST00000550661 GOLGA3Q08378 1498 aa9.78□□□□□ -0.84
PTPRR-210ENST00000550661 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
PTPRR-210ENST00000550661 ATN1P54259 1190 aaPredicted RBP9.77□□□□□ -0.85
PTPRR-210ENST00000550661 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
PTPRR-210ENST00000550661 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
PTPRR-210ENST00000550661 PSEN1P49768 467 aa9.76□□□□□ -0.85
PTPRR-210ENST00000550661 FAM9AQ8IZU1 332 aaPredicted RBP9.76□□□□□ -0.85
PTPRR-210ENST00000550661 PDAP1Q13442 181 aaKnown RBP9.75□□□□□ -0.85
PTPRR-210ENST00000550661 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
PTPRR-210ENST00000550661 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
PTPRR-210ENST00000550661 CTTNBP2Q8WZ74 1663 aa9.74□□□□□ -0.85
PTPRR-210ENST00000550661 IQGAP2Q13576 1575 aa9.73□□□□□ -0.85
PTPRR-210ENST00000550661 RGL2O15211 777 aa9.73□□□□□ -0.85
PTPRR-210ENST00000550661 SHROOM2Q13796 1616 aa9.72□□□□□ -0.85
PTPRR-210ENST00000550661 TRIM35Q9UPQ4 493 aa9.72□□□□□ -0.85
PTPRR-210ENST00000550661 VGFO15240 615 aaPredicted RBP9.7□□□□□ -0.86
PTPRR-210ENST00000550661 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
PTPRR-210ENST00000550661 SLC39A7Q92504 469 aa9.69□□□□□ -0.86
PTPRR-210ENST00000550661 TAOK2Q9UL54 1235 aa9.69□□□□□ -0.86
PTPRR-210ENST00000550661 UGGT2Q9NYU1 1516 aa9.68□□□□□ -0.86
PTPRR-210ENST00000550661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-210ENST00000550661 C7P10643 843 aa9.67□□□□□ -0.86
PTPRR-210ENST00000550661 ZFP91Q96JP5 570 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-210ENST00000550661 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
PTPRR-210ENST00000550661 GOLGA2Q08379 1002 aa9.66□□□□□ -0.86
PTPRR-210ENST00000550661 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
PTPRR-210ENST00000550661 ARHGEF11O15085 1522 aa9.66□□□□□ -0.86
PTPRR-210ENST00000550661 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
PTPRR-210ENST00000550661 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
PTPRR-210ENST00000550661 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
PTPRR-210ENST00000550661 SAMD9Q5K651 1589 aa9.64□□□□□ -0.87
PTPRR-210ENST00000550661 CABP2Q9NPB3 220 aa9.64□□□□□ -0.87
PTPRR-210ENST00000550661 CARMIL2Q6F5E8 1435 aa9.64□□□□□ -0.87
PTPRR-210ENST00000550661 PRG4Q92954 1404 aaPredicted RBP9.64□□□□□ -0.87
PTPRR-210ENST00000550661 DISP1Q96F81 1524 aa9.63□□□□□ -0.87
PTPRR-210ENST00000550661 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
PTPRR-210ENST00000550661 IER5LQ5T953 404 aa9.63□□□□□ -0.87
PTPRR-210ENST00000550661 UBTFP17480 764 aaKnown RBP9.62□□□□□ -0.87
PTPRR-210ENST00000550661 JPH4Q96JJ6 628 aa9.62□□□□□ -0.87
PTPRR-210ENST00000550661 RIMBP3CA6NJZ7 1639 aa9.61□□□□□ -0.87
PTPRR-210ENST00000550661 RIMBP3BA6NNM3 1639 aa9.61□□□□□ -0.87
PTPRR-210ENST00000550661 RIMBP3Q9UFD9 1639 aa9.61□□□□□ -0.87
PTPRR-210ENST00000550661 SEC24BO95487 1268 aa9.61□□□□□ -0.87
PTPRR-210ENST00000550661 ERCC6L2Q5T890 1561 aa9.6□□□□□ -0.87
PTPRR-210ENST00000550661 STK25O00506 426 aa9.6□□□□□ -0.87
PTPRR-210ENST00000550661 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
PTPRR-210ENST00000550661 DNAJC5Q9H3Z4 198 aa9.6□□□□□ -0.87
PTPRR-210ENST00000550661 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
PTPRR-210ENST00000550661 ARAP1Q96P48 1450 aa9.59□□□□□ -0.87
PTPRR-210ENST00000550661 CEP162Q5TB80 1403 aa9.58□□□□□ -0.88
PTPRR-210ENST00000550661 COLQQ9Y215 455 aaPredicted RBP9.58□□□□□ -0.88
PTPRR-210ENST00000550661 ARHGAP35Q9NRY4 1499 aa9.58□□□□□ -0.88
PTPRR-210ENST00000550661 CLIP1P30622 1438 aa9.57□□□□□ -0.88
PTPRR-210ENST00000550661 POTEFA5A3E0 1075 aa9.57□□□□□ -0.88
PTPRR-210ENST00000550661 PLCG2P16885 1265 aa9.57□□□□□ -0.88
PTPRR-210ENST00000550661 IRX5P78411 483 aaPredicted RBP9.57□□□□□ -0.88
PTPRR-210ENST00000550661 LHX8Q68G74 356 aa9.57□□□□□ -0.88
PTPRR-210ENST00000550661 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
PTPRR-210ENST00000550661 OCEL1Q9H607 264 aa9.55□□□□□ -0.88
PTPRR-210ENST00000550661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTPRR-210ENST00000550661 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
PTPRR-210ENST00000550661 POTEB2H3BUK9 544 aa9.54□□□□□ -0.88
PTPRR-210ENST00000550661 CHGAP10645 457 aaKnown RBP9.54□□□□□ -0.88
PTPRR-210ENST00000550661 PTPRGP23470 1445 aa9.54□□□□□ -0.88
PTPRR-210ENST00000550661 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
PTPRR-210ENST00000550661 LOC105371045A0A1W2PR82 267 aa9.52□□□□□ -0.89
PTPRR-210ENST00000550661 UHRF1BP1LA0JNW5 1464 aa9.52□□□□□ -0.89
PTPRR-210ENST00000550661 ABCC2Q92887 1545 aa9.51□□□□□ -0.89
PTPRR-210ENST00000550661 ABCA8O94911 1581 aa9.51□□□□□ -0.89
PTPRR-210ENST00000550661 HS6ST3Q8IZP7 471 aa9.51□□□□□ -0.89
PTPRR-210ENST00000550661 UACAQ9BZF9 1416 aa9.5□□□□□ -0.89
PTPRR-210ENST00000550661 SOX12O15370 315 aa9.5□□□□□ -0.89
PTPRR-210ENST00000550661 RANGAP1P46060 587 aaPredicted RBP9.5□□□□□ -0.89
PTPRR-210ENST00000550661 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
PTPRR-210ENST00000550661 ADCY10Q96PN6 1610 aa9.49□□□□□ -0.89
PTPRR-210ENST00000550661 PLB1Q6P1J6 1458 aa9.49□□□□□ -0.89
PTPRR-210ENST00000550661 HECW1Q76N89 1606 aa9.49□□□□□ -0.89
PTPRR-210ENST00000550661 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
PTPRR-210ENST00000550661 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
PTPRR-210ENST00000550661 PHF8Q9UPP1 1060 aa9.48□□□□□ -0.89
PTPRR-210ENST00000550661 PCF11O94913 1555 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms