RNA–Protein interactions for RNA: ENST00000550390.1

EIF4B-209, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 5

Gene EIF4B, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-209ENST00000550390 HECW1Q76N89 1606 aa14□□□□□ -0.17
EIF4B-209ENST00000550390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14□□□□□ -0.17
EIF4B-209ENST00000550390 FHOD3Q2V2M9 1422 aa13.99□□□□□ -0.17
EIF4B-209ENST00000550390 AKNAQ7Z591 1439 aa13.99□□□□□ -0.17
EIF4B-209ENST00000550390 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
EIF4B-209ENST00000550390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
EIF4B-209ENST00000550390 SOCS7O14512 581 aa13.97□□□□□ -0.17
EIF4B-209ENST00000550390 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
EIF4B-209ENST00000550390 ARHGEF12Q9NZN5 1544 aa13.95□□□□□ -0.18
EIF4B-209ENST00000550390 MLECQ14165 292 aa13.95□□□□□ -0.18
EIF4B-209ENST00000550390 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
EIF4B-209ENST00000550390 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
EIF4B-209ENST00000550390 MYO5CQ9NQX4 1742 aa13.9□□□□□ -0.18
EIF4B-209ENST00000550390 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
EIF4B-209ENST00000550390 C3P01024 1663 aa13.89□□□□□ -0.19
EIF4B-209ENST00000550390 C9orf84Q5VXU9 1444 aa13.88□□□□□ -0.19
EIF4B-209ENST00000550390 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
EIF4B-209ENST00000550390 SCAPERQ9BY12 1400 aa13.86□□□□□ -0.19
EIF4B-209ENST00000550390 SETD1BQ9UPS6 1966 aaKnown RBP13.85□□□□□ -0.19
EIF4B-209ENST00000550390 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
EIF4B-209ENST00000550390 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
EIF4B-209ENST00000550390 ATP10AO60312 1499 aa13.85□□□□□ -0.19
EIF4B-209ENST00000550390 KIF14Q15058 1648 aa13.84□□□□□ -0.19
EIF4B-209ENST00000550390 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
EIF4B-209ENST00000550390 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
EIF4B-209ENST00000550390 PLEKHD1A6NEE1 506 aa13.83□□□□□ -0.2
EIF4B-209ENST00000550390 KDM5CP41229 1560 aa13.82□□□□□ -0.2
EIF4B-209ENST00000550390 ARHGAP35Q9NRY4 1499 aa13.81□□□□□ -0.2
EIF4B-209ENST00000550390 PLCH2O75038 1416 aa13.8□□□□□ -0.2
EIF4B-209ENST00000550390 PTPRTO14522 1441 aa13.79□□□□□ -0.2
EIF4B-209ENST00000550390 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
EIF4B-209ENST00000550390 REREQ9P2R6 1566 aa13.78□□□□□ -0.2
EIF4B-209ENST00000550390 CLIP1P30622 1438 aa13.77□□□□□ -0.21
EIF4B-209ENST00000550390 CEP162Q5TB80 1403 aa13.77□□□□□ -0.21
EIF4B-209ENST00000550390 ZNF518AQ6AHZ1 1483 aa13.77□□□□□ -0.21
EIF4B-209ENST00000550390 CDC42BPBQ9Y5S2 1711 aa13.77□□□□□ -0.21
EIF4B-209ENST00000550390 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
EIF4B-209ENST00000550390 IQSEC2Q5JU85 1478 aa13.76□□□□□ -0.21
EIF4B-209ENST00000550390 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
EIF4B-209ENST00000550390 SUPT6HQ7KZ85 1726 aaKnown RBP13.76□□□□□ -0.21
EIF4B-209ENST00000550390 ITSN2Q9NZM3 1697 aa13.75□□□□□ -0.21
EIF4B-209ENST00000550390 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
EIF4B-209ENST00000550390 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
EIF4B-209ENST00000550390 KIDINS220Q9ULH0 1771 aa13.72□□□□□ -0.21
EIF4B-209ENST00000550390 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
EIF4B-209ENST00000550390 MROH2AA6NES4 1674 aa13.71□□□□□ -0.21
EIF4B-209ENST00000550390 ZNF142P52746 1687 aaPredicted RBP13.71□□□□□ -0.21
EIF4B-209ENST00000550390 ABCC1P33527 1531 aa13.7□□□□□ -0.22
EIF4B-209ENST00000550390 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
EIF4B-209ENST00000550390 AGLP35573 1532 aa13.69□□□□□ -0.22
EIF4B-209ENST00000550390 AFAP1Q8N556 730 aa13.69□□□□□ -0.22
EIF4B-209ENST00000550390 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
EIF4B-209ENST00000550390 TRAPPC8Q9Y2L5 1435 aa13.68□□□□□ -0.22
EIF4B-209ENST00000550390 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
EIF4B-209ENST00000550390 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
EIF4B-209ENST00000550390 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
EIF4B-209ENST00000550390 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
EIF4B-209ENST00000550390 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
EIF4B-209ENST00000550390 ZNF335Q9H4Z2 1342 aaPredicted RBP13.65□□□□□ -0.22
EIF4B-209ENST00000550390 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
EIF4B-209ENST00000550390 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
EIF4B-209ENST00000550390 CEP170BQ9Y4F5 1589 aaPredicted RBP13.63□□□□□ -0.23
EIF4B-209ENST00000550390 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
EIF4B-209ENST00000550390 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
EIF4B-209ENST00000550390 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
EIF4B-209ENST00000550390 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
EIF4B-209ENST00000550390 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
EIF4B-209ENST00000550390 POLR1AO95602 1720 aaPredicted RBP13.61□□□□□ -0.23
EIF4B-209ENST00000550390 ESF1Q9H501 851 aaKnown RBP13.61□□□□□ -0.23
EIF4B-209ENST00000550390 NPATQ14207 1427 aa13.6□□□□□ -0.23
EIF4B-209ENST00000550390 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
EIF4B-209ENST00000550390 TCOF1Q13428 1488 aaKnown RBP13.59□□□□□ -0.23
EIF4B-209ENST00000550390 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
EIF4B-209ENST00000550390 PLA2R1Q13018 1463 aa13.58□□□□□ -0.24
EIF4B-209ENST00000550390 PLXNC1O60486 1568 aa13.58□□□□□ -0.24
EIF4B-209ENST00000550390 VPS8Q8N3P4 1428 aa13.57□□□□□ -0.24
EIF4B-209ENST00000550390 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
EIF4B-209ENST00000550390 NEURL4Q96JN8 1562 aa13.55□□□□□ -0.24
EIF4B-209ENST00000550390 CDK11AQ9UQ88 783 aaPredicted RBP13.55□□□□□ -0.24
EIF4B-209ENST00000550390 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
EIF4B-209ENST00000550390 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
EIF4B-209ENST00000550390 FOXD1Q16676 465 aa13.54□□□□□ -0.24
EIF4B-209ENST00000550390 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
EIF4B-209ENST00000550390 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
EIF4B-209ENST00000550390 HSPA1LP34931 641 aa13.53□□□□□ -0.24
EIF4B-209ENST00000550390 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
EIF4B-209ENST00000550390 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
EIF4B-209ENST00000550390 ALKQ9UM73 1620 aa13.52□□□□□ -0.25
EIF4B-209ENST00000550390 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
EIF4B-209ENST00000550390 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
EIF4B-209ENST00000550390 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
EIF4B-209ENST00000550390 CCDC18Q5T9S5 1454 aa13.49□□□□□ -0.25
EIF4B-209ENST00000550390 PKD2Q13563 968 aa13.49□□□□□ -0.25
EIF4B-209ENST00000550390 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
EIF4B-209ENST00000550390 CPS1P31327 1500 aa13.49□□□□□ -0.25
EIF4B-209ENST00000550390 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
EIF4B-209ENST00000550390 A2MP01023 1474 aa13.48□□□□□ -0.25
EIF4B-209ENST00000550390 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
EIF4B-209ENST00000550390 VWDEQ8N2E2 1590 aa13.47□□□□□ -0.25
EIF4B-209ENST00000550390 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms