RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
LETMD1-219ENST00000549395 PTPRTO14522 1441 aa13.14□□□□□ -0.31
LETMD1-219ENST00000549395 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
LETMD1-219ENST00000549395 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
LETMD1-219ENST00000549395 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
LETMD1-219ENST00000549395 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
LETMD1-219ENST00000549395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
LETMD1-219ENST00000549395 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
LETMD1-219ENST00000549395 ATP10AO60312 1499 aa13.09□□□□□ -0.31
LETMD1-219ENST00000549395 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
LETMD1-219ENST00000549395 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
LETMD1-219ENST00000549395 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
LETMD1-219ENST00000549395 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
LETMD1-219ENST00000549395 SCAPERQ9BY12 1400 aa13.06□□□□□ -0.32
LETMD1-219ENST00000549395 C3P01024 1663 aa13.06□□□□□ -0.32
LETMD1-219ENST00000549395 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
LETMD1-219ENST00000549395 NCOA1Q15788 1441 aa13.02□□□□□ -0.33
LETMD1-219ENST00000549395 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-219ENST00000549395 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
LETMD1-219ENST00000549395 PLCH2O75038 1416 aa12.99□□□□□ -0.33
LETMD1-219ENST00000549395 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
LETMD1-219ENST00000549395 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
LETMD1-219ENST00000549395 RANGAP1P46060 587 aaPredicted RBP12.98□□□□□ -0.33
LETMD1-219ENST00000549395 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
LETMD1-219ENST00000549395 HSPA1LP34931 641 aa12.96□□□□□ -0.33
LETMD1-219ENST00000549395 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
LETMD1-219ENST00000549395 MYT1LQ9UL68 1186 aa12.96□□□□□ -0.33
LETMD1-219ENST00000549395 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
LETMD1-219ENST00000549395 NCKAP5LQ9HCH0 1330 aa12.95□□□□□ -0.34
LETMD1-219ENST00000549395 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
LETMD1-219ENST00000549395 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
LETMD1-219ENST00000549395 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
LETMD1-219ENST00000549395 ZNF518AQ6AHZ1 1483 aa12.94□□□□□ -0.34
LETMD1-219ENST00000549395 EFCAB2Q5VUJ9 269 aa12.94□□□□□ -0.34
LETMD1-219ENST00000549395 KDM5CP41229 1560 aa12.94□□□□□ -0.34
LETMD1-219ENST00000549395 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
LETMD1-219ENST00000549395 REREQ9P2R6 1566 aa12.93□□□□□ -0.34
LETMD1-219ENST00000549395 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
LETMD1-219ENST00000549395 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
LETMD1-219ENST00000549395 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
LETMD1-219ENST00000549395 AGLP35573 1532 aa12.9□□□□□ -0.34
LETMD1-219ENST00000549395 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
LETMD1-219ENST00000549395 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
LETMD1-219ENST00000549395 KIF14Q15058 1648 aa12.87□□□□□ -0.35
LETMD1-219ENST00000549395 NPATQ14207 1427 aa12.87□□□□□ -0.35
LETMD1-219ENST00000549395 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
LETMD1-219ENST00000549395 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
LETMD1-219ENST00000549395 PKD2Q13563 968 aa12.86□□□□□ -0.35
LETMD1-219ENST00000549395 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
LETMD1-219ENST00000549395 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
LETMD1-219ENST00000549395 MYO3AQ8NEV4 1616 aa12.85□□□□□ -0.35
LETMD1-219ENST00000549395 TOM1O60784 492 aa12.85□□□□□ -0.35
LETMD1-219ENST00000549395 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
LETMD1-219ENST00000549395 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
LETMD1-219ENST00000549395 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
LETMD1-219ENST00000549395 ZMYM3Q14202 1370 aa12.83□□□□□ -0.36
LETMD1-219ENST00000549395 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
LETMD1-219ENST00000549395 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-219ENST00000549395 KIDINS220Q9ULH0 1771 aa12.83□□□□□ -0.36
LETMD1-219ENST00000549395 CEP170BQ9Y4F5 1589 aaPredicted RBP12.82□□□□□ -0.36
LETMD1-219ENST00000549395 CLTCQ00610 1675 aaKnown RBP12.81□□□□□ -0.36
LETMD1-219ENST00000549395 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
LETMD1-219ENST00000549395 SENP3Q9H4L4 574 aaPredicted RBP12.8□□□□□ -0.36
LETMD1-219ENST00000549395 CPS1P31327 1500 aa12.79□□□□□ -0.36
LETMD1-219ENST00000549395 ABCC1P33527 1531 aa12.78□□□□□ -0.36
LETMD1-219ENST00000549395 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
LETMD1-219ENST00000549395 ALKQ9UM73 1620 aa12.77□□□□□ -0.36
LETMD1-219ENST00000549395 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
LETMD1-219ENST00000549395 TROQ12816 1431 aaPredicted RBP12.77□□□□□ -0.37
LETMD1-219ENST00000549395 PTPRKQ15262 1439 aa12.77□□□□□ -0.37
LETMD1-219ENST00000549395 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
LETMD1-219ENST00000549395 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-219ENST00000549395 DNMT1P26358 1616 aaKnown RBP12.75□□□□□ -0.37
LETMD1-219ENST00000549395 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
LETMD1-219ENST00000549395 CLIP1P30622 1438 aa12.74□□□□□ -0.37
LETMD1-219ENST00000549395 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
LETMD1-219ENST00000549395 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
LETMD1-219ENST00000549395 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
LETMD1-219ENST00000549395 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
LETMD1-219ENST00000549395 VWDEQ8N2E2 1590 aa12.71□□□□□ -0.37
LETMD1-219ENST00000549395 FMN1Q68DA7 1419 aa12.71□□□□□ -0.38
LETMD1-219ENST00000549395 GGT6Q6P531 493 aa12.7□□□□□ -0.38
LETMD1-219ENST00000549395 CDC42BPAQ5VT25 1732 aa12.7□□□□□ -0.38
LETMD1-219ENST00000549395 PLXNC1O60486 1568 aa12.68□□□□□ -0.38
LETMD1-219ENST00000549395 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
LETMD1-219ENST00000549395 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 A2MP01023 1474 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 POTEAQ6S8J7 498 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
LETMD1-219ENST00000549395 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 SYCP2Q9BX26 1530 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 HNRNPMP52272 730 aaKnown RBP eCLIP12.65□□□□□ -0.38
LETMD1-219ENST00000549395 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
LETMD1-219ENST00000549395 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
LETMD1-219ENST00000549395 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
LETMD1-219ENST00000549395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
LETMD1-219ENST00000549395 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
LETMD1-219ENST00000549395 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-219ENST00000549395 EEA1Q15075 1411 aa12.63□□□□□ -0.39
LETMD1-219ENST00000549395 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms